RNA–Protein interactions for RNA: ENST00000399516.7

LAMA3-203, Transcript of laminin subunit alpha 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA3, Length 9,834 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-203ENST00000399516 CGNQ9P2M7 1197 aaKnown RBP13.22□□□□□ -0.29
LAMA3-203ENST00000399516 MAPK8IP2Q13387 824 aaPredicted RBP13.22□□□□□ -0.29
LAMA3-203ENST00000399516 CCDC148Q8NFR7 591 aa13.22□□□□□ -0.29
LAMA3-203ENST00000399516 TAX1BP1Q86VP1 789 aa13.22□□□□□ -0.29
LAMA3-203ENST00000399516 PCF11O94913 1555 aaKnown RBP13.21□□□□□ -0.29
LAMA3-203ENST00000399516 XPCQ01831 940 aaPredicted RBP13.21□□□□□ -0.29
LAMA3-203ENST00000399516 KIAA1328Q86T90 577 aa13.21□□□□□ -0.29
LAMA3-203ENST00000399516 LRRFIP2Q9Y608 721 aaKnown RBP13.21□□□□□ -0.29
LAMA3-203ENST00000399516 NSD3Q9BZ95 1437 aa13.21□□□□□ -0.29
LAMA3-203ENST00000399516 CNNM1Q9NRU3 951 aa13.21□□□□□ -0.29
LAMA3-203ENST00000399516 PRAM1Q96QH2 718 aa13.21□□□□□ -0.3
LAMA3-203ENST00000399516 NUP133Q8WUM0 1156 aa13.21□□□□□ -0.3
LAMA3-203ENST00000399516 ZSCAN12O43309 604 aa13.2□□□□□ -0.3
LAMA3-203ENST00000399516 NEFHP12036 1026 aa13.2□□□□□ -0.3
LAMA3-203ENST00000399516 SLFN5Q08AF3 891 aa13.2□□□□□ -0.3
LAMA3-203ENST00000399516 PTPN14Q15678 1187 aa13.2□□□□□ -0.3
LAMA3-203ENST00000399516 TMEM57Q8N5G2 664 aa13.2□□□□□ -0.3
LAMA3-203ENST00000399516 CFAP100Q494V2 611 aa13.2□□□□□ -0.3
LAMA3-203ENST00000399516 FAM135AQ9P2D6 1515 aa13.2□□□□□ -0.3
LAMA3-203ENST00000399516 CCDC141Q6ZP82 1450 aa13.2□□□□□ -0.3
LAMA3-203ENST00000399516 SRGAP3O43295 1099 aa13.2□□□□□ -0.3
LAMA3-203ENST00000399516 ABTB2Q8N961 1025 aa13.2□□□□□ -0.3
LAMA3-203ENST00000399516 CLIP2Q9UDT6 1046 aa13.2□□□□□ -0.3
LAMA3-203ENST00000399516 TMEM132AQ24JP5 1023 aa13.2□□□□□ -0.3
LAMA3-203ENST00000399516 CCDC184Q52MB2 194 aa13.2□□□□□ -0.3
LAMA3-203ENST00000399516 MX1P20591 662 aa13.2□□□□□ -0.3
LAMA3-203ENST00000399516 WASF1Q92558 559 aa13.2□□□□□ -0.3
LAMA3-203ENST00000399516 SHTN1A0MZ66 631 aa13.2□□□□□ -0.3
LAMA3-203ENST00000399516 CBX1P83916 185 aa13.2□□□□□ -0.3
LAMA3-203ENST00000399516 GBP3Q9H0R5 595 aa13.19□□□□□ -0.3
LAMA3-203ENST00000399516 ZNF428Q96B54 188 aa13.19□□□□□ -0.3
LAMA3-203ENST00000399516 SULT6B1Q6IMI4 303 aa13.19□□□□□ -0.3
LAMA3-203ENST00000399516 KIF18AQ8NI77 898 aa13.19□□□□□ -0.3
LAMA3-203ENST00000399516 SEPT11Q9NVA2 429 aaKnown RBP13.19□□□□□ -0.3
LAMA3-203ENST00000399516 ZSCAN25Q6NSZ9 544 aa13.19□□□□□ -0.3
LAMA3-203ENST00000399516 MAP9Q49MG5 647 aa13.19□□□□□ -0.3
LAMA3-203ENST00000399516 TNPO1Q92973 898 aaKnown RBP13.19□□□□□ -0.3
LAMA3-203ENST00000399516 CCDC57Q2TAC2 916 aa13.18□□□□□ -0.3
LAMA3-203ENST00000399516 AQRO60306 1485 aaKnown RBP eCLIP13.18□□□□□ -0.3
LAMA3-203ENST00000399516 CTNNA3Q9UI47 895 aa13.18□□□□□ -0.3
LAMA3-203ENST00000399516 CASQ1P31415 396 aa13.18□□□□□ -0.3
LAMA3-203ENST00000399516 STK11IPQ8N1F8 1099 aa13.18□□□□□ -0.3
LAMA3-203ENST00000399516 CRACR2AQ9BSW2 395 aa13.18□□□□□ -0.3
LAMA3-203ENST00000399516 EZRP15311 586 aaKnown RBP13.18□□□□□ -0.3
LAMA3-203ENST00000399516 GBP2P32456 591 aaPredicted RBP13.18□□□□□ -0.3
LAMA3-203ENST00000399516 TAF4BQ92750 862 aa13.18□□□□□ -0.3
LAMA3-203ENST00000399516 ANKRD62A6NC57 917 aa13.17□□□□□ -0.3
LAMA3-203ENST00000399516 ATF3P18847 181 aa13.17□□□□□ -0.3
LAMA3-203ENST00000399516 EIF5P55010 431 aaKnown RBP13.17□□□□□ -0.3
LAMA3-203ENST00000399516 SCAND2PQ9GZW5 306 aaPredicted RBP13.17□□□□□ -0.3
LAMA3-203ENST00000399516 LRPPRCP42704 1394 aaKnown RBP13.17□□□□□ -0.3
LAMA3-203ENST00000399516 GRIN2BQ13224 1484 aa13.17□□□□□ -0.3
LAMA3-203ENST00000399516 GIMAP7Q8NHV1 300 aa13.17□□□□□ -0.3
LAMA3-203ENST00000399516 DHX37Q8IY37 1157 aaKnown RBP13.17□□□□□ -0.3
LAMA3-203ENST00000399516 DDX11Q96FC9 970 aa13.17□□□□□ -0.3
LAMA3-203ENST00000399516 UBAC1Q9BSL1 405 aa13.17□□□□□ -0.3
LAMA3-203ENST00000399516 SLC12A5Q9H2X9 1139 aa13.17□□□□□ -0.3
LAMA3-203ENST00000399516 SH2B1Q9NRF2 756 aaPredicted RBP13.17□□□□□ -0.3
LAMA3-203ENST00000399516 KIF5CO60282 957 aa13.17□□□□□ -0.3
LAMA3-203ENST00000399516 JAKMIP3Q5VZ66 844 aa13.16□□□□□ -0.3
LAMA3-203ENST00000399516 CEP131Q9UPN4 1083 aa13.16□□□□□ -0.3
LAMA3-203ENST00000399516 MCM3P25205 808 aa13.16□□□□□ -0.3
LAMA3-203ENST00000399516 SSFA2P28290 1259 aa13.16□□□□□ -0.3
LAMA3-203ENST00000399516 MCM5P33992 734 aa13.16□□□□□ -0.3
LAMA3-203ENST00000399516 CDK19Q9BWU1 502 aa13.16□□□□□ -0.3
LAMA3-203ENST00000399516 ZHX3Q9H4I2 956 aa13.16□□□□□ -0.3
LAMA3-203ENST00000399516 ZNF397Q8NF99 534 aaPredicted RBP13.16□□□□□ -0.3
LAMA3-203ENST00000399516 ATAD2Q6PL18 1390 aa13.16□□□□□ -0.3
LAMA3-203ENST00000399516 PRPF40BQ6NWY9 871 aaKnown RBP13.16□□□□□ -0.3
LAMA3-203ENST00000399516 RPAP2Q8IXW5 612 aaPredicted RBP13.16□□□□□ -0.3
LAMA3-203ENST00000399516 PDCL3Q9H2J4 239 aa13.16□□□□□ -0.3
LAMA3-203ENST00000399516 FKBP4Q02790 459 aaKnown RBP eCLIP13.16□□□□□ -0.3
LAMA3-203ENST00000399516 SLC26A8Q96RN1 970 aa13.16□□□□□ -0.3
LAMA3-203ENST00000399516 NUTM1Q86Y26 1132 aa13.16□□□□□ -0.3
LAMA3-203ENST00000399516 C16orf45Q96MC5 204 aaPredicted RBP13.16□□□□□ -0.3
LAMA3-203ENST00000399516 TBC1D2Q9BYX2 928 aa13.16□□□□□ -0.3
LAMA3-203ENST00000399516 ZNF530Q6P9A1 599 aaPredicted RBP13.15□□□□□ -0.3
LAMA3-203ENST00000399516 FERMT3Q86UX7 667 aa13.15□□□□□ -0.3
LAMA3-203ENST00000399516 ANO10Q9NW15 660 aa13.15□□□□□ -0.3
LAMA3-203ENST00000399516 C20orf194Q5TEA3 1177 aa13.15□□□□□ -0.3
LAMA3-203ENST00000399516 IMMTQ16891 758 aaKnown RBP13.15□□□□□ -0.3
LAMA3-203ENST00000399516 CCDC83Q8IWF9 413 aa13.15□□□□□ -0.3
LAMA3-203ENST00000399516 CALCOCO1Q9P1Z2 691 aa13.15□□□□□ -0.3
LAMA3-203ENST00000399516 FCHSD2O94868 740 aa13.15□□□□□ -0.3
LAMA3-203ENST00000399516 SOGA3Q5TF21 947 aa13.15□□□□□ -0.3
LAMA3-203ENST00000399516 RTEL1-TNFRSF6BF6WH68 1400 aa13.15□□□□□ -0.3
LAMA3-203ENST00000399516 IL1RAPL2Q9NP60 686 aa13.14□□□□□ -0.31
LAMA3-203ENST00000399516 CABP1Q9NZU7 370 aa13.14□□□□□ -0.31
LAMA3-203ENST00000399516 TDO2P48775 406 aa13.14□□□□□ -0.31
LAMA3-203ENST00000399516 SPA17Q15506 151 aa13.14□□□□□ -0.31
LAMA3-203ENST00000399516 FAM177BA6PVY3 158 aa13.14□□□□□ -0.31
LAMA3-203ENST00000399516 PPP4R3BQ5MIZ7 849 aa13.14□□□□□ -0.31
LAMA3-203ENST00000399516 NEMFO60524 1076 aa13.14□□□□□ -0.31
LAMA3-203ENST00000399516 MEX3CQ5U5Q3 659 aaKnown RBP13.14□□□□□ -0.31
LAMA3-203ENST00000399516 USP25Q9UHP3 1055 aa13.13□□□□□ -0.31
LAMA3-203ENST00000399516 ABCC11Q96J66 1382 aa13.13□□□□□ -0.31
LAMA3-203ENST00000399516 TOP1P11387 765 aaKnown RBP13.13□□□□□ -0.31
LAMA3-203ENST00000399516 MYL6BP14649 208 aa13.13□□□□□ -0.31
LAMA3-203ENST00000399516 ALDH1L2Q3SY69 923 aa13.13□□□□□ -0.31
LAMA3-203ENST00000399516 TROQ12816 1431 aaPredicted RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms