RNA–Protein interactions for RNA: ENST00000398743.6

PRAME-202, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-202ENST00000398743 ANKRD45Q5TZF3 282 aa17.38■□□□□ 0.37
PRAME-202ENST00000398743 GAS2L2Q8NHY3 880 aa17.38■□□□□ 0.37
PRAME-202ENST00000398743 MFAP1P55081 439 aaKnown RBP17.38■□□□□ 0.37
PRAME-202ENST00000398743 INTS3Q68E01 1043 aaKnown RBP17.38■□□□□ 0.37
PRAME-202ENST00000398743 SIRT2Q8IXJ6 389 aa17.38■□□□□ 0.37
PRAME-202ENST00000398743 FOXO3O43524 673 aa17.37■□□□□ 0.37
PRAME-202ENST00000398743 C22orf23Q9BZE7 217 aa17.37■□□□□ 0.37
PRAME-202ENST00000398743 PTPRCP08575 1304 aa17.37■□□□□ 0.37
PRAME-202ENST00000398743 RGS12O14924 1447 aa17.36■□□□□ 0.37
PRAME-202ENST00000398743 USP54Q70EL1 1684 aa17.36■□□□□ 0.37
PRAME-202ENST00000398743 ANKLE2Q86XL3 938 aa17.36■□□□□ 0.37
PRAME-202ENST00000398743 ABTB2Q8N961 1025 aa17.36■□□□□ 0.37
PRAME-202ENST00000398743 HOXC9P31274 260 aa17.35■□□□□ 0.37
PRAME-202ENST00000398743 BMP2KLQ5H9B9 411 aa17.35■□□□□ 0.37
PRAME-202ENST00000398743 TSPYL4Q9UJ04 414 aa17.35■□□□□ 0.37
PRAME-202ENST00000398743 NUTM2GQ5VZR2 741 aa17.35■□□□□ 0.37
PRAME-202ENST00000398743 HTATSF1O43719 755 aaKnown RBP17.33■□□□□ 0.37
PRAME-202ENST00000398743 TBC1D2Q9BYX2 928 aa17.33■□□□□ 0.37
PRAME-202ENST00000398743 MIS18AQ9NYP9 233 aa17.33■□□□□ 0.37
PRAME-202ENST00000398743 MARF1Q9Y4F3 1742 aaKnown RBP17.33■□□□□ 0.37
PRAME-202ENST00000398743 PHF8Q9UPP1 1060 aa17.33■□□□□ 0.36
PRAME-202ENST00000398743 ZNF142P52746 1687 aaPredicted RBP17.32■□□□□ 0.36
PRAME-202ENST00000398743 SLC4A2P04920 1241 aa17.32■□□□□ 0.36
PRAME-202ENST00000398743 BCL11AQ9H165 835 aa17.32■□□□□ 0.36
PRAME-202ENST00000398743 RTL1A6NKG5 1358 aa17.31■□□□□ 0.36
PRAME-202ENST00000398743 MSH6P52701 1360 aa17.31■□□□□ 0.36
PRAME-202ENST00000398743 CHD2O14647 1828 aaKnown RBP17.31■□□□□ 0.36
PRAME-202ENST00000398743 C14orf37Q86TY3 774 aa17.3■□□□□ 0.36
PRAME-202ENST00000398743 SLKQ9H2G2 1235 aaPredicted RBP17.3■□□□□ 0.36
PRAME-202ENST00000398743 NWD1Q149M9 1564 aa17.3■□□□□ 0.36
PRAME-202ENST00000398743 GNAT3A8MTJ3 354 aa17.3■□□□□ 0.36
PRAME-202ENST00000398743 FRAT2O75474 233 aaPredicted RBP17.3■□□□□ 0.36
PRAME-202ENST00000398743 RPAP2Q8IXW5 612 aaPredicted RBP17.3■□□□□ 0.36
PRAME-202ENST00000398743 DNAJC5Q9H3Z4 198 aa17.3■□□□□ 0.36
PRAME-202ENST00000398743 DCTPP1Q9H773 170 aa17.3■□□□□ 0.36
PRAME-202ENST00000398743 ATP10DQ9P241 1426 aa17.3■□□□□ 0.36
PRAME-202ENST00000398743 LRRC37A3O60309 1634 aa17.29■□□□□ 0.36
PRAME-202ENST00000398743 ANKRD44Q8N8A2 993 aa17.29■□□□□ 0.36
PRAME-202ENST00000398743 ADGRL3Q9HAR2 1447 aa17.28■□□□□ 0.36
PRAME-202ENST00000398743 RBM25P49756 843 aaKnown RBP17.28■□□□□ 0.36
PRAME-202ENST00000398743 CEP85Q6P2H3 762 aa17.28■□□□□ 0.36
PRAME-202ENST00000398743 LTV1Q96GA3 475 aaPredicted RBP17.28■□□□□ 0.36
PRAME-202ENST00000398743 ANTXR1Q9H6X2 564 aa17.28■□□□□ 0.36
PRAME-202ENST00000398743 MAP3K5Q99683 1374 aa17.27■□□□□ 0.36
PRAME-202ENST00000398743 STK31Q9BXU1 1019 aa17.26■□□□□ 0.35
PRAME-202ENST00000398743 RBM33Q96EV2 1170 aaKnown RBP17.26■□□□□ 0.35
PRAME-202ENST00000398743 MEIS3Q99687 375 aa17.26■□□□□ 0.35
PRAME-202ENST00000398743 CCT4P50991 539 aaKnown RBP17.25■□□□□ 0.35
PRAME-202ENST00000398743 GSE1Q14687 1217 aa17.25■□□□□ 0.35
PRAME-202ENST00000398743 ESCO1Q5FWF5 840 aa17.25■□□□□ 0.35
PRAME-202ENST00000398743 G2E3Q7L622 706 aa17.25■□□□□ 0.35
PRAME-202ENST00000398743 BABAM1Q9NWV8 329 aa17.25■□□□□ 0.35
PRAME-202ENST00000398743 PSME1Q06323 249 aa17.24■□□□□ 0.35
PRAME-202ENST00000398743 IP6K1Q92551 441 aa17.24■□□□□ 0.35
PRAME-202ENST00000398743 SOS1Q07889 1333 aaPredicted RBP17.24■□□□□ 0.35
PRAME-202ENST00000398743 NFAT5O94916 1531 aa17.24■□□□□ 0.35
PRAME-202ENST00000398743 CCDC30Q5VVM6 783 aa17.23■□□□□ 0.35
PRAME-202ENST00000398743 SLC4A10Q6U841 1118 aa17.23■□□□□ 0.35
PRAME-202ENST00000398743 TBC1D9Q6ZT07 1266 aa17.23■□□□□ 0.35
PRAME-202ENST00000398743 PLEKHM2Q8IWE5 1019 aa17.23■□□□□ 0.35
PRAME-202ENST00000398743 HSCBQ8IWL3 235 aa17.23■□□□□ 0.35
PRAME-202ENST00000398743 KCNH5Q8NCM2 988 aa17.23■□□□□ 0.35
PRAME-202ENST00000398743 IL17REQ8NFR9 667 aa17.23■□□□□ 0.35
PRAME-202ENST00000398743 LTN1O94822 1766 aa17.23■□□□□ 0.35
PRAME-202ENST00000398743 ADAMTSL3P82987 1691 aa17.22■□□□□ 0.35
PRAME-202ENST00000398743 CDC45O75419 566 aa17.22■□□□□ 0.35
PRAME-202ENST00000398743 TAF7Q15545 349 aaPredicted RBP17.22■□□□□ 0.35
PRAME-202ENST00000398743 USHBP1Q8N6Y0 703 aa17.22■□□□□ 0.35
PRAME-202ENST00000398743 F6X3S4 739 aa17.22■□□□□ 0.35
PRAME-202ENST00000398743 GSPT1P15170 499 aaKnown RBP17.22■□□□□ 0.35
PRAME-202ENST00000398743 NPHP4O75161 1426 aaPredicted RBP17.21■□□□□ 0.35
PRAME-202ENST00000398743 HMMRO75330 724 aa17.21■□□□□ 0.35
PRAME-202ENST00000398743 EIF5BO60841 1220 aaKnown RBP17.21■□□□□ 0.34
PRAME-202ENST00000398743 FLIIQ13045 1269 aa17.21■□□□□ 0.34
PRAME-202ENST00000398743 FAM208AQ9UK61 1670 aaKnown RBP17.2■□□□□ 0.34
PRAME-202ENST00000398743 TTC22Q5TAA0 569 aa17.2■□□□□ 0.34
PRAME-202ENST00000398743 FKBP5Q13451 457 aaPredicted RBP17.19■□□□□ 0.34
PRAME-202ENST00000398743 SPRYD3Q8NCJ5 442 aa17.19■□□□□ 0.34
PRAME-202ENST00000398743 SNX21Q969T3 373 aa17.19■□□□□ 0.34
PRAME-202ENST00000398743 NBPF6Q5VWK0 638 aa17.18■□□□□ 0.34
PRAME-202ENST00000398743 C16orf71Q8IYS4 520 aaPredicted RBP17.18■□□□□ 0.34
PRAME-202ENST00000398743 NBPF4Q96M43 638 aa17.18■□□□□ 0.34
PRAME-202ENST00000398743 CEMIPQ8WUJ3 1361 aa17.18■□□□□ 0.34
PRAME-202ENST00000398743 GNAI2P04899 355 aa17.18■□□□□ 0.34
PRAME-202ENST00000398743 PHRF1Q9P1Y6 1649 aaKnown RBP17.17■□□□□ 0.34
PRAME-202ENST00000398743 NECTIN2Q92692 538 aa17.17■□□□□ 0.34
PRAME-202ENST00000398743 ZBTB7CA1YPR0 619 aa17.16■□□□□ 0.34
PRAME-202ENST00000398743 CHMP5Q9NZZ3 219 aa17.16■□□□□ 0.34
PRAME-202ENST00000398743 APBB1O00213 710 aa17.16■□□□□ 0.34
PRAME-202ENST00000398743 GNAI3P08754 354 aa17.16■□□□□ 0.34
PRAME-202ENST00000398743 SMARCA5O60264 1052 aaPredicted RBP17.15■□□□□ 0.34
PRAME-202ENST00000398743 OTUD7AQ8TE49 926 aaPredicted RBP17.15■□□□□ 0.34
PRAME-202ENST00000398743 KIF2CQ99661 725 aa17.15■□□□□ 0.34
PRAME-202ENST00000398743 NCOA3Q9Y6Q9 1424 aa17.15■□□□□ 0.34
PRAME-202ENST00000398743 SETD1BQ9UPS6 1966 aaKnown RBP17.15■□□□□ 0.34
PRAME-202ENST00000398743 PXDNLA1KZ92 1463 aa17.15■□□□□ 0.34
PRAME-202ENST00000398743 HDGFL1Q5TGJ6 251 aa17.15■□□□□ 0.34
PRAME-202ENST00000398743 ORAI2Q96SN7 254 aa17.15■□□□□ 0.34
PRAME-202ENST00000398743 MED1Q15648 1581 aaPredicted RBP17.15■□□□□ 0.34
PRAME-202ENST00000398743 GCP02774 474 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms