RNA–Protein interactions for RNA: ENST00000400017.6

RPGRIP1-202, Transcript of RPGR interacting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RPGRIP1, Length 3,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1-202ENST00000400017 ERBB4Q15303 1308 aa16.49■□□□□ 0.23
RPGRIP1-202ENST00000400017 FOXO3O43524 673 aa16.48■□□□□ 0.23
RPGRIP1-202ENST00000400017 DNTTIP2Q5QJE6 756 aaKnown RBP16.48■□□□□ 0.23
RPGRIP1-202ENST00000400017 NGDNQ8NEJ9 315 aaKnown RBP16.48■□□□□ 0.23
RPGRIP1-202ENST00000400017 LMTK2Q8IWU2 1503 aa16.48■□□□□ 0.23
RPGRIP1-202ENST00000400017 MLH3Q9UHC1 1453 aa16.48■□□□□ 0.23
RPGRIP1-202ENST00000400017 EIF4A2Q14240 407 aaKnown RBP16.48■□□□□ 0.23
RPGRIP1-202ENST00000400017 UPF3BQ9BZI7 483 aaKnown RBP16.47■□□□□ 0.23
RPGRIP1-202ENST00000400017 SYCE3A1L190 88 aa16.47■□□□□ 0.23
RPGRIP1-202ENST00000400017 KIAA1211Q6ZU35 1233 aa16.47■□□□□ 0.23
RPGRIP1-202ENST00000400017 MYO3AQ8NEV4 1616 aa16.46■□□□□ 0.23
RPGRIP1-202ENST00000400017 MAP4K4O95819 1239 aaPredicted RBP16.46■□□□□ 0.23
RPGRIP1-202ENST00000400017 VIRMAQ69YN4 1812 aaKnown RBP16.46■□□□□ 0.23
RPGRIP1-202ENST00000400017 LRRC7Q96NW7 1537 aa16.46■□□□□ 0.23
RPGRIP1-202ENST00000400017 OS9Q13438 667 aaPredicted RBP16.46■□□□□ 0.23
RPGRIP1-202ENST00000400017 ZSCAN23Q3MJ62 389 aa16.46■□□□□ 0.23
RPGRIP1-202ENST00000400017 FAM135BQ49AJ0 1406 aa16.46■□□□□ 0.23
RPGRIP1-202ENST00000400017 RIMS2Q9UQ26 1411 aa16.46■□□□□ 0.23
RPGRIP1-202ENST00000400017 HDGFP51858 240 aaKnown RBP16.46■□□□□ 0.22
RPGRIP1-202ENST00000400017 G2E3Q7L622 706 aa16.46■□□□□ 0.22
RPGRIP1-202ENST00000400017 IL1RAPL2Q9NP60 686 aa16.46■□□□□ 0.22
RPGRIP1-202ENST00000400017 MSH6P52701 1360 aa16.46■□□□□ 0.22
RPGRIP1-202ENST00000400017 CAMSAP1Q5T5Y3 1602 aa16.45■□□□□ 0.22
RPGRIP1-202ENST00000400017 UBE2Q2Q8WVN8 375 aa16.45■□□□□ 0.22
RPGRIP1-202ENST00000400017 R3HCC1Q9Y3T6 440 aaKnown RBP16.45■□□□□ 0.22
RPGRIP1-202ENST00000400017 PNPLA6Q8IY17 1366 aa16.45■□□□□ 0.22
RPGRIP1-202ENST00000400017 GNAI2P04899 355 aa16.45■□□□□ 0.22
RPGRIP1-202ENST00000400017 ZNF853P0CG23 659 aa16.45■□□□□ 0.22
RPGRIP1-202ENST00000400017 PPLO60437 1756 aa16.44■□□□□ 0.22
RPGRIP1-202ENST00000400017 NEURL4Q96JN8 1562 aa16.44■□□□□ 0.22
RPGRIP1-202ENST00000400017 EIF2S2P20042 333 aaKnown RBP16.44■□□□□ 0.22
RPGRIP1-202ENST00000400017 BRPF1P55201 1214 aaPredicted RBP16.44■□□□□ 0.22
RPGRIP1-202ENST00000400017 ZSCAN30Q86W11 494 aa16.44■□□□□ 0.22
RPGRIP1-202ENST00000400017 CWC22Q9HCG8 908 aaKnown RBP16.44■□□□□ 0.22
RPGRIP1-202ENST00000400017 RBM10P98175 930 aaKnown RBP16.44■□□□□ 0.22
RPGRIP1-202ENST00000400017 GDPD2Q9HCC8 539 aa16.44■□□□□ 0.22
RPGRIP1-202ENST00000400017 DDIT3P35638 169 aa16.43■□□□□ 0.22
RPGRIP1-202ENST00000400017 PRIM1P49642 420 aaKnown RBP16.43■□□□□ 0.22
RPGRIP1-202ENST00000400017 HECW2Q9P2P5 1572 aa16.43■□□□□ 0.22
RPGRIP1-202ENST00000400017 NEXMIFQ5QGS0 1516 aa16.43■□□□□ 0.22
RPGRIP1-202ENST00000400017 SLC26A8Q96RN1 970 aa16.43■□□□□ 0.22
RPGRIP1-202ENST00000400017 LRRCC1Q9C099 1032 aa16.42■□□□□ 0.22
RPGRIP1-202ENST00000400017 COL3A1P02461 1466 aaPredicted RBP16.42■□□□□ 0.22
RPGRIP1-202ENST00000400017 PDE1AP54750 535 aa16.42■□□□□ 0.22
RPGRIP1-202ENST00000400017 ADGRB2O60241 1585 aa16.42■□□□□ 0.22
RPGRIP1-202ENST00000400017 LARP6Q9BRS8 491 aaKnown RBP16.42■□□□□ 0.22
RPGRIP1-202ENST00000400017 FAM13BQ9NYF5 915 aa16.42■□□□□ 0.22
RPGRIP1-202ENST00000400017 ZC3H13Q5T200 1668 aaKnown RBP16.42■□□□□ 0.22
RPGRIP1-202ENST00000400017 PTPRMP28827 1452 aa16.41■□□□□ 0.22
RPGRIP1-202ENST00000400017 XPCQ01831 940 aaPredicted RBP16.41■□□□□ 0.22
RPGRIP1-202ENST00000400017 CCT4P50991 539 aaKnown RBP16.4■□□□□ 0.22
RPGRIP1-202ENST00000400017 TMX3Q96JJ7 454 aa16.4■□□□□ 0.22
RPGRIP1-202ENST00000400017 RBSNQ9H1K0 784 aa16.4■□□□□ 0.22
RPGRIP1-202ENST00000400017 PTCH1Q13635 1447 aa16.4■□□□□ 0.22
RPGRIP1-202ENST00000400017 IFT172Q9UG01 1749 aa16.4■□□□□ 0.22
RPGRIP1-202ENST00000400017 ACEP12821 1306 aa16.4■□□□□ 0.22
RPGRIP1-202ENST00000400017 NUTM1Q86Y26 1132 aa16.4■□□□□ 0.22
RPGRIP1-202ENST00000400017 LMBRD1Q9NUN5 540 aa16.4■□□□□ 0.22
RPGRIP1-202ENST00000400017 CHL1O00533 1208 aa16.39■□□□□ 0.21
RPGRIP1-202ENST00000400017 MX1P20591 662 aa16.39■□□□□ 0.21
RPGRIP1-202ENST00000400017 FRMPD1Q5SYB0 1578 aa16.39■□□□□ 0.21
RPGRIP1-202ENST00000400017 CD163L1Q9NR16 1453 aa16.39■□□□□ 0.21
RPGRIP1-202ENST00000400017 PTPRCP08575 1304 aa16.39■□□□□ 0.21
RPGRIP1-202ENST00000400017 SURF6O75683 361 aaKnown RBP16.39■□□□□ 0.21
RPGRIP1-202ENST00000400017 ARHGEF28Q8N1W1 1705 aaKnown RBP16.39■□□□□ 0.21
RPGRIP1-202ENST00000400017 EDC4Q6P2E9 1401 aaKnown RBP16.38■□□□□ 0.21
RPGRIP1-202ENST00000400017 UBTFL1P0CB47 393 aaPredicted RBP16.38■□□□□ 0.21
RPGRIP1-202ENST00000400017 MTHFSDQ2M296 383 aaKnown RBP16.38■□□□□ 0.21
RPGRIP1-202ENST00000400017 LRRFIP2Q9Y608 721 aaKnown RBP16.38■□□□□ 0.21
RPGRIP1-202ENST00000400017 NCOA3Q9Y6Q9 1424 aa16.38■□□□□ 0.21
RPGRIP1-202ENST00000400017 RTL1A6NKG5 1358 aa16.38■□□□□ 0.21
RPGRIP1-202ENST00000400017 TTC21BQ7Z4L5 1316 aa16.38■□□□□ 0.21
RPGRIP1-202ENST00000400017 DTNBO60941 627 aa16.38■□□□□ 0.21
RPGRIP1-202ENST00000400017 KCNJ4P48050 445 aa16.38■□□□□ 0.21
RPGRIP1-202ENST00000400017 SYAP1Q96A49 352 aaPredicted RBP16.38■□□□□ 0.21
RPGRIP1-202ENST00000400017 GNAI3P08754 354 aa16.37■□□□□ 0.21
RPGRIP1-202ENST00000400017 NLRP6P59044 892 aa16.37■□□□□ 0.21
RPGRIP1-202ENST00000400017 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.37■□□□□ 0.21
RPGRIP1-202ENST00000400017 USP32Q8NFA0 1604 aa16.37■□□□□ 0.21
RPGRIP1-202ENST00000400017 FLIIQ13045 1269 aa16.36■□□□□ 0.21
RPGRIP1-202ENST00000400017 CCDC30Q5VVM6 783 aa16.36■□□□□ 0.21
RPGRIP1-202ENST00000400017 METP08581 1390 aa16.35■□□□□ 0.21
RPGRIP1-202ENST00000400017 RRP9O43818 475 aaKnown RBP16.35■□□□□ 0.21
RPGRIP1-202ENST00000400017 MED14O60244 1454 aa16.35■□□□□ 0.21
RPGRIP1-202ENST00000400017 MBD3O95983 291 aa16.35■□□□□ 0.21
RPGRIP1-202ENST00000400017 GPT2Q8TD30 523 aa16.35■□□□□ 0.21
RPGRIP1-202ENST00000400017 ESYT1Q9BSJ8 1104 aa16.35■□□□□ 0.21
RPGRIP1-202ENST00000400017 CHMP3Q9Y3E7 222 aa16.35■□□□□ 0.21
RPGRIP1-202ENST00000400017 PALD1Q9ULE6 856 aa16.34■□□□□ 0.21
RPGRIP1-202ENST00000400017 PNMA6EA0A0J9YXQ4 647 aa16.34■□□□□ 0.21
RPGRIP1-202ENST00000400017 TPM2P07951 284 aa16.34■□□□□ 0.21
RPGRIP1-202ENST00000400017 LMOD2Q6P5Q4 547 aa16.34■□□□□ 0.21
RPGRIP1-202ENST00000400017 TMEM63CQ9P1W3 806 aa16.34■□□□□ 0.21
RPGRIP1-202ENST00000400017 ARHGEF40Q8TER5 1519 aa16.34■□□□□ 0.21
RPGRIP1-202ENST00000400017 PIK3C2BO00750 1634 aa16.33■□□□□ 0.21
RPGRIP1-202ENST00000400017 AK9Q5TCS8 1911 aa16.33■□□□□ 0.21
RPGRIP1-202ENST00000400017 HDGFL1Q5TGJ6 251 aa16.33■□□□□ 0.21
RPGRIP1-202ENST00000400017 USHBP1Q8N6Y0 703 aa16.33■□□□□ 0.21
RPGRIP1-202ENST00000400017 NSFL1CQ9UNZ2 370 aaKnown RBP16.33■□□□□ 0.21
RPGRIP1-202ENST00000400017 PIK3R4Q99570 1358 aa16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms