RNA–Protein interactions for RNA: ENST00000402697.5

PRAME-203, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRAME, Length 2,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-203ENST00000402697 THUMPD2Q9BTF0 503 aaKnown RBP16.31■□□□□ 0.2
PRAME-203ENST00000402697 SBNO1A3KN83 1393 aa16.31■□□□□ 0.2
PRAME-203ENST00000402697 C8orf58Q8NAV2 365 aa16.3■□□□□ 0.2
PRAME-203ENST00000402697 HTATSF1O43719 755 aaKnown RBP16.3■□□□□ 0.2
PRAME-203ENST00000402697 FLT4P35916 1363 aa16.3■□□□□ 0.2
PRAME-203ENST00000402697 SOS1Q07889 1333 aaPredicted RBP16.3■□□□□ 0.2
PRAME-203ENST00000402697 KDRP35968 1356 aa16.29■□□□□ 0.2
PRAME-203ENST00000402697 SNX21Q969T3 373 aa16.29■□□□□ 0.2
PRAME-203ENST00000402697 RPAP2Q8IXW5 612 aaPredicted RBP16.28■□□□□ 0.2
PRAME-203ENST00000402697 FRAT2O75474 233 aaPredicted RBP16.28■□□□□ 0.2
PRAME-203ENST00000402697 SOX12O15370 315 aa16.27■□□□□ 0.2
PRAME-203ENST00000402697 LNPKQ9C0E8 428 aa16.27■□□□□ 0.2
PRAME-203ENST00000402697 MFAP1P55081 439 aaKnown RBP16.26■□□□□ 0.19
PRAME-203ENST00000402697 ANKRD45Q5TZF3 282 aa16.26■□□□□ 0.19
PRAME-203ENST00000402697 GAS2L2Q8NHY3 880 aa16.26■□□□□ 0.19
PRAME-203ENST00000402697 HSP90AB2PQ58FF8 381 aa16.26■□□□□ 0.19
PRAME-203ENST00000402697 AEBP1Q8IUX7 1158 aa16.26■□□□□ 0.19
PRAME-203ENST00000402697 HSCBQ8IWL3 235 aa16.26■□□□□ 0.19
PRAME-203ENST00000402697 DCTPP1Q9H773 170 aa16.26■□□□□ 0.19
PRAME-203ENST00000402697 CHMP5Q9NZZ3 219 aa16.26■□□□□ 0.19
PRAME-203ENST00000402697 CRB1P82279 1406 aa16.26■□□□□ 0.19
PRAME-203ENST00000402697 BABAM1Q9NWV8 329 aa16.25■□□□□ 0.19
PRAME-203ENST00000402697 PHF8Q9UPP1 1060 aa16.25■□□□□ 0.19
PRAME-203ENST00000402697 MAP3K19Q56UN5 1328 aa16.25■□□□□ 0.19
PRAME-203ENST00000402697 FAM83GA6ND36 823 aa16.24■□□□□ 0.19
PRAME-203ENST00000402697 RTF1Q92541 710 aaKnown RBP16.24■□□□□ 0.19
PRAME-203ENST00000402697 LTN1O94822 1766 aa16.24■□□□□ 0.19
PRAME-203ENST00000402697 IGSF1Q8N6C5 1336 aa16.24■□□□□ 0.19
PRAME-203ENST00000402697 ELL2O00472 640 aaPredicted RBP16.23■□□□□ 0.19
PRAME-203ENST00000402697 SIRT2Q8IXJ6 389 aa16.23■□□□□ 0.19
PRAME-203ENST00000402697 ANKRD44Q8N8A2 993 aa16.23■□□□□ 0.19
PRAME-203ENST00000402697 CACNA1FO60840 1977 aa16.23■□□□□ 0.19
PRAME-203ENST00000402697 CIZ1Q9ULV3 898 aaPredicted RBP16.23■□□□□ 0.19
PRAME-203ENST00000402697 RTL1A6NKG5 1358 aa16.23■□□□□ 0.19
PRAME-203ENST00000402697 KIF1AQ12756 1690 aa16.23■□□□□ 0.19
PRAME-203ENST00000402697 LMTK3Q96Q04 1460 aa16.22■□□□□ 0.19
PRAME-203ENST00000402697 RGS12O14924 1447 aa16.22■□□□□ 0.19
PRAME-203ENST00000402697 NCOA3Q9Y6Q9 1424 aa16.22■□□□□ 0.19
PRAME-203ENST00000402697 TRPM3Q9HCF6 1732 aaPredicted RBP16.22■□□□□ 0.19
PRAME-203ENST00000402697 STRCQ7RTU9 1775 aa16.22■□□□□ 0.19
PRAME-203ENST00000402697 CDC45O75419 566 aa16.21■□□□□ 0.19
PRAME-203ENST00000402697 DCTN1Q14203 1278 aa16.21■□□□□ 0.19
PRAME-203ENST00000402697 SLKQ9H2G2 1235 aaPredicted RBP16.21■□□□□ 0.19
PRAME-203ENST00000402697 NLRP6P59044 892 aa16.2■□□□□ 0.18
PRAME-203ENST00000402697 NUTM2GQ5VZR2 741 aa16.2■□□□□ 0.18
PRAME-203ENST00000402697 C14orf37Q86TY3 774 aa16.2■□□□□ 0.18
PRAME-203ENST00000402697 NFAT5O94916 1531 aa16.2■□□□□ 0.18
PRAME-203ENST00000402697 HMMRO75330 724 aa16.2■□□□□ 0.18
PRAME-203ENST00000402697 CCT4P50991 539 aaKnown RBP16.2■□□□□ 0.18
PRAME-203ENST00000402697 CHMP4AQ9BY43 222 aa16.2■□□□□ 0.18
PRAME-203ENST00000402697 XIRP1Q702N8 1843 aaKnown RBP16.19■□□□□ 0.18
PRAME-203ENST00000402697 KDM4FA0A1W2PPD8 638 aa16.19■□□□□ 0.18
PRAME-203ENST00000402697 AMPHP49418 695 aa16.19■□□□□ 0.18
PRAME-203ENST00000402697 ESCO1Q5FWF5 840 aa16.19■□□□□ 0.18
PRAME-203ENST00000402697 PROSER2Q86WR7 435 aaPredicted RBP16.19■□□□□ 0.18
PRAME-203ENST00000402697 LRRC37A3O60309 1634 aa16.19■□□□□ 0.18
PRAME-203ENST00000402697 ATP10DQ9P241 1426 aa16.19■□□□□ 0.18
PRAME-203ENST00000402697 PTMSP20962 102 aa16.18■□□□□ 0.18
PRAME-203ENST00000402697 HSPA2P54652 639 aa16.18■□□□□ 0.18
PRAME-203ENST00000402697 PHRF1Q9P1Y6 1649 aaKnown RBP16.18■□□□□ 0.18
PRAME-203ENST00000402697 MCM10Q7L590 875 aa16.18■□□□□ 0.18
PRAME-203ENST00000402697 ABTB2Q8N961 1025 aa16.18■□□□□ 0.18
PRAME-203ENST00000402697 C1orf167Q5SNV9 1468 aa16.18■□□□□ 0.18
PRAME-203ENST00000402697 C1orf115Q9H7X2 142 aa16.17■□□□□ 0.18
PRAME-203ENST00000402697 MTHFSDQ2M296 383 aaKnown RBP16.17■□□□□ 0.18
PRAME-203ENST00000402697 L1TD1Q5T7N2 865 aaKnown RBP16.17■□□□□ 0.18
PRAME-203ENST00000402697 CEP85Q6P2H3 762 aa16.17■□□□□ 0.18
PRAME-203ENST00000402697 TBC1D9Q6ZT07 1266 aa16.17■□□□□ 0.18
PRAME-203ENST00000402697 PLEKHM2Q8IWE5 1019 aa16.17■□□□□ 0.18
PRAME-203ENST00000402697 ORAI2Q96SN7 254 aa16.17■□□□□ 0.18
PRAME-203ENST00000402697 TSPYL4Q9UJ04 414 aa16.17■□□□□ 0.18
PRAME-203ENST00000402697 DCCP43146 1447 aa16.16■□□□□ 0.18
PRAME-203ENST00000402697 TMEM94Q12767 1356 aa16.16■□□□□ 0.18
PRAME-203ENST00000402697 DDX11L8A8MPP1 907 aa16.15■□□□□ 0.18
PRAME-203ENST00000402697 MCM4P33991 863 aa16.15■□□□□ 0.18
PRAME-203ENST00000402697 CASC1Q6TDU7 716 aa16.15■□□□□ 0.18
PRAME-203ENST00000402697 EYA1Q99502 592 aa16.15■□□□□ 0.18
PRAME-203ENST00000402697 SLC4A2P04920 1241 aa16.15■□□□□ 0.18
PRAME-203ENST00000402697 DDIT3P35638 169 aa16.15■□□□□ 0.18
PRAME-203ENST00000402697 TTC22Q5TAA0 569 aa16.15■□□□□ 0.18
PRAME-203ENST00000402697 STK31Q9BXU1 1019 aa16.15■□□□□ 0.18
PRAME-203ENST00000402697 C19orf44Q9H6X5 657 aa16.15■□□□□ 0.18
PRAME-203ENST00000402697 MST1RQ04912 1400 aa16.15■□□□□ 0.18
PRAME-203ENST00000402697 ALS2Q96Q42 1657 aa16.15■□□□□ 0.18
PRAME-203ENST00000402697 CCDC30Q5VVM6 783 aa16.14■□□□□ 0.17
PRAME-203ENST00000402697 SLIT3O75094 1523 aa16.14■□□□□ 0.17
PRAME-203ENST00000402697 GNAT3A8MTJ3 354 aa16.14■□□□□ 0.17
PRAME-203ENST00000402697 HOXC9P31274 260 aa16.14■□□□□ 0.17
PRAME-203ENST00000402697 PXDNLA1KZ92 1463 aa16.13■□□□□ 0.17
PRAME-203ENST00000402697 MSH6P52701 1360 aa16.13■□□□□ 0.17
PRAME-203ENST00000402697 PSME1Q06323 249 aa16.13■□□□□ 0.17
PRAME-203ENST00000402697 IL27Q8NEV9 243 aa16.13■□□□□ 0.17
PRAME-203ENST00000402697 N4BP2Q86UW6 1770 aaPredicted RBP16.13■□□□□ 0.17
PRAME-203ENST00000402697 OSBPL3Q9H4L5 887 aa16.12■□□□□ 0.17
PRAME-203ENST00000402697 ISY1Q9ULR0 285 aaKnown RBP16.12■□□□□ 0.17
PRAME-203ENST00000402697 GNAI3P08754 354 aa16.12■□□□□ 0.17
PRAME-203ENST00000402697 RABEP1Q15276 862 aa16.12■□□□□ 0.17
PRAME-203ENST00000402697 MAP3K5Q99683 1374 aa16.11■□□□□ 0.17
PRAME-203ENST00000402697 FOXO3O43524 673 aa16.11■□□□□ 0.17
PRAME-203ENST00000402697 HSP90AB1P08238 724 aaKnown RBP16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms