RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 HS1BP3Q53T59 392 aa11.24□□□□□ -0.61
CAPN3-206ENST00000397163 ZGPATQ8N5A5 531 aaKnown RBP11.24□□□□□ -0.61
CAPN3-206ENST00000397163 CABP1Q9NZU7 370 aa11.24□□□□□ -0.61
CAPN3-206ENST00000397163 CYP2E1P05181 493 aaPredicted RBP11.23□□□□□ -0.61
CAPN3-206ENST00000397163 NOL7Q9UMY1 257 aaKnown RBP11.23□□□□□ -0.61
CAPN3-206ENST00000397163 DCTPP1Q9H773 170 aa11.23□□□□□ -0.61
CAPN3-206ENST00000397163 MAPK8IP2Q13387 824 aaPredicted RBP11.22□□□□□ -0.61
CAPN3-206ENST00000397163 FOXD4L5Q5VV16 416 aaPredicted RBP11.22□□□□□ -0.61
CAPN3-206ENST00000397163 C8orf58Q8NAV2 365 aa11.22□□□□□ -0.61
CAPN3-206ENST00000397163 FOXD4L4Q8WXT5 416 aaPredicted RBP11.22□□□□□ -0.61
CAPN3-206ENST00000397163 POLKQ9UBT6 870 aa11.22□□□□□ -0.61
CAPN3-206ENST00000397163 FAM135BQ49AJ0 1406 aa11.22□□□□□ -0.61
CAPN3-206ENST00000397163 VGLL3A8MV65 326 aa11.22□□□□□ -0.61
CAPN3-206ENST00000397163 GTF2E1P29083 439 aaPredicted RBP11.22□□□□□ -0.61
CAPN3-206ENST00000397163 DMTNQ08495 405 aa11.22□□□□□ -0.61
CAPN3-206ENST00000397163 OTUD7AQ8TE49 926 aaPredicted RBP11.22□□□□□ -0.61
CAPN3-206ENST00000397163 CHAMP1Q96JM3 812 aa11.22□□□□□ -0.61
CAPN3-206ENST00000397163 ZSCAN20P17040 1043 aaPredicted RBP11.22□□□□□ -0.61
CAPN3-206ENST00000397163 TERF1P54274 439 aa11.22□□□□□ -0.61
CAPN3-206ENST00000397163 CDK19Q9BWU1 502 aa11.22□□□□□ -0.61
CAPN3-206ENST00000397163 ARHGEF28Q8N1W1 1705 aaKnown RBP11.22□□□□□ -0.61
CAPN3-206ENST00000397163 LRRC7Q96NW7 1537 aa11.22□□□□□ -0.61
CAPN3-206ENST00000397163 SDSP20132 328 aa11.21□□□□□ -0.61
CAPN3-206ENST00000397163 DNTTIP2Q5QJE6 756 aaKnown RBP11.21□□□□□ -0.61
CAPN3-206ENST00000397163 GPT2Q8TD30 523 aa11.21□□□□□ -0.61
CAPN3-206ENST00000397163 ZFYVE9O95405 1425 aa11.21□□□□□ -0.61
CAPN3-206ENST00000397163 IDI1Q13907 227 aa11.21□□□□□ -0.62
CAPN3-206ENST00000397163 MLECQ14165 292 aa11.21□□□□□ -0.62
CAPN3-206ENST00000397163 RNF214Q8ND24 703 aa11.21□□□□□ -0.62
CAPN3-206ENST00000397163 PDLIM2Q96JY6 352 aa11.21□□□□□ -0.62
CAPN3-206ENST00000397163 ESF1Q9H501 851 aaKnown RBP11.21□□□□□ -0.62
CAPN3-206ENST00000397163 SIGLEC1Q9BZZ2 1709 aa11.21□□□□□ -0.62
CAPN3-206ENST00000397163 SYCE3A1L190 88 aa11.2□□□□□ -0.62
CAPN3-206ENST00000397163 SMARCA5O60264 1052 aaPredicted RBP11.2□□□□□ -0.62
CAPN3-206ENST00000397163 ZNF500O60304 480 aaPredicted RBP11.2□□□□□ -0.62
CAPN3-206ENST00000397163 REC8O95072 547 aa11.2□□□□□ -0.62
CAPN3-206ENST00000397163 PPP6R1Q9UPN7 881 aa11.2□□□□□ -0.62
CAPN3-206ENST00000397163 ARHGAP31Q2M1Z3 1444 aa11.2□□□□□ -0.62
CAPN3-206ENST00000397163 CAMSAP1Q5T5Y3 1602 aa11.2□□□□□ -0.62
CAPN3-206ENST00000397163 SPDYE4A6NLX3 237 aa11.2□□□□□ -0.62
CAPN3-206ENST00000397163 ZNF853P0CG23 659 aa11.2□□□□□ -0.62
CAPN3-206ENST00000397163 ZKSCAN5Q9Y2L8 839 aa11.2□□□□□ -0.62
CAPN3-206ENST00000397163 DYNC1I1O14576 645 aa11.19□□□□□ -0.62
CAPN3-206ENST00000397163 ZBTB22O15209 634 aa11.19□□□□□ -0.62
CAPN3-206ENST00000397163 LMOD3Q0VAK6 560 aa11.19□□□□□ -0.62
CAPN3-206ENST00000397163 PPP4R3BQ5MIZ7 849 aa11.19□□□□□ -0.62
CAPN3-206ENST00000397163 LRSAM1Q6UWE0 723 aa11.19□□□□□ -0.62
CAPN3-206ENST00000397163 CCDC94Q9BW85 323 aaPredicted RBP11.19□□□□□ -0.62
CAPN3-206ENST00000397163 TMEM63CQ9P1W3 806 aa11.19□□□□□ -0.62
CAPN3-206ENST00000397163 ZDHHC9Q9Y397 364 aa11.19□□□□□ -0.62
CAPN3-206ENST00000397163 EMILIN1Q9Y6C2 1016 aa11.19□□□□□ -0.62
CAPN3-206ENST00000397163 CD163L1Q9NR16 1453 aa11.19□□□□□ -0.62
CAPN3-206ENST00000397163 FAM83GA6ND36 823 aa11.19□□□□□ -0.62
CAPN3-206ENST00000397163 ANKRD44Q8N8A2 993 aa11.19□□□□□ -0.62
CAPN3-206ENST00000397163 DCTN1Q14203 1278 aa11.18□□□□□ -0.62
CAPN3-206ENST00000397163 CSPP1Q1MSJ5 1256 aa11.18□□□□□ -0.62
CAPN3-206ENST00000397163 CCDC39Q9UFE4 941 aa11.18□□□□□ -0.62
CAPN3-206ENST00000397163 NEXMIFQ5QGS0 1516 aa11.18□□□□□ -0.62
CAPN3-206ENST00000397163 PTMAP06454 111 aaKnown RBP11.18□□□□□ -0.62
CAPN3-206ENST00000397163 RPAP2Q8IXW5 612 aaPredicted RBP11.18□□□□□ -0.62
CAPN3-206ENST00000397163 ERC2O15083 957 aa11.17□□□□□ -0.62
CAPN3-206ENST00000397163 SASS6Q6UVJ0 657 aa11.17□□□□□ -0.62
CAPN3-206ENST00000397163 NSFL1CQ9UNZ2 370 aaKnown RBP11.17□□□□□ -0.62
CAPN3-206ENST00000397163 ABCC3O15438 1527 aa11.17□□□□□ -0.62
CAPN3-206ENST00000397163 NEK4P51957 841 aa11.17□□□□□ -0.62
CAPN3-206ENST00000397163 CEP85Q6P2H3 762 aa11.17□□□□□ -0.62
CAPN3-206ENST00000397163 AEBP2Q6ZN18 517 aaPredicted RBP11.17□□□□□ -0.62
CAPN3-206ENST00000397163 C17orf53Q8N3J3 647 aaPredicted RBP11.17□□□□□ -0.62
CAPN3-206ENST00000397163 NAP1L2Q9ULW6 460 aaPredicted RBP11.17□□□□□ -0.62
CAPN3-206ENST00000397163 YTHDC2Q9H6S0 1430 aaKnown RBP11.17□□□□□ -0.62
CAPN3-206ENST00000397163 MBD3O95983 291 aa11.16□□□□□ -0.62
CAPN3-206ENST00000397163 MCM5P33992 734 aa11.16□□□□□ -0.62
CAPN3-206ENST00000397163 IL13P35225 146 aa11.16□□□□□ -0.62
CAPN3-206ENST00000397163 TPRNQ4KMQ1 711 aa11.16□□□□□ -0.62
CAPN3-206ENST00000397163 ZNF830Q96NB3 372 aaPredicted RBP11.16□□□□□ -0.62
CAPN3-206ENST00000397163 KIF24Q5T7B8 1368 aa11.16□□□□□ -0.62
CAPN3-206ENST00000397163 ATP2B3Q16720 1220 aa11.16□□□□□ -0.62
CAPN3-206ENST00000397163 PLCD3Q8N3E9 789 aa11.16□□□□□ -0.62
CAPN3-206ENST00000397163 NOL8Q76FK4 1167 aaKnown RBP11.15□□□□□ -0.62
CAPN3-206ENST00000397163 TMX3Q96JJ7 454 aa11.15□□□□□ -0.62
CAPN3-206ENST00000397163 SLC52A1Q9NWF4 448 aa11.15□□□□□ -0.62
CAPN3-206ENST00000397163 PTPRMP28827 1452 aa11.15□□□□□ -0.62
CAPN3-206ENST00000397163 KRT24Q2M2I5 525 aa11.15□□□□□ -0.62
CAPN3-206ENST00000397163 ZNF710Q8N1W2 664 aa11.15□□□□□ -0.62
CAPN3-206ENST00000397163 MEIS3Q99687 375 aa11.14□□□□□ -0.63
CAPN3-206ENST00000397163 RIMS2Q9UQ26 1411 aa11.14□□□□□ -0.63
CAPN3-206ENST00000397163 FOXD4L6Q3SYB3 417 aaPredicted RBP11.14□□□□□ -0.63
CAPN3-206ENST00000397163 FOXD4L3Q6VB84 417 aaPredicted RBP11.14□□□□□ -0.63
CAPN3-206ENST00000397163 CDC42BPGQ6DT37 1551 aa11.14□□□□□ -0.63
CAPN3-206ENST00000397163 MTERF4Q7Z6M4 381 aaKnown RBP11.14□□□□□ -0.63
CAPN3-206ENST00000397163 NME9Q86XW9 330 aa11.14□□□□□ -0.63
CAPN3-206ENST00000397163 TSPY26PQ9H489 355 aa11.14□□□□□ -0.63
CAPN3-206ENST00000397163 ATP10DQ9P241 1426 aa11.14□□□□□ -0.63
CAPN3-206ENST00000397163 HMMRO75330 724 aa11.13□□□□□ -0.63
CAPN3-206ENST00000397163 HAP1P54257 671 aaPredicted RBP11.13□□□□□ -0.63
CAPN3-206ENST00000397163 UTP14CQ5TAP6 766 aaKnown RBP11.13□□□□□ -0.63
CAPN3-206ENST00000397163 ZRANB1Q9UGI0 708 aa11.13□□□□□ -0.63
CAPN3-206ENST00000397163 ANKRD26Q9UPS8 1709 aa11.13□□□□□ -0.63
CAPN3-206ENST00000397163 RRS1Q15050 365 aaKnown RBP11.13□□□□□ -0.63
CAPN3-206ENST00000397163 SYAP1Q96A49 352 aaPredicted RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms