RNA–Protein interactions for RNA: ENST00000399127.5

COL25A1-202, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-202ENST00000399127 LTV1Q96GA3 475 aaPredicted RBP14.94□□□□□ -0.02
COL25A1-202ENST00000399127 EYA1Q99502 592 aa14.93□□□□□ -0.02
COL25A1-202ENST00000399127 MIS18AQ9NYP9 233 aa14.93□□□□□ -0.02
COL25A1-202ENST00000399127 RGPD1P0DJD0 1748 aa14.93□□□□□ -0.02
COL25A1-202ENST00000399127 MTHFSDQ2M296 383 aaKnown RBP14.92□□□□□ -0.02
COL25A1-202ENST00000399127 ZNF428Q96B54 188 aa14.92□□□□□ -0.02
COL25A1-202ENST00000399127 ZBTB40Q9NUA8 1239 aa14.92□□□□□ -0.02
COL25A1-202ENST00000399127 C1orf115Q9H7X2 142 aa14.91□□□□□ -0.02
COL25A1-202ENST00000399127 STRCP1A6NGW2 1772 aa14.9□□□□□ -0.02
COL25A1-202ENST00000399127 ARHGEF10O15013 1369 aa14.9□□□□□ -0.02
COL25A1-202ENST00000399127 ZNF335Q9H4Z2 1342 aaPredicted RBP14.9□□□□□ -0.02
COL25A1-202ENST00000399127 ZBTB7CA1YPR0 619 aa14.9□□□□□ -0.02
COL25A1-202ENST00000399127 RTL5Q5HYW3 569 aaPredicted RBP14.9□□□□□ -0.02
COL25A1-202ENST00000399127 SEC24BO95487 1268 aa14.9□□□□□ -0.02
COL25A1-202ENST00000399127 HOXC9P31274 260 aa14.9□□□□□ -0.02
COL25A1-202ENST00000399127 SLC4A3P48751 1232 aa14.89□□□□□ -0.03
COL25A1-202ENST00000399127 BRPF1P55201 1214 aaPredicted RBP14.89□□□□□ -0.03
COL25A1-202ENST00000399127 IGSF1Q8N6C5 1336 aa14.88□□□□□ -0.03
COL25A1-202ENST00000399127 STRCQ7RTU9 1775 aa14.88□□□□□ -0.03
COL25A1-202ENST00000399127 CHL1O00533 1208 aa14.88□□□□□ -0.03
COL25A1-202ENST00000399127 KRT28Q7Z3Y7 464 aa14.88□□□□□ -0.03
COL25A1-202ENST00000399127 USHBP1Q8N6Y0 703 aa14.88□□□□□ -0.03
COL25A1-202ENST00000399127 MARF1Q9Y4F3 1742 aaKnown RBP14.88□□□□□ -0.03
COL25A1-202ENST00000399127 C1orf167Q5SNV9 1468 aa14.88□□□□□ -0.03
COL25A1-202ENST00000399127 HDAC1Q13547 482 aaPredicted RBP14.88□□□□□ -0.03
COL25A1-202ENST00000399127 RTF1Q92541 710 aaKnown RBP14.88□□□□□ -0.03
COL25A1-202ENST00000399127 DDX17Q92841 729 aaKnown RBP14.88□□□□□ -0.03
COL25A1-202ENST00000399127 KDRP35968 1356 aa14.87□□□□□ -0.03
COL25A1-202ENST00000399127 MSH6P52701 1360 aa14.87□□□□□ -0.03
COL25A1-202ENST00000399127 ZBTB7BO15156 539 aaPredicted RBP14.87□□□□□ -0.03
COL25A1-202ENST00000399127 CADPS2Q86UW7 1296 aa14.87□□□□□ -0.03
COL25A1-202ENST00000399127 ARHGAP45Q92619 1136 aa14.87□□□□□ -0.03
COL25A1-202ENST00000399127 CRB1P82279 1406 aa14.85□□□□□ -0.03
COL25A1-202ENST00000399127 ABCC4O15439 1325 aa14.85□□□□□ -0.03
COL25A1-202ENST00000399127 TSPYL4Q9UJ04 414 aa14.85□□□□□ -0.03
COL25A1-202ENST00000399127 DDRGK1Q96HY6 314 aa14.84□□□□□ -0.03
COL25A1-202ENST00000399127 MST1RQ04912 1400 aa14.84□□□□□ -0.03
COL25A1-202ENST00000399127 SMC5Q8IY18 1101 aa14.84□□□□□ -0.03
COL25A1-202ENST00000399127 VIRMAQ69YN4 1812 aaKnown RBP14.83□□□□□ -0.04
COL25A1-202ENST00000399127 API5Q9BZZ5 524 aaKnown RBP14.83□□□□□ -0.04
COL25A1-202ENST00000399127 GAS2L2Q8NHY3 880 aa14.83□□□□□ -0.04
COL25A1-202ENST00000399127 LNPKQ9C0E8 428 aa14.83□□□□□ -0.04
COL25A1-202ENST00000399127 USP19O94966 1318 aa14.82□□□□□ -0.04
COL25A1-202ENST00000399127 NCOA3Q9Y6Q9 1424 aa14.82□□□□□ -0.04
COL25A1-202ENST00000399127 LTN1O94822 1766 aa14.81□□□□□ -0.04
COL25A1-202ENST00000399127 SLC4A2P04920 1241 aa14.81□□□□□ -0.04
COL25A1-202ENST00000399127 DCCP43146 1447 aa14.8□□□□□ -0.04
COL25A1-202ENST00000399127 KIAA0232Q92628 1395 aa14.8□□□□□ -0.04
COL25A1-202ENST00000399127 GNAT3A8MTJ3 354 aa14.8□□□□□ -0.04
COL25A1-202ENST00000399127 SIRT2Q8IXJ6 389 aa14.8□□□□□ -0.04
COL25A1-202ENST00000399127 KCNH5Q8NCM2 988 aa14.8□□□□□ -0.04
COL25A1-202ENST00000399127 KIF24Q5T7B8 1368 aa14.8□□□□□ -0.04
COL25A1-202ENST00000399127 NBPF6Q5VWK0 638 aa14.8□□□□□ -0.04
COL25A1-202ENST00000399127 NECTIN2Q92692 538 aa14.8□□□□□ -0.04
COL25A1-202ENST00000399127 NBPF4Q96M43 638 aa14.8□□□□□ -0.04
COL25A1-202ENST00000399127 GCP02774 474 aa14.79□□□□□ -0.04
COL25A1-202ENST00000399127 IP6K1Q92551 441 aa14.79□□□□□ -0.04
COL25A1-202ENST00000399127 LRRC59Q96AG4 307 aaKnown RBP14.79□□□□□ -0.04
COL25A1-202ENST00000399127 NUCB1Q02818 461 aa14.79□□□□□ -0.04
COL25A1-202ENST00000399127 ANKRD45Q5TZF3 282 aa14.79□□□□□ -0.04
COL25A1-202ENST00000399127 IL17REQ8NFR9 667 aa14.79□□□□□ -0.04
COL25A1-202ENST00000399127 USP54Q70EL1 1684 aa14.78□□□□□ -0.04
COL25A1-202ENST00000399127 HAP1P54257 671 aaPredicted RBP14.78□□□□□ -0.04
COL25A1-202ENST00000399127 G2E3Q7L622 706 aa14.78□□□□□ -0.04
COL25A1-202ENST00000399127 CHD1LQ86WJ1 897 aa14.78□□□□□ -0.04
COL25A1-202ENST00000399127 CHMP4BQ9H444 224 aaKnown RBP14.78□□□□□ -0.04
COL25A1-202ENST00000399127 RGS12O14924 1447 aa14.78□□□□□ -0.04
COL25A1-202ENST00000399127 NFAT5O94916 1531 aa14.78□□□□□ -0.04
COL25A1-202ENST00000399127 ZMYND15Q9H091 742 aa14.77□□□□□ -0.04
COL25A1-202ENST00000399127 NPHP3Q7Z494 1330 aa14.77□□□□□ -0.04
COL25A1-202ENST00000399127 KIF1AQ12756 1690 aa14.77□□□□□ -0.04
COL25A1-202ENST00000399127 SLAIN2Q9P270 581 aa14.77□□□□□ -0.05
COL25A1-202ENST00000399127 F6X3S4 739 aa14.76□□□□□ -0.05
COL25A1-202ENST00000399127 RTL1A6NKG5 1358 aa14.76□□□□□ -0.05
COL25A1-202ENST00000399127 MAP3K5Q99683 1374 aa14.76□□□□□ -0.05
COL25A1-202ENST00000399127 ZC3H6P61129 1189 aaKnown RBP14.76□□□□□ -0.05
COL25A1-202ENST00000399127 SLC4A10Q6U841 1118 aa14.76□□□□□ -0.05
COL25A1-202ENST00000399127 BRINP3Q76B58 766 aa14.76□□□□□ -0.05
COL25A1-202ENST00000399127 INTS3Q68E01 1043 aaKnown RBP14.75□□□□□ -0.05
COL25A1-202ENST00000399127 CABLES1Q8TDN4 633 aa14.75□□□□□ -0.05
COL25A1-202ENST00000399127 XIRP1Q702N8 1843 aaKnown RBP14.75□□□□□ -0.05
COL25A1-202ENST00000399127 GLIPR1L2Q4G1C9 344 aa14.74□□□□□ -0.05
COL25A1-202ENST00000399127 UPF2Q9HAU5 1272 aaKnown RBP14.74□□□□□ -0.05
COL25A1-202ENST00000399127 HTATSF1O43719 755 aaKnown RBP14.74□□□□□ -0.05
COL25A1-202ENST00000399127 MEIS3Q99687 375 aa14.74□□□□□ -0.05
COL25A1-202ENST00000399127 PTPRCP08575 1304 aa14.74□□□□□ -0.05
COL25A1-202ENST00000399127 RGPD2P0DJD1 1756 aa14.74□□□□□ -0.05
COL25A1-202ENST00000399127 MFAP1P55081 439 aaKnown RBP14.73□□□□□ -0.05
COL25A1-202ENST00000399127 GCC1Q96CN9 775 aa14.73□□□□□ -0.05
COL25A1-202ENST00000399127 LGR6Q9HBX8 967 aa14.73□□□□□ -0.05
COL25A1-202ENST00000399127 TAF7Q15545 349 aaPredicted RBP14.72□□□□□ -0.05
COL25A1-202ENST00000399127 ARHGEF25Q86VW2 580 aa14.72□□□□□ -0.05
COL25A1-202ENST00000399127 STK31Q9BXU1 1019 aa14.72□□□□□ -0.05
COL25A1-202ENST00000399127 TRPM3Q9HCF6 1732 aaPredicted RBP14.72□□□□□ -0.05
COL25A1-202ENST00000399127 LRRC37A3O60309 1634 aa14.71□□□□□ -0.05
COL25A1-202ENST00000399127 TBC1D32Q96NH3 1257 aa14.71□□□□□ -0.05
COL25A1-202ENST00000399127 AXIN2Q9Y2T1 843 aa14.71□□□□□ -0.05
COL25A1-202ENST00000399127 APBB1O00213 710 aa14.71□□□□□ -0.05
COL25A1-202ENST00000399127 VSIG10Q8N0Z9 540 aa14.7□□□□□ -0.06
COL25A1-202ENST00000399127 FKBP5Q13451 457 aaPredicted RBP14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms