RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 MSH6P52701 1360 aa19.48■□□□□ 0.71
HOXA3-202ENST00000396352 AK9Q5TCS8 1911 aa19.48■□□□□ 0.71
HOXA3-202ENST00000396352 KIAA0232Q92628 1395 aa19.48■□□□□ 0.71
HOXA3-202ENST00000396352 OVOS2A0A0J9YW53 1432 aa19.48■□□□□ 0.71
HOXA3-202ENST00000396352 OVOS2Q6IE36 1432 aa19.48■□□□□ 0.71
HOXA3-202ENST00000396352 SULT6B1Q6IMI4 303 aa19.48■□□□□ 0.71
HOXA3-202ENST00000396352 GAS2L3Q86XJ1 694 aa19.48■□□□□ 0.71
HOXA3-202ENST00000396352 CEP85Q6P2H3 762 aa19.47■□□□□ 0.71
HOXA3-202ENST00000396352 CLEC17AQ6ZS10 378 aa19.47■□□□□ 0.71
HOXA3-202ENST00000396352 SSFA2P28290 1259 aa19.47■□□□□ 0.71
HOXA3-202ENST00000396352 SKOR2Q2VWA4 1001 aaPredicted RBP19.47■□□□□ 0.71
HOXA3-202ENST00000396352 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.47■□□□□ 0.71
HOXA3-202ENST00000396352 RTL1A6NKG5 1358 aa19.47■□□□□ 0.71
HOXA3-202ENST00000396352 MLECQ14165 292 aa19.47■□□□□ 0.71
HOXA3-202ENST00000396352 OTUD7AQ8TE49 926 aaPredicted RBP19.47■□□□□ 0.71
HOXA3-202ENST00000396352 PTMSP20962 102 aa19.46■□□□□ 0.71
HOXA3-202ENST00000396352 MCM10Q7L590 875 aa19.46■□□□□ 0.71
HOXA3-202ENST00000396352 CYB5RLQ6IPT4 315 aa19.45■□□□□ 0.7
HOXA3-202ENST00000396352 RPAP2Q8IXW5 612 aaPredicted RBP19.45■□□□□ 0.7
HOXA3-202ENST00000396352 ROBO2Q9HCK4 1378 aa19.45■□□□□ 0.7
HOXA3-202ENST00000396352 RABEP1Q15276 862 aa19.45■□□□□ 0.7
HOXA3-202ENST00000396352 USP26Q9BXU7 913 aa19.45■□□□□ 0.7
HOXA3-202ENST00000396352 CRB1P82279 1406 aa19.44■□□□□ 0.7
HOXA3-202ENST00000396352 PTPRCP08575 1304 aa19.44■□□□□ 0.7
HOXA3-202ENST00000396352 CLCN1P35523 988 aa19.44■□□□□ 0.7
HOXA3-202ENST00000396352 TTC21BQ7Z4L5 1316 aa19.44■□□□□ 0.7
HOXA3-202ENST00000396352 EIF5BO60841 1220 aaKnown RBP19.44■□□□□ 0.7
HOXA3-202ENST00000396352 UBR1Q8IWV7 1749 aa19.43■□□□□ 0.7
HOXA3-202ENST00000396352 HAP1P54257 671 aaPredicted RBP19.43■□□□□ 0.7
HOXA3-202ENST00000396352 FMN2Q9NZ56 1722 aa19.43■□□□□ 0.7
HOXA3-202ENST00000396352 MEIS3Q99687 375 aa19.42■□□□□ 0.7
HOXA3-202ENST00000396352 RIMS1Q86UR5 1692 aaKnown RBP19.42■□□□□ 0.7
HOXA3-202ENST00000396352 SDSP20132 328 aa19.42■□□□□ 0.7
HOXA3-202ENST00000396352 SMARCA5O60264 1052 aaPredicted RBP19.41■□□□□ 0.7
HOXA3-202ENST00000396352 USP6P35125 1406 aa19.41■□□□□ 0.7
HOXA3-202ENST00000396352 BAG4O95429 457 aaKnown RBP19.4■□□□□ 0.7
HOXA3-202ENST00000396352 HSP90AB2PQ58FF8 381 aa19.4■□□□□ 0.7
HOXA3-202ENST00000396352 ACEP12821 1306 aa19.4■□□□□ 0.7
HOXA3-202ENST00000396352 ADAMTS13Q76LX8 1427 aa19.4■□□□□ 0.7
HOXA3-202ENST00000396352 USP31Q70CQ4 1352 aa19.4■□□□□ 0.7
HOXA3-202ENST00000396352 TUBGCP6Q96RT7 1819 aa19.4■□□□□ 0.7
HOXA3-202ENST00000396352 CYP2E1P05181 493 aaPredicted RBP19.39■□□□□ 0.69
HOXA3-202ENST00000396352 ERBB4Q15303 1308 aa19.38■□□□□ 0.69
HOXA3-202ENST00000396352 TMEM2Q9UHN6 1383 aa19.38■□□□□ 0.69
HOXA3-202ENST00000396352 IBTKQ9P2D0 1353 aaPredicted RBP19.37■□□□□ 0.69
HOXA3-202ENST00000396352 PLEKHG3A1L390 1219 aa19.37■□□□□ 0.69
HOXA3-202ENST00000396352 SLC4A2P04920 1241 aa19.37■□□□□ 0.69
HOXA3-202ENST00000396352 KLHL40Q2TBA0 621 aa19.37■□□□□ 0.69
HOXA3-202ENST00000396352 APBB1O00213 710 aa19.37■□□□□ 0.69
HOXA3-202ENST00000396352 SSH2Q76I76 1423 aa19.37■□□□□ 0.69
HOXA3-202ENST00000396352 GOLGA6L22H0YM25 854 aa19.36■□□□□ 0.69
HOXA3-202ENST00000396352 ARHGEF10O15013 1369 aa19.36■□□□□ 0.69
HOXA3-202ENST00000396352 HDGFP51858 240 aaKnown RBP19.36■□□□□ 0.69
HOXA3-202ENST00000396352 TNRQ92752 1358 aa19.35■□□□□ 0.69
HOXA3-202ENST00000396352 MAP3K19Q56UN5 1328 aa19.35■□□□□ 0.69
HOXA3-202ENST00000396352 MIS18AQ9NYP9 233 aa19.35■□□□□ 0.69
HOXA3-202ENST00000396352 ESPNB1AK53 854 aa19.35■□□□□ 0.69
HOXA3-202ENST00000396352 PKP1Q13835 747 aa19.35■□□□□ 0.69
HOXA3-202ENST00000396352 CASC1Q6TDU7 716 aa19.35■□□□□ 0.69
HOXA3-202ENST00000396352 G2E3Q7L622 706 aa19.35■□□□□ 0.69
HOXA3-202ENST00000396352 FOXO3O43524 673 aa19.34■□□□□ 0.69
HOXA3-202ENST00000396352 NUCB2P80303 420 aa19.34■□□□□ 0.69
HOXA3-202ENST00000396352 FAM208AQ9UK61 1670 aaKnown RBP19.34■□□□□ 0.69
HOXA3-202ENST00000396352 LRRC37A3O60309 1634 aa19.34■□□□□ 0.69
HOXA3-202ENST00000396352 OSBPL3Q9H4L5 887 aa19.33■□□□□ 0.69
HOXA3-202ENST00000396352 DDX49Q9Y6V7 483 aaKnown RBP19.33■□□□□ 0.69
HOXA3-202ENST00000396352 NUTM2FA1L443 756 aa19.33■□□□□ 0.68
HOXA3-202ENST00000396352 MTHFSDQ2M296 383 aaKnown RBP19.33■□□□□ 0.68
HOXA3-202ENST00000396352 XRN1Q8IZH2 1706 aaKnown RBP19.33■□□□□ 0.68
HOXA3-202ENST00000396352 KDRP35968 1356 aa19.32■□□□□ 0.68
HOXA3-202ENST00000396352 F6X3S4 739 aa19.32■□□□□ 0.68
HOXA3-202ENST00000396352 REC8O95072 547 aa19.32■□□□□ 0.68
HOXA3-202ENST00000396352 CEP170BQ9Y4F5 1589 aaPredicted RBP19.32■□□□□ 0.68
HOXA3-202ENST00000396352 HMMRO75330 724 aa19.31■□□□□ 0.68
HOXA3-202ENST00000396352 MCTP1Q6DN14 999 aa19.31■□□□□ 0.68
HOXA3-202ENST00000396352 ERC2O15083 957 aa19.31■□□□□ 0.68
HOXA3-202ENST00000396352 ST18O60284 1047 aa19.31■□□□□ 0.68
HOXA3-202ENST00000396352 ZGPATQ8N5A5 531 aaKnown RBP19.31■□□□□ 0.68
HOXA3-202ENST00000396352 CWC22Q9HCG8 908 aaKnown RBP19.31■□□□□ 0.68
HOXA3-202ENST00000396352 N4BP2Q86UW6 1770 aaPredicted RBP19.31■□□□□ 0.68
HOXA3-202ENST00000396352 CCT4P50991 539 aaKnown RBP19.31■□□□□ 0.68
HOXA3-202ENST00000396352 PDE1AP54750 535 aa19.31■□□□□ 0.68
HOXA3-202ENST00000396352 LMBRD1Q9NUN5 540 aa19.31■□□□□ 0.68
HOXA3-202ENST00000396352 TSPYL4Q9UJ04 414 aa19.31■□□□□ 0.68
HOXA3-202ENST00000396352 ESF1Q9H501 851 aaKnown RBP19.3■□□□□ 0.68
HOXA3-202ENST00000396352 SALL3Q9BXA9 1300 aa19.3■□□□□ 0.68
HOXA3-202ENST00000396352 SOX12O15370 315 aa19.3■□□□□ 0.68
HOXA3-202ENST00000396352 SLC4A10Q6U841 1118 aa19.29■□□□□ 0.68
HOXA3-202ENST00000396352 PTPRUQ92729 1446 aa19.29■□□□□ 0.68
HOXA3-202ENST00000396352 PLEKHG1Q9ULL1 1385 aa19.29■□□□□ 0.68
HOXA3-202ENST00000396352 TRIM44Q96DX7 344 aaPredicted RBP19.29■□□□□ 0.68
HOXA3-202ENST00000396352 ZDHHC9Q9Y397 364 aa19.29■□□□□ 0.68
HOXA3-202ENST00000396352 SBNO1A3KN83 1393 aa19.29■□□□□ 0.68
HOXA3-202ENST00000396352 PPP1R9BQ96SB3 815 aa19.29■□□□□ 0.68
HOXA3-202ENST00000396352 FLT4P35916 1363 aa19.28■□□□□ 0.68
HOXA3-202ENST00000396352 RGPD8O14715 1765 aaPredicted RBP19.28■□□□□ 0.68
HOXA3-202ENST00000396352 NASPP49321 788 aaPredicted RBP19.28■□□□□ 0.68
HOXA3-202ENST00000396352 ZNF445P59923 1031 aa19.28■□□□□ 0.68
HOXA3-202ENST00000396352 PIK3C2AO00443 1686 aa19.28■□□□□ 0.68
HOXA3-202ENST00000396352 NAP1L5Q96NT1 182 aaPredicted RBP19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms