RNA–Protein interactions for RNA: ENST00000396384.1

TUBB-207, Transcript of tubulin beta class I, humanhuman

TSL 3 BASIC

Gene TUBB, Length 2,823 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB-207ENST00000396384 THUMPD2Q9BTF0 503 aaKnown RBP13.02□□□□□ -0.33
TUBB-207ENST00000396384 CHMP4BQ9H444 224 aaKnown RBP13.02□□□□□ -0.33
TUBB-207ENST00000396384 FSD2A1L4K1 749 aa13.01□□□□□ -0.33
TUBB-207ENST00000396384 VAMP4O75379 141 aa13.01□□□□□ -0.33
TUBB-207ENST00000396384 NFE2L2Q16236 605 aa13.01□□□□□ -0.33
TUBB-207ENST00000396384 CALD1Q05682 793 aaKnown RBP13.01□□□□□ -0.33
TUBB-207ENST00000396384 PSME1Q06323 249 aa13.01□□□□□ -0.33
TUBB-207ENST00000396384 SNX21Q969T3 373 aa13.01□□□□□ -0.33
TUBB-207ENST00000396384 GCC1Q96CN9 775 aa13.01□□□□□ -0.33
TUBB-207ENST00000396384 C1orf115Q9H7X2 142 aa13.01□□□□□ -0.33
TUBB-207ENST00000396384 XIRP1Q702N8 1843 aaKnown RBP13.01□□□□□ -0.33
TUBB-207ENST00000396384 C1orf167Q5SNV9 1468 aa13□□□□□ -0.33
TUBB-207ENST00000396384 OVOS2A0A0J9YW53 1432 aa13□□□□□ -0.33
TUBB-207ENST00000396384 OVOS2Q6IE36 1432 aa13□□□□□ -0.33
TUBB-207ENST00000396384 TTC21AQ8NDW8 1320 aa13□□□□□ -0.33
TUBB-207ENST00000396384 MRPL50Q8N5N7 158 aaKnown RBP13□□□□□ -0.33
TUBB-207ENST00000396384 ARHGAP45Q92619 1136 aa13□□□□□ -0.33
TUBB-207ENST00000396384 ELL2O00472 640 aaPredicted RBP13□□□□□ -0.33
TUBB-207ENST00000396384 TSPYL6Q8N831 410 aa13□□□□□ -0.33
TUBB-207ENST00000396384 DDX11L8A8MPP1 907 aa12.99□□□□□ -0.33
TUBB-207ENST00000396384 NLRP6P59044 892 aa12.99□□□□□ -0.33
TUBB-207ENST00000396384 ABTB2Q8N961 1025 aa12.99□□□□□ -0.33
TUBB-207ENST00000396384 PIK3C2AO00443 1686 aa12.99□□□□□ -0.33
TUBB-207ENST00000396384 MST1RQ04912 1400 aa12.99□□□□□ -0.33
TUBB-207ENST00000396384 EIF5BO60841 1220 aaKnown RBP12.99□□□□□ -0.33
TUBB-207ENST00000396384 HSP90AB1P08238 724 aaKnown RBP12.99□□□□□ -0.33
TUBB-207ENST00000396384 GNAI1P63096 354 aa12.99□□□□□ -0.33
TUBB-207ENST00000396384 DDX17Q92841 729 aaKnown RBP12.99□□□□□ -0.33
TUBB-207ENST00000396384 MSH6P52701 1360 aa12.99□□□□□ -0.33
TUBB-207ENST00000396384 PLEKHG5O94827 1062 aa12.98□□□□□ -0.33
TUBB-207ENST00000396384 DDIT3P35638 169 aa12.98□□□□□ -0.33
TUBB-207ENST00000396384 IFT57Q9NWB7 429 aa12.98□□□□□ -0.33
TUBB-207ENST00000396384 NCOA3Q9Y6Q9 1424 aa12.98□□□□□ -0.33
TUBB-207ENST00000396384 RRAGDQ9NQL2 400 aaPredicted RBP12.98□□□□□ -0.33
TUBB-207ENST00000396384 MBIPQ9NS73 344 aa12.98□□□□□ -0.33
TUBB-207ENST00000396384 CADPS2Q86UW7 1296 aa12.97□□□□□ -0.33
TUBB-207ENST00000396384 PANK2Q9BZ23 570 aa12.97□□□□□ -0.33
TUBB-207ENST00000396384 AATKQ6ZMQ8 1374 aa12.97□□□□□ -0.33
TUBB-207ENST00000396384 CDK12Q9NYV4 1490 aaPredicted RBP12.97□□□□□ -0.33
TUBB-207ENST00000396384 SIRT2Q8IXJ6 389 aa12.97□□□□□ -0.33
TUBB-207ENST00000396384 HSP90AA1P07900 732 aaKnown RBP12.96□□□□□ -0.33
TUBB-207ENST00000396384 TWISTNBQ3B726 338 aaPredicted RBP12.96□□□□□ -0.33
TUBB-207ENST00000396384 TBC1D9Q6ZT07 1266 aa12.96□□□□□ -0.33
TUBB-207ENST00000396384 KIF2CQ99661 725 aa12.96□□□□□ -0.33
TUBB-207ENST00000396384 DLG5Q8TDM6 1919 aa12.96□□□□□ -0.33
TUBB-207ENST00000396384 DCCP43146 1447 aa12.96□□□□□ -0.33
TUBB-207ENST00000396384 IL13P35225 146 aa12.96□□□□□ -0.34
TUBB-207ENST00000396384 TNPO1Q92973 898 aaKnown RBP12.96□□□□□ -0.34
TUBB-207ENST00000396384 ZNF853P0CG23 659 aa12.95□□□□□ -0.34
TUBB-207ENST00000396384 MRE11P49959 708 aa12.95□□□□□ -0.34
TUBB-207ENST00000396384 LMOD2Q6P5Q4 547 aa12.95□□□□□ -0.34
TUBB-207ENST00000396384 CIZ1Q9ULV3 898 aaPredicted RBP12.95□□□□□ -0.34
TUBB-207ENST00000396384 USP31Q70CQ4 1352 aa12.95□□□□□ -0.34
TUBB-207ENST00000396384 ABCC4O15439 1325 aa12.95□□□□□ -0.34
TUBB-207ENST00000396384 KRT28Q7Z3Y7 464 aa12.95□□□□□ -0.34
TUBB-207ENST00000396384 C8orf58Q8NAV2 365 aa12.94□□□□□ -0.34
TUBB-207ENST00000396384 CFAP44Q96MT7 982 aa12.94□□□□□ -0.34
TUBB-207ENST00000396384 PEAK1Q9H792 1746 aa12.94□□□□□ -0.34
TUBB-207ENST00000396384 GBP4Q96PP9 640 aa12.94□□□□□ -0.34
TUBB-207ENST00000396384 MARF1Q9Y4F3 1742 aaKnown RBP12.94□□□□□ -0.34
TUBB-207ENST00000396384 CD2BP2O95400 341 aaKnown RBP12.94□□□□□ -0.34
TUBB-207ENST00000396384 LMOD3Q0VAK6 560 aa12.94□□□□□ -0.34
TUBB-207ENST00000396384 FOXD4L1Q9NU39 408 aa12.94□□□□□ -0.34
TUBB-207ENST00000396384 MAP3K19Q56UN5 1328 aa12.93□□□□□ -0.34
TUBB-207ENST00000396384 RAB3GAP1Q15042 981 aa12.93□□□□□ -0.34
TUBB-207ENST00000396384 API5Q9BZZ5 524 aaKnown RBP12.93□□□□□ -0.34
TUBB-207ENST00000396384 K7ELQ4 463 aaPredicted RBP12.93□□□□□ -0.34
TUBB-207ENST00000396384 HSP90AB2PQ58FF8 381 aa12.93□□□□□ -0.34
TUBB-207ENST00000396384 GRPEL1Q9HAV7 217 aa12.93□□□□□ -0.34
TUBB-207ENST00000396384 FAM83GA6ND36 823 aa12.92□□□□□ -0.34
TUBB-207ENST00000396384 RBM42Q9BTD8 480 aaKnown RBP12.92□□□□□ -0.34
TUBB-207ENST00000396384 KIF1AQ12756 1690 aa12.92□□□□□ -0.34
TUBB-207ENST00000396384 CDC45O75419 566 aa12.92□□□□□ -0.34
TUBB-207ENST00000396384 SLAIN2Q9P270 581 aa12.91□□□□□ -0.34
TUBB-207ENST00000396384 DCTN1Q14203 1278 aa12.91□□□□□ -0.34
TUBB-207ENST00000396384 BRINP3Q76B58 766 aa12.91□□□□□ -0.34
TUBB-207ENST00000396384 ISY1Q9ULR0 285 aaKnown RBP12.91□□□□□ -0.34
TUBB-207ENST00000396384 SKOR2Q2VWA4 1001 aaPredicted RBP12.9□□□□□ -0.34
TUBB-207ENST00000396384 TRPM3Q9HCF6 1732 aaPredicted RBP12.9□□□□□ -0.34
TUBB-207ENST00000396384 ZBTB7CA1YPR0 619 aa12.89□□□□□ -0.35
TUBB-207ENST00000396384 AMPHP49418 695 aa12.89□□□□□ -0.35
TUBB-207ENST00000396384 EIF4A2Q14240 407 aaKnown RBP12.89□□□□□ -0.35
TUBB-207ENST00000396384 GSPT1P15170 499 aaKnown RBP12.89□□□□□ -0.35
TUBB-207ENST00000396384 PLEKHM2Q8IWE5 1019 aa12.89□□□□□ -0.35
TUBB-207ENST00000396384 PTMSP20962 102 aa12.89□□□□□ -0.35
TUBB-207ENST00000396384 DCTPP1Q9H773 170 aa12.89□□□□□ -0.35
TUBB-207ENST00000396384 NPHP3Q7Z494 1330 aa12.88□□□□□ -0.35
TUBB-207ENST00000396384 GAS2L2Q8NHY3 880 aa12.88□□□□□ -0.35
TUBB-207ENST00000396384 USP54Q70EL1 1684 aa12.88□□□□□ -0.35
TUBB-207ENST00000396384 SBNO1A3KN83 1393 aa12.87□□□□□ -0.35
TUBB-207ENST00000396384 KIF24Q5T7B8 1368 aa12.87□□□□□ -0.35
TUBB-207ENST00000396384 LTN1O94822 1766 aa12.87□□□□□ -0.35
TUBB-207ENST00000396384 CLCN1P35523 988 aa12.87□□□□□ -0.35
TUBB-207ENST00000396384 INTS3Q68E01 1043 aaKnown RBP12.87□□□□□ -0.35
TUBB-207ENST00000396384 AEBP1Q8IUX7 1158 aa12.87□□□□□ -0.35
TUBB-207ENST00000396384 C16orf71Q8IYS4 520 aaPredicted RBP12.87□□□□□ -0.35
TUBB-207ENST00000396384 RGPD1P0DJD0 1748 aa12.87□□□□□ -0.35
TUBB-207ENST00000396384 FLT4P35916 1363 aa12.86□□□□□ -0.35
TUBB-207ENST00000396384 SSFA2P28290 1259 aa12.86□□□□□ -0.35
TUBB-207ENST00000396384 TTC22Q5TAA0 569 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms