RNA–Protein interactions for RNA: ENST00000396551.7

TRIM39-205, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-205ENST00000396551 CHD1LQ86WJ1 897 aa20.87■□□□□ 0.93
TRIM39-205ENST00000396551 AMPHP49418 695 aa20.87■□□□□ 0.93
TRIM39-205ENST00000396551 NFKBIBQ15653 356 aa20.87■□□□□ 0.93
TRIM39-205ENST00000396551 NLRP6P59044 892 aa20.87■□□□□ 0.93
TRIM39-205ENST00000396551 NUTM2GQ5VZR2 741 aa20.85■□□□□ 0.93
TRIM39-205ENST00000396551 KIF24Q5T7B8 1368 aa20.85■□□□□ 0.93
TRIM39-205ENST00000396551 ZNF142P52746 1687 aaPredicted RBP20.85■□□□□ 0.93
TRIM39-205ENST00000396551 NWD1Q149M9 1564 aa20.84■□□□□ 0.93
TRIM39-205ENST00000396551 GCC1Q96CN9 775 aa20.84■□□□□ 0.93
TRIM39-205ENST00000396551 MIS18AQ9NYP9 233 aa20.83■□□□□ 0.93
TRIM39-205ENST00000396551 INTS3Q68E01 1043 aaKnown RBP20.83■□□□□ 0.92
TRIM39-205ENST00000396551 ANKRD45Q5TZF3 282 aa20.82■□□□□ 0.92
TRIM39-205ENST00000396551 LRRC37A3O60309 1634 aa20.82■□□□□ 0.92
TRIM39-205ENST00000396551 HOXC9P31274 260 aa20.82■□□□□ 0.92
TRIM39-205ENST00000396551 BECN1Q14457 450 aa20.82■□□□□ 0.92
TRIM39-205ENST00000396551 MFAP1P55081 439 aaKnown RBP20.82■□□□□ 0.92
TRIM39-205ENST00000396551 HAP1P54257 671 aaPredicted RBP20.8■□□□□ 0.92
TRIM39-205ENST00000396551 ABTB2Q8N961 1025 aa20.8■□□□□ 0.92
TRIM39-205ENST00000396551 RTF1Q92541 710 aaKnown RBP20.79■□□□□ 0.92
TRIM39-205ENST00000396551 RBM33Q96EV2 1170 aaKnown RBP20.79■□□□□ 0.92
TRIM39-205ENST00000396551 C22orf23Q9BZE7 217 aa20.79■□□□□ 0.92
TRIM39-205ENST00000396551 LTN1O94822 1766 aa20.79■□□□□ 0.92
TRIM39-205ENST00000396551 ANKLE2Q86XL3 938 aa20.79■□□□□ 0.92
TRIM39-205ENST00000396551 TBC1D2Q9BYX2 928 aa20.79■□□□□ 0.92
TRIM39-205ENST00000396551 GAS2L2Q8NHY3 880 aa20.78■□□□□ 0.92
TRIM39-205ENST00000396551 TSPYL4Q9UJ04 414 aa20.78■□□□□ 0.92
TRIM39-205ENST00000396551 ATP10DQ9P241 1426 aa20.78■□□□□ 0.92
TRIM39-205ENST00000396551 PHF8Q9UPP1 1060 aa20.77■□□□□ 0.92
TRIM39-205ENST00000396551 PTPRCP08575 1304 aa20.77■□□□□ 0.92
TRIM39-205ENST00000396551 MSH6P52701 1360 aa20.77■□□□□ 0.92
TRIM39-205ENST00000396551 ADAMTSL3P82987 1691 aa20.76■□□□□ 0.91
TRIM39-205ENST00000396551 BMP2KLQ5H9B9 411 aa20.76■□□□□ 0.91
TRIM39-205ENST00000396551 SLC4A2P04920 1241 aa20.75■□□□□ 0.91
TRIM39-205ENST00000396551 FRAT2O75474 233 aaPredicted RBP20.75■□□□□ 0.91
TRIM39-205ENST00000396551 G2E3Q7L622 706 aa20.74■□□□□ 0.91
TRIM39-205ENST00000396551 HTATSF1O43719 755 aaKnown RBP20.74■□□□□ 0.91
TRIM39-205ENST00000396551 LTV1Q96GA3 475 aaPredicted RBP20.74■□□□□ 0.91
TRIM39-205ENST00000396551 ANTXR1Q9H6X2 564 aa20.74■□□□□ 0.91
TRIM39-205ENST00000396551 SLKQ9H2G2 1235 aaPredicted RBP20.73■□□□□ 0.91
TRIM39-205ENST00000396551 DCTPP1Q9H773 170 aa20.73■□□□□ 0.91
TRIM39-205ENST00000396551 NFAT5O94916 1531 aa20.73■□□□□ 0.91
TRIM39-205ENST00000396551 FAM208AQ9UK61 1670 aaKnown RBP20.73■□□□□ 0.91
TRIM39-205ENST00000396551 ANKRD44Q8N8A2 993 aa20.73■□□□□ 0.91
TRIM39-205ENST00000396551 RTL1A6NKG5 1358 aa20.73■□□□□ 0.91
TRIM39-205ENST00000396551 ADGRL3Q9HAR2 1447 aa20.73■□□□□ 0.91
TRIM39-205ENST00000396551 C14orf37Q86TY3 774 aa20.72■□□□□ 0.91
TRIM39-205ENST00000396551 GNAT3A8MTJ3 354 aa20.72■□□□□ 0.91
TRIM39-205ENST00000396551 MEIS3Q99687 375 aa20.72■□□□□ 0.91
TRIM39-205ENST00000396551 CEP85Q6P2H3 762 aa20.71■□□□□ 0.91
TRIM39-205ENST00000396551 SETD1BQ9UPS6 1966 aaKnown RBP20.71■□□□□ 0.91
TRIM39-205ENST00000396551 MAP3K5Q99683 1374 aa20.7■□□□□ 0.9
TRIM39-205ENST00000396551 USHBP1Q8N6Y0 703 aa20.7■□□□□ 0.9
TRIM39-205ENST00000396551 IL17REQ8NFR9 667 aa20.7■□□□□ 0.9
TRIM39-205ENST00000396551 EIF5BO60841 1220 aaKnown RBP20.7■□□□□ 0.9
TRIM39-205ENST00000396551 RPAP2Q8IXW5 612 aaPredicted RBP20.69■□□□□ 0.9
TRIM39-205ENST00000396551 RGPD2P0DJD1 1756 aa20.69■□□□□ 0.9
TRIM39-205ENST00000396551 RBM25P49756 843 aaKnown RBP20.68■□□□□ 0.9
TRIM39-205ENST00000396551 F6X3S4 739 aa20.68■□□□□ 0.9
TRIM39-205ENST00000396551 PLEKHM2Q8IWE5 1019 aa20.68■□□□□ 0.9
TRIM39-205ENST00000396551 ESCO1Q5FWF5 840 aa20.67■□□□□ 0.9
TRIM39-205ENST00000396551 IP6K1Q92551 441 aa20.67■□□□□ 0.9
TRIM39-205ENST00000396551 GSPT1P15170 499 aaKnown RBP20.66■□□□□ 0.9
TRIM39-205ENST00000396551 TBC1D9Q6ZT07 1266 aa20.66■□□□□ 0.9
TRIM39-205ENST00000396551 NPHP4O75161 1426 aaPredicted RBP20.66■□□□□ 0.9
TRIM39-205ENST00000396551 C16orf71Q8IYS4 520 aaPredicted RBP20.66■□□□□ 0.9
TRIM39-205ENST00000396551 PHRF1Q9P1Y6 1649 aaKnown RBP20.66■□□□□ 0.9
TRIM39-205ENST00000396551 CACNA1FO60840 1977 aa20.65■□□□□ 0.9
TRIM39-205ENST00000396551 SLC4A10Q6U841 1118 aa20.65■□□□□ 0.9
TRIM39-205ENST00000396551 PLEKHG5O94827 1062 aa20.64■□□□□ 0.89
TRIM39-205ENST00000396551 PSME1Q06323 249 aa20.64■□□□□ 0.89
TRIM39-205ENST00000396551 NBPF6Q5VWK0 638 aa20.64■□□□□ 0.89
TRIM39-205ENST00000396551 SPRYD3Q8NCJ5 442 aa20.64■□□□□ 0.89
TRIM39-205ENST00000396551 NBPF4Q96M43 638 aa20.64■□□□□ 0.89
TRIM39-205ENST00000396551 CCT4P50991 539 aaKnown RBP20.63■□□□□ 0.89
TRIM39-205ENST00000396551 GSE1Q14687 1217 aa20.63■□□□□ 0.89
TRIM39-205ENST00000396551 TAF7Q15545 349 aaPredicted RBP20.63■□□□□ 0.89
TRIM39-205ENST00000396551 N4BP2Q86UW6 1770 aaPredicted RBP20.63■□□□□ 0.89
TRIM39-205ENST00000396551 OTUD7AQ8TE49 926 aaPredicted RBP20.63■□□□□ 0.89
TRIM39-205ENST00000396551 STK31Q9BXU1 1019 aa20.63■□□□□ 0.89
TRIM39-205ENST00000396551 NECTIN2Q92692 538 aa20.62■□□□□ 0.89
TRIM39-205ENST00000396551 FLIIQ13045 1269 aa20.62■□□□□ 0.89
TRIM39-205ENST00000396551 CCDC30Q5VVM6 783 aa20.62■□□□□ 0.89
TRIM39-205ENST00000396551 MED1Q15648 1581 aaPredicted RBP20.62■□□□□ 0.89
TRIM39-205ENST00000396551 ORAI2Q96SN7 254 aa20.61■□□□□ 0.89
TRIM39-205ENST00000396551 KIF2CQ99661 725 aa20.61■□□□□ 0.89
TRIM39-205ENST00000396551 SMARCA5O60264 1052 aaPredicted RBP20.61■□□□□ 0.89
TRIM39-205ENST00000396551 TTC22Q5TAA0 569 aa20.61■□□□□ 0.89
TRIM39-205ENST00000396551 BABAM1Q9NWV8 329 aa20.61■□□□□ 0.89
TRIM39-205ENST00000396551 CEMIPQ8WUJ3 1361 aa20.6■□□□□ 0.89
TRIM39-205ENST00000396551 CDC45O75419 566 aa20.6■□□□□ 0.89
TRIM39-205ENST00000396551 ZBTB7CA1YPR0 619 aa20.59■□□□□ 0.89
TRIM39-205ENST00000396551 KCNH5Q8NCM2 988 aa20.59■□□□□ 0.89
TRIM39-205ENST00000396551 KDM3BQ7LBC6 1761 aa20.59■□□□□ 0.89
TRIM39-205ENST00000396551 LMO7Q8WWI1 1683 aa20.59■□□□□ 0.89
TRIM39-205ENST00000396551 SLIT3O75094 1523 aa20.59■□□□□ 0.89
TRIM39-205ENST00000396551 SOS1Q07889 1333 aaPredicted RBP20.59■□□□□ 0.89
TRIM39-205ENST00000396551 APBB1O00213 710 aa20.58■□□□□ 0.89
TRIM39-205ENST00000396551 XPCQ01831 940 aaPredicted RBP20.58■□□□□ 0.89
TRIM39-205ENST00000396551 TRPM3Q9HCF6 1732 aaPredicted RBP20.58■□□□□ 0.89
TRIM39-205ENST00000396551 FKBP5Q13451 457 aaPredicted RBP20.58■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms