RNA–Protein interactions for RNA: ENST00000398978.7

COL13A1-205, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS P4 TSL 5 BASIC

Gene COL13A1, Length 3,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-205ENST00000398978 MRE11P49959 708 aa24.19■■□□□ 1.46
COL13A1-205ENST00000398978 PKP1Q13835 747 aa24.19■■□□□ 1.46
COL13A1-205ENST00000398978 ANKRD44Q8N8A2 993 aa24.19■■□□□ 1.46
COL13A1-205ENST00000398978 TTC21BQ7Z4L5 1316 aa24.18■■□□□ 1.46
COL13A1-205ENST00000398978 SDSP20132 328 aa24.18■■□□□ 1.46
COL13A1-205ENST00000398978 INTS3Q68E01 1043 aaKnown RBP24.18■■□□□ 1.46
COL13A1-205ENST00000398978 ROBO2Q9HCK4 1378 aa24.18■■□□□ 1.46
COL13A1-205ENST00000398978 CHL1O00533 1208 aa24.17■■□□□ 1.46
COL13A1-205ENST00000398978 CHAMP1Q96JM3 812 aa24.17■■□□□ 1.46
COL13A1-205ENST00000398978 SLC26A8Q96RN1 970 aa24.16■■□□□ 1.46
COL13A1-205ENST00000398978 NRXN3Q9Y4C0 1643 aa24.16■■□□□ 1.46
COL13A1-205ENST00000398978 CIZ1Q9ULV3 898 aaPredicted RBP24.16■■□□□ 1.46
COL13A1-205ENST00000398978 RGS12O14924 1447 aa24.16■■□□□ 1.46
COL13A1-205ENST00000398978 ATP10DQ9P241 1426 aa24.15■■□□□ 1.46
COL13A1-205ENST00000398978 USP26Q9BXU7 913 aa24.15■■□□□ 1.46
COL13A1-205ENST00000398978 FOXD4L5Q5VV16 416 aaPredicted RBP24.14■■□□□ 1.45
COL13A1-205ENST00000398978 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.14■■□□□ 1.45
COL13A1-205ENST00000398978 FOXD4L4Q8WXT5 416 aaPredicted RBP24.14■■□□□ 1.45
COL13A1-205ENST00000398978 RTL1A6NKG5 1358 aa24.13■■□□□ 1.45
COL13A1-205ENST00000398978 NCLP19338 710 aaKnown RBP24.13■■□□□ 1.45
COL13A1-205ENST00000398978 ZGPATQ8N5A5 531 aaKnown RBP24.12■■□□□ 1.45
COL13A1-205ENST00000398978 EXOC6BQ9Y2D4 811 aa24.12■■□□□ 1.45
COL13A1-205ENST00000398978 MTHFSDQ2M296 383 aaKnown RBP24.12■■□□□ 1.45
COL13A1-205ENST00000398978 NUTM2GQ5VZR2 741 aa24.12■■□□□ 1.45
COL13A1-205ENST00000398978 TSPYL4Q9UJ04 414 aa24.12■■□□□ 1.45
COL13A1-205ENST00000398978 SPATA31D1Q6ZQQ2 1576 aa24.12■■□□□ 1.45
COL13A1-205ENST00000398978 MCTP1Q6DN14 999 aa24.12■■□□□ 1.45
COL13A1-205ENST00000398978 MAP3K19Q56UN5 1328 aa24.11■■□□□ 1.45
COL13A1-205ENST00000398978 BAG4O95429 457 aaKnown RBP24.11■■□□□ 1.45
COL13A1-205ENST00000398978 ERBB4Q15303 1308 aa24.11■■□□□ 1.45
COL13A1-205ENST00000398978 DDX49Q9Y6V7 483 aaKnown RBP24.11■■□□□ 1.45
COL13A1-205ENST00000398978 RPAP2Q8IXW5 612 aaPredicted RBP24.1■■□□□ 1.45
COL13A1-205ENST00000398978 NAP1L5Q96NT1 182 aaPredicted RBP24.09■■□□□ 1.45
COL13A1-205ENST00000398978 LTKP29376 864 aa24.09■■□□□ 1.45
COL13A1-205ENST00000398978 RABEP1Q15276 862 aa24.08■■□□□ 1.45
COL13A1-205ENST00000398978 NOL8Q76FK4 1167 aaKnown RBP24.08■■□□□ 1.45
COL13A1-205ENST00000398978 CEBPAP49715 358 aaPredicted RBP24.08■■□□□ 1.45
COL13A1-205ENST00000398978 MON2Q7Z3U7 1717 aa24.07■■□□□ 1.44
COL13A1-205ENST00000398978 RTF1Q92541 710 aaKnown RBP24.07■■□□□ 1.44
COL13A1-205ENST00000398978 C3P01024 1663 aa24.06■■□□□ 1.44
COL13A1-205ENST00000398978 PPP6R1Q9UPN7 881 aa24.06■■□□□ 1.44
COL13A1-205ENST00000398978 RIMS1Q86UR5 1692 aaKnown RBP24.06■■□□□ 1.44
COL13A1-205ENST00000398978 LTV1Q96GA3 475 aaPredicted RBP24.05■■□□□ 1.44
COL13A1-205ENST00000398978 ITSN1Q15811 1721 aa24.04■■□□□ 1.44
COL13A1-205ENST00000398978 GOLGA6L22H0YM25 854 aa24.03■■□□□ 1.44
COL13A1-205ENST00000398978 CRB1P82279 1406 aa24.03■■□□□ 1.44
COL13A1-205ENST00000398978 CAVIN1Q6NZI2 390 aaKnown RBP24.03■■□□□ 1.44
COL13A1-205ENST00000398978 AMPHP49418 695 aa24.02■■□□□ 1.44
COL13A1-205ENST00000398978 SKOR2Q2VWA4 1001 aaPredicted RBP24.02■■□□□ 1.44
COL13A1-205ENST00000398978 PTPRCP08575 1304 aa24.02■■□□□ 1.44
COL13A1-205ENST00000398978 PEAK1Q9H792 1746 aa24.02■■□□□ 1.44
COL13A1-205ENST00000398978 DIP2BQ9P265 1576 aa24.02■■□□□ 1.44
COL13A1-205ENST00000398978 CASC1Q6TDU7 716 aa24.02■■□□□ 1.44
COL13A1-205ENST00000398978 TRIM44Q96DX7 344 aaPredicted RBP24.02■■□□□ 1.44
COL13A1-205ENST00000398978 EYA1Q99502 592 aa24.02■■□□□ 1.44
COL13A1-205ENST00000398978 KIF24Q5T7B8 1368 aa24.01■■□□□ 1.43
COL13A1-205ENST00000398978 HDGFP51858 240 aaKnown RBP24.01■■□□□ 1.43
COL13A1-205ENST00000398978 PDE1AP54750 535 aa24.01■■□□□ 1.43
COL13A1-205ENST00000398978 NGDNQ8NEJ9 315 aaKnown RBP24.01■■□□□ 1.43
COL13A1-205ENST00000398978 AKAP12Q02952 1782 aa24.01■■□□□ 1.43
COL13A1-205ENST00000398978 FKBP5Q13451 457 aaPredicted RBP24.01■■□□□ 1.43
COL13A1-205ENST00000398978 PNMA6EA0A0J9YXQ4 647 aa24■■□□□ 1.43
COL13A1-205ENST00000398978 ESPNB1AK53 854 aa24■■□□□ 1.43
COL13A1-205ENST00000398978 RBM27Q9P2N5 1060 aaKnown RBP24■■□□□ 1.43
COL13A1-205ENST00000398978 OVOS2A0A0J9YW53 1432 aa24■■□□□ 1.43
COL13A1-205ENST00000398978 OVOS2Q6IE36 1432 aa24■■□□□ 1.43
COL13A1-205ENST00000398978 TNRQ92752 1358 aa24■■□□□ 1.43
COL13A1-205ENST00000398978 CLCN1P35523 988 aa24■■□□□ 1.43
COL13A1-205ENST00000398978 AGLP35573 1532 aa24■■□□□ 1.43
COL13A1-205ENST00000398978 RILPL2Q969X0 211 aa23.99■■□□□ 1.43
COL13A1-205ENST00000398978 USP6P35125 1406 aa23.99■■□□□ 1.43
COL13A1-205ENST00000398978 KIAA0232Q92628 1395 aa23.99■■□□□ 1.43
COL13A1-205ENST00000398978 TMEM2Q9UHN6 1383 aa23.99■■□□□ 1.43
COL13A1-205ENST00000398978 PLEKHG5O94827 1062 aa23.99■■□□□ 1.43
COL13A1-205ENST00000398978 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.99■■□□□ 1.43
COL13A1-205ENST00000398978 PRPF40AO75400 957 aaKnown RBP23.99■■□□□ 1.43
COL13A1-205ENST00000398978 FOXD4L6Q3SYB3 417 aaPredicted RBP23.99■■□□□ 1.43
COL13A1-205ENST00000398978 FOXD4L3Q6VB84 417 aaPredicted RBP23.99■■□□□ 1.43
COL13A1-205ENST00000398978 TRIM6-TRIM34B2RNG4 842 aa23.98■■□□□ 1.43
COL13A1-205ENST00000398978 ERC2O15083 957 aa23.98■■□□□ 1.43
COL13A1-205ENST00000398978 HAP1P54257 671 aaPredicted RBP23.98■■□□□ 1.43
COL13A1-205ENST00000398978 ST18O60284 1047 aa23.97■■□□□ 1.43
COL13A1-205ENST00000398978 HMMRO75330 724 aa23.97■■□□□ 1.43
COL13A1-205ENST00000398978 NEK4P51957 841 aa23.97■■□□□ 1.43
COL13A1-205ENST00000398978 PLEKHG3A1L390 1219 aa23.97■■□□□ 1.43
COL13A1-205ENST00000398978 ZDHHC9Q9Y397 364 aa23.97■■□□□ 1.43
COL13A1-205ENST00000398978 NASPP49321 788 aaPredicted RBP23.97■■□□□ 1.43
COL13A1-205ENST00000398978 ADAMTS13Q76LX8 1427 aa23.97■■□□□ 1.43
COL13A1-205ENST00000398978 USHBP1Q8N6Y0 703 aa23.97■■□□□ 1.43
COL13A1-205ENST00000398978 TECPR2O15040 1411 aa23.96■■□□□ 1.43
COL13A1-205ENST00000398978 KLHL40Q2TBA0 621 aa23.96■■□□□ 1.43
COL13A1-205ENST00000398978 STK31Q9BXU1 1019 aa23.96■■□□□ 1.43
COL13A1-205ENST00000398978 PALD1Q9ULE6 856 aa23.96■■□□□ 1.43
COL13A1-205ENST00000398978 GNAI2P04899 355 aa23.96■■□□□ 1.43
COL13A1-205ENST00000398978 SIRT1Q96EB6 747 aa23.96■■□□□ 1.43
COL13A1-205ENST00000398978 LMBRD1Q9NUN5 540 aa23.96■■□□□ 1.43
COL13A1-205ENST00000398978 REC8O95072 547 aa23.95■■□□□ 1.43
COL13A1-205ENST00000398978 AMOTL2Q9Y2J4 779 aa23.95■■□□□ 1.43
COL13A1-205ENST00000398978 MAP4K4O95819 1239 aaPredicted RBP23.95■■□□□ 1.42
COL13A1-205ENST00000398978 FLIIQ13045 1269 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms