RNA–Protein interactions for RNA: ENST00000398545.4

CFAP53-201, Transcript of cilia and flagella associated protein 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFAP53, Length 1,851 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP53-201ENST00000398545 UBR1Q8IWV7 1749 aa18.85■□□□□ 0.61
CFAP53-201ENST00000398545 HDGFP51858 240 aaKnown RBP18.84■□□□□ 0.61
CFAP53-201ENST00000398545 CASC1Q6TDU7 716 aa18.84■□□□□ 0.61
CFAP53-201ENST00000398545 ARXQ96QS3 562 aa18.84■□□□□ 0.61
CFAP53-201ENST00000398545 CHL1O00533 1208 aa18.83■□□□□ 0.6
CFAP53-201ENST00000398545 NUCB2P80303 420 aa18.83■□□□□ 0.6
CFAP53-201ENST00000398545 GAS2L2Q8NHY3 880 aa18.83■□□□□ 0.6
CFAP53-201ENST00000398545 FAM83GA6ND36 823 aa18.82■□□□□ 0.6
CFAP53-201ENST00000398545 RRS1Q15050 365 aaKnown RBP18.82■□□□□ 0.6
CFAP53-201ENST00000398545 KLHL40Q2TBA0 621 aa18.82■□□□□ 0.6
CFAP53-201ENST00000398545 RTL1A6NKG5 1358 aa18.82■□□□□ 0.6
CFAP53-201ENST00000398545 USP26Q9BXU7 913 aa18.82■□□□□ 0.6
CFAP53-201ENST00000398545 ZRANB1Q9UGI0 708 aa18.82■□□□□ 0.6
CFAP53-201ENST00000398545 MSH6P52701 1360 aa18.82■□□□□ 0.6
CFAP53-201ENST00000398545 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.81■□□□□ 0.6
CFAP53-201ENST00000398545 RIMS1Q86UR5 1692 aaKnown RBP18.81■□□□□ 0.6
CFAP53-201ENST00000398545 FAM208AQ9UK61 1670 aaKnown RBP18.81■□□□□ 0.6
CFAP53-201ENST00000398545 CEP85Q6P2H3 762 aa18.81■□□□□ 0.6
CFAP53-201ENST00000398545 LRRC37A3O60309 1634 aa18.81■□□□□ 0.6
CFAP53-201ENST00000398545 TTC21BQ7Z4L5 1316 aa18.81■□□□□ 0.6
CFAP53-201ENST00000398545 RBM42Q9BTD8 480 aaKnown RBP18.8■□□□□ 0.6
CFAP53-201ENST00000398545 CWC22Q9HCG8 908 aaKnown RBP18.8■□□□□ 0.6
CFAP53-201ENST00000398545 SSFA2P28290 1259 aa18.8■□□□□ 0.6
CFAP53-201ENST00000398545 EIF4A2Q14240 407 aaKnown RBP18.8■□□□□ 0.6
CFAP53-201ENST00000398545 ARHGEF10O15013 1369 aa18.79■□□□□ 0.6
CFAP53-201ENST00000398545 USP31Q70CQ4 1352 aa18.79■□□□□ 0.6
CFAP53-201ENST00000398545 BAG4O95429 457 aaKnown RBP18.79■□□□□ 0.6
CFAP53-201ENST00000398545 CRB1P82279 1406 aa18.78■□□□□ 0.6
CFAP53-201ENST00000398545 ESPNB1AK53 854 aa18.78■□□□□ 0.6
CFAP53-201ENST00000398545 HMMRO75330 724 aa18.78■□□□□ 0.6
CFAP53-201ENST00000398545 REC8O95072 547 aa18.78■□□□□ 0.6
CFAP53-201ENST00000398545 CYP2E1P05181 493 aaPredicted RBP18.78■□□□□ 0.6
CFAP53-201ENST00000398545 TRIM44Q96DX7 344 aaPredicted RBP18.78■□□□□ 0.6
CFAP53-201ENST00000398545 USP6P35125 1406 aa18.78■□□□□ 0.6
CFAP53-201ENST00000398545 ST18O60284 1047 aa18.77■□□□□ 0.6
CFAP53-201ENST00000398545 DCTN1Q14203 1278 aa18.77■□□□□ 0.6
CFAP53-201ENST00000398545 TXNDC2Q86VQ3 553 aa18.77■□□□□ 0.6
CFAP53-201ENST00000398545 GAS2L3Q86XJ1 694 aa18.77■□□□□ 0.6
CFAP53-201ENST00000398545 OSBPL3Q9H4L5 887 aa18.77■□□□□ 0.6
CFAP53-201ENST00000398545 PRR36Q9H6K5 1346 aa18.77■□□□□ 0.6
CFAP53-201ENST00000398545 PRKCSHP14314 528 aaPredicted RBP18.77■□□□□ 0.6
CFAP53-201ENST00000398545 CCDC173Q0VFZ6 552 aa18.77■□□□□ 0.6
CFAP53-201ENST00000398545 SULT6B1Q6IMI4 303 aa18.77■□□□□ 0.6
CFAP53-201ENST00000398545 XRN1Q8IZH2 1706 aaKnown RBP18.77■□□□□ 0.59
CFAP53-201ENST00000398545 SDSP20132 328 aa18.76■□□□□ 0.59
CFAP53-201ENST00000398545 PPP1R9BQ96SB3 815 aa18.75■□□□□ 0.59
CFAP53-201ENST00000398545 FOXD4L1Q9NU39 408 aa18.75■□□□□ 0.59
CFAP53-201ENST00000398545 DDX49Q9Y6V7 483 aaKnown RBP18.75■□□□□ 0.59
CFAP53-201ENST00000398545 PLEKHG3A1L390 1219 aa18.74■□□□□ 0.59
CFAP53-201ENST00000398545 ZNF445P59923 1031 aa18.74■□□□□ 0.59
CFAP53-201ENST00000398545 AEBP1Q8IUX7 1158 aa18.74■□□□□ 0.59
CFAP53-201ENST00000398545 CCT4P50991 539 aaKnown RBP18.73■□□□□ 0.59
CFAP53-201ENST00000398545 USP54Q70EL1 1684 aa18.73■□□□□ 0.59
CFAP53-201ENST00000398545 FAM69CQ0P6D2 419 aa18.73■□□□□ 0.59
CFAP53-201ENST00000398545 SSH2Q76I76 1423 aa18.73■□□□□ 0.59
CFAP53-201ENST00000398545 ANP32BQ92688 251 aaKnown RBP18.73■□□□□ 0.59
CFAP53-201ENST00000398545 ADAMTS13Q76LX8 1427 aa18.72■□□□□ 0.59
CFAP53-201ENST00000398545 KDRP35968 1356 aa18.72■□□□□ 0.59
CFAP53-201ENST00000398545 TMEM2Q9UHN6 1383 aa18.72■□□□□ 0.59
CFAP53-201ENST00000398545 ERC2O15083 957 aa18.72■□□□□ 0.59
CFAP53-201ENST00000398545 C16orf71Q8IYS4 520 aaPredicted RBP18.72■□□□□ 0.59
CFAP53-201ENST00000398545 MEIS3Q99687 375 aa18.72■□□□□ 0.59
CFAP53-201ENST00000398545 ROBO2Q9HCK4 1378 aa18.71■□□□□ 0.59
CFAP53-201ENST00000398545 NCKAP5LQ9HCH0 1330 aa18.71■□□□□ 0.59
CFAP53-201ENST00000398545 TNRQ92752 1358 aa18.71■□□□□ 0.59
CFAP53-201ENST00000398545 TTC21AQ8NDW8 1320 aa18.71■□□□□ 0.59
CFAP53-201ENST00000398545 NASPP49321 788 aaPredicted RBP18.71■□□□□ 0.59
CFAP53-201ENST00000398545 PXDNLA1KZ92 1463 aa18.7■□□□□ 0.58
CFAP53-201ENST00000398545 MCM10Q7L590 875 aa18.7■□□□□ 0.58
CFAP53-201ENST00000398545 ACEP12821 1306 aa18.69■□□□□ 0.58
CFAP53-201ENST00000398545 SOS1Q07889 1333 aaPredicted RBP18.69■□□□□ 0.58
CFAP53-201ENST00000398545 MCM2P49736 904 aa18.69■□□□□ 0.58
CFAP53-201ENST00000398545 KRT24Q2M2I5 525 aa18.69■□□□□ 0.58
CFAP53-201ENST00000398545 OTUD7AQ8TE49 926 aaPredicted RBP18.69■□□□□ 0.58
CFAP53-201ENST00000398545 NAP1L5Q96NT1 182 aaPredicted RBP18.69■□□□□ 0.58
CFAP53-201ENST00000398545 SBNO1A3KN83 1393 aa18.69■□□□□ 0.58
CFAP53-201ENST00000398545 FLT4P35916 1363 aa18.69■□□□□ 0.58
CFAP53-201ENST00000398545 PLEKHG1Q9ULL1 1385 aa18.69■□□□□ 0.58
CFAP53-201ENST00000398545 LMBRD1Q9NUN5 540 aa18.69■□□□□ 0.58
CFAP53-201ENST00000398545 ERBB4Q15303 1308 aa18.68■□□□□ 0.58
CFAP53-201ENST00000398545 SLC4A2P04920 1241 aa18.68■□□□□ 0.58
CFAP53-201ENST00000398545 UBE2Q2Q8WVN8 375 aa18.68■□□□□ 0.58
CFAP53-201ENST00000398545 PDE1AP54750 535 aa18.67■□□□□ 0.58
CFAP53-201ENST00000398545 PTPRUQ92729 1446 aa18.67■□□□□ 0.58
CFAP53-201ENST00000398545 HTATSF1O43719 755 aaKnown RBP18.67■□□□□ 0.58
CFAP53-201ENST00000398545 SMARCA5O60264 1052 aaPredicted RBP18.67■□□□□ 0.58
CFAP53-201ENST00000398545 HS1BP3Q53T59 392 aa18.67■□□□□ 0.58
CFAP53-201ENST00000398545 MCTP1Q6DN14 999 aa18.67■□□□□ 0.58
CFAP53-201ENST00000398545 ESF1Q9H501 851 aaKnown RBP18.67■□□□□ 0.58
CFAP53-201ENST00000398545 PIK3C2AO00443 1686 aa18.67■□□□□ 0.58
CFAP53-201ENST00000398545 SALL3Q9BXA9 1300 aa18.66■□□□□ 0.58
CFAP53-201ENST00000398545 KIF13AQ9H1H9 1805 aa18.66■□□□□ 0.58
CFAP53-201ENST00000398545 RTF1Q92541 710 aaKnown RBP18.66■□□□□ 0.58
CFAP53-201ENST00000398545 RGPD8O14715 1765 aaPredicted RBP18.66■□□□□ 0.58
CFAP53-201ENST00000398545 EPB41L2O43491 1005 aaKnown RBP18.65■□□□□ 0.58
CFAP53-201ENST00000398545 GNAI2P04899 355 aa18.65■□□□□ 0.58
CFAP53-201ENST00000398545 IL17RAQ96F46 866 aa18.65■□□□□ 0.58
CFAP53-201ENST00000398545 ANAPC15P60006 121 aa18.65■□□□□ 0.58
CFAP53-201ENST00000398545 HSP90AB2PQ58FF8 381 aa18.65■□□□□ 0.58
CFAP53-201ENST00000398545 TSPYL4Q9UJ04 414 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms