RNA–Protein interactions for RNA: ENST00000398461.5

MEG3-202, Transcript of maternally expressed 3, humanhuman

TSL 1 (best)

Gene MEG3, Length 3,452 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEG3-202ENST00000398461 ZBTB47Q9UFB7 747 aaPredicted RBP16.36■□□□□ 0.21
MEG3-202ENST00000398461 IQSEC2Q5JU85 1478 aa16.35■□□□□ 0.21
MEG3-202ENST00000398461 XIRP1Q702N8 1843 aaKnown RBP16.35■□□□□ 0.21
MEG3-202ENST00000398461 INSRP06213 1382 aa16.35■□□□□ 0.21
MEG3-202ENST00000398461 RARSP54136 660 aaKnown RBP16.35■□□□□ 0.21
MEG3-202ENST00000398461 TOM1L2Q6ZVM7 507 aa16.35■□□□□ 0.21
MEG3-202ENST00000398461 SSH1Q8WYL5 1049 aa16.35■□□□□ 0.21
MEG3-202ENST00000398461 IGSF1Q8N6C5 1336 aa16.34■□□□□ 0.21
MEG3-202ENST00000398461 EVA1CP58658 441 aa16.34■□□□□ 0.21
MEG3-202ENST00000398461 PPP4R2Q9NY27 417 aa16.34■□□□□ 0.21
MEG3-202ENST00000398461 ZNF530Q6P9A1 599 aaPredicted RBP16.33■□□□□ 0.21
MEG3-202ENST00000398461 RLBP1P12271 317 aa16.33■□□□□ 0.2
MEG3-202ENST00000398461 CCDC27Q2M243 656 aa16.32■□□□□ 0.2
MEG3-202ENST00000398461 TSPYL4Q9UJ04 414 aa16.32■□□□□ 0.2
MEG3-202ENST00000398461 ERBB3P21860 1342 aa16.31■□□□□ 0.2
MEG3-202ENST00000398461 IL17REQ8NFR9 667 aa16.31■□□□□ 0.2
MEG3-202ENST00000398461 LTN1O94822 1766 aa16.31■□□□□ 0.2
MEG3-202ENST00000398461 DDX54Q8TDD1 881 aaKnown RBP16.31■□□□□ 0.2
MEG3-202ENST00000398461 RAPGEF4Q8WZA2 1011 aa16.3■□□□□ 0.2
MEG3-202ENST00000398461 TNS3Q68CZ2 1445 aa16.3■□□□□ 0.2
MEG3-202ENST00000398461 GNAT3A8MTJ3 354 aa16.3■□□□□ 0.2
MEG3-202ENST00000398461 TWISTNBQ3B726 338 aaPredicted RBP16.3■□□□□ 0.2
MEG3-202ENST00000398461 LARP1Q6PKG0 1096 aaKnown RBP16.3■□□□□ 0.2
MEG3-202ENST00000398461 BTG4Q9NY30 223 aa16.3■□□□□ 0.2
MEG3-202ENST00000398461 NOB1Q9ULX3 412 aaKnown RBP16.3■□□□□ 0.2
MEG3-202ENST00000398461 SRCAPQ6ZRS2 3230 aa16.3■□□□□ 0.2
MEG3-202ENST00000398461 RGPD2P0DJD1 1756 aa16.29■□□□□ 0.2
MEG3-202ENST00000398461 KCNQ3O43525 872 aa16.29■□□□□ 0.2
MEG3-202ENST00000398461 EIF2S2P20042 333 aaKnown RBP16.29■□□□□ 0.2
MEG3-202ENST00000398461 FTSJ3Q8IY81 847 aaKnown RBP16.29■□□□□ 0.2
MEG3-202ENST00000398461 GNAI1P63096 354 aa16.28■□□□□ 0.2
MEG3-202ENST00000398461 CCDC9Q9Y3X0 531 aaKnown RBP16.28■□□□□ 0.2
MEG3-202ENST00000398461 SOS2Q07890 1332 aaPredicted RBP16.28■□□□□ 0.2
MEG3-202ENST00000398461 CFAP44Q96MT7 982 aa16.28■□□□□ 0.2
MEG3-202ENST00000398461 USP19O94966 1318 aa16.28■□□□□ 0.2
MEG3-202ENST00000398461 RNF123Q5XPI4 1314 aa16.28■□□□□ 0.2
MEG3-202ENST00000398461 MARF1Q9Y4F3 1742 aaKnown RBP16.27■□□□□ 0.2
MEG3-202ENST00000398461 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.27■□□□□ 0.2
MEG3-202ENST00000398461 GAS2L2Q8NHY3 880 aa16.27■□□□□ 0.2
MEG3-202ENST00000398461 RGPD5Q99666 1765 aa16.27■□□□□ 0.2
MEG3-202ENST00000398461 MED1Q15648 1581 aaPredicted RBP16.27■□□□□ 0.2
MEG3-202ENST00000398461 LMOD3Q0VAK6 560 aa16.27■□□□□ 0.19
MEG3-202ENST00000398461 SLC39A6Q13433 755 aa16.27■□□□□ 0.19
MEG3-202ENST00000398461 C1orf141Q5JVX7 400 aa16.27■□□□□ 0.19
MEG3-202ENST00000398461 NGEFQ8N5V2 710 aa16.27■□□□□ 0.19
MEG3-202ENST00000398461 DCCP43146 1447 aa16.27■□□□□ 0.19
MEG3-202ENST00000398461 ANXA1P04083 346 aa16.26■□□□□ 0.19
MEG3-202ENST00000398461 NFAT5O94916 1531 aa16.26■□□□□ 0.19
MEG3-202ENST00000398461 ARHGEF10O15013 1369 aa16.26■□□□□ 0.19
MEG3-202ENST00000398461 DLG5Q8TDM6 1919 aa16.26■□□□□ 0.19
MEG3-202ENST00000398461 PXDNQ92626 1479 aa16.25■□□□□ 0.19
MEG3-202ENST00000398461 ITPRIPQ8IWB1 547 aa16.25■□□□□ 0.19
MEG3-202ENST00000398461 TEFQ10587 303 aa16.25■□□□□ 0.19
MEG3-202ENST00000398461 VAMP4O75379 141 aa16.25■□□□□ 0.19
MEG3-202ENST00000398461 IFT57Q9NWB7 429 aa16.24■□□□□ 0.19
MEG3-202ENST00000398461 PIP4K2AP48426 406 aaPredicted RBP16.24■□□□□ 0.19
MEG3-202ENST00000398461 TOM1O60784 492 aa16.24■□□□□ 0.19
MEG3-202ENST00000398461 TRIM27P14373 513 aa16.24■□□□□ 0.19
MEG3-202ENST00000398461 PRAMEF22A3QJZ6 481 aa16.23■□□□□ 0.19
MEG3-202ENST00000398461 PLEKHO1Q53GL0 409 aaPredicted RBP16.23■□□□□ 0.19
MEG3-202ENST00000398461 KDRP35968 1356 aa16.23■□□□□ 0.19
MEG3-202ENST00000398461 C1orf115Q9H7X2 142 aa16.22■□□□□ 0.19
MEG3-202ENST00000398461 NCOA3Q9Y6Q9 1424 aa16.22■□□□□ 0.19
MEG3-202ENST00000398461 TATP17735 454 aaPredicted RBP16.22■□□□□ 0.19
MEG3-202ENST00000398461 CALD1Q05682 793 aaKnown RBP16.22■□□□□ 0.19
MEG3-202ENST00000398461 SLC4A10Q6U841 1118 aa16.22■□□□□ 0.19
MEG3-202ENST00000398461 NFATC2IPQ8NCF5 419 aa16.21■□□□□ 0.19
MEG3-202ENST00000398461 SLC4A2P04920 1241 aa16.21■□□□□ 0.19
MEG3-202ENST00000398461 TRPM3Q9HCF6 1732 aaPredicted RBP16.21■□□□□ 0.19
MEG3-202ENST00000398461 F6X3S4 739 aa16.21■□□□□ 0.18
MEG3-202ENST00000398461 ZKSCAN2Q63HK3 967 aa16.2■□□□□ 0.18
MEG3-202ENST00000398461 CHL1O00533 1208 aa16.2■□□□□ 0.18
MEG3-202ENST00000398461 ZNF853P0CG23 659 aa16.2■□□□□ 0.18
MEG3-202ENST00000398461 SLC4A3P48751 1232 aa16.2■□□□□ 0.18
MEG3-202ENST00000398461 SYTL4Q96C24 671 aaPredicted RBP16.2■□□□□ 0.18
MEG3-202ENST00000398461 BTBD11A6QL63 1104 aa16.2■□□□□ 0.18
MEG3-202ENST00000398461 TMEM57Q8N5G2 664 aa16.2■□□□□ 0.18
MEG3-202ENST00000398461 C8orf37Q96NL8 207 aa16.2■□□□□ 0.18
MEG3-202ENST00000398461 G2E3Q7L622 706 aa16.19■□□□□ 0.18
MEG3-202ENST00000398461 MAP3K5Q99683 1374 aa16.19■□□□□ 0.18
MEG3-202ENST00000398461 DZIP1LQ8IYY4 767 aaKnown RBP16.18■□□□□ 0.18
MEG3-202ENST00000398461 BRPF3Q9ULD4 1205 aa16.18■□□□□ 0.18
MEG3-202ENST00000398461 KIF1AQ12756 1690 aa16.18■□□□□ 0.18
MEG3-202ENST00000398461 RTL1A6NKG5 1358 aa16.18■□□□□ 0.18
MEG3-202ENST00000398461 TAF7Q15545 349 aaPredicted RBP16.18■□□□□ 0.18
MEG3-202ENST00000398461 CYP27B1O15528 508 aa16.18■□□□□ 0.18
MEG3-202ENST00000398461 RGS3P49796 1198 aa16.18■□□□□ 0.18
MEG3-202ENST00000398461 IL16Q14005 1332 aa16.17■□□□□ 0.18
MEG3-202ENST00000398461 ATF7IPQ6VMQ6 1270 aa16.17■□□□□ 0.18
MEG3-202ENST00000398461 ROBO1Q9Y6N7 1651 aa16.16■□□□□ 0.18
MEG3-202ENST00000398461 PTCD1O75127 700 aaKnown RBP16.16■□□□□ 0.18
MEG3-202ENST00000398461 DAXXQ9UER7 740 aaPredicted RBP16.16■□□□□ 0.18
MEG3-202ENST00000398461 ALS2Q96Q42 1657 aa16.16■□□□□ 0.18
MEG3-202ENST00000398461 CAMTA1Q9Y6Y1 1673 aa16.16■□□□□ 0.18
MEG3-202ENST00000398461 UTRNP46939 3433 aa16.16■□□□□ 0.18
MEG3-202ENST00000398461 AKAP4Q5JQC9 854 aa16.15■□□□□ 0.18
MEG3-202ENST00000398461 RNMTO43148 476 aaKnown RBP16.15■□□□□ 0.18
MEG3-202ENST00000398461 FAM182BQ5T319 152 aa16.15■□□□□ 0.18
MEG3-202ENST00000398461 ZNF330Q9Y3S2 320 aaPredicted RBP16.15■□□□□ 0.18
MEG3-202ENST00000398461 MEGF6O75095 1541 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms