RNA–Protein interactions for RNA: ENST00000395757.5

SREBF1-205, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SREBF1, Length 3,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-205ENST00000395757 CHAMP1Q96JM3 812 aa17.74■□□□□ 0.43
SREBF1-205ENST00000395757 UPF3BQ9BZI7 483 aaKnown RBP17.74■□□□□ 0.43
SREBF1-205ENST00000395757 CAMSAP1Q5T5Y3 1602 aa17.73■□□□□ 0.43
SREBF1-205ENST00000395757 NEK4P51957 841 aa17.73■□□□□ 0.43
SREBF1-205ENST00000395757 NAP1L5Q96NT1 182 aaPredicted RBP17.73■□□□□ 0.43
SREBF1-205ENST00000395757 LRRFIP2Q9Y608 721 aaKnown RBP17.73■□□□□ 0.43
SREBF1-205ENST00000395757 ANP32BQ92688 251 aaKnown RBP17.73■□□□□ 0.43
SREBF1-205ENST00000395757 JARID2Q92833 1246 aaPredicted RBP17.73■□□□□ 0.43
SREBF1-205ENST00000395757 UBTFL1P0CB47 393 aaPredicted RBP17.73■□□□□ 0.43
SREBF1-205ENST00000395757 PIP4K2AP48426 406 aaPredicted RBP17.72■□□□□ 0.43
SREBF1-205ENST00000395757 NEXMIFQ5QGS0 1516 aa17.72■□□□□ 0.43
SREBF1-205ENST00000395757 DEPDC5O75140 1603 aa17.72■□□□□ 0.43
SREBF1-205ENST00000395757 INTS3Q68E01 1043 aaKnown RBP17.72■□□□□ 0.43
SREBF1-205ENST00000395757 GAS2L2Q8NHY3 880 aa17.72■□□□□ 0.43
SREBF1-205ENST00000395757 GNAI2P04899 355 aa17.71■□□□□ 0.43
SREBF1-205ENST00000395757 ZNF530Q6P9A1 599 aaPredicted RBP17.71■□□□□ 0.43
SREBF1-205ENST00000395757 SDSP20132 328 aa17.71■□□□□ 0.43
SREBF1-205ENST00000395757 FLIIQ13045 1269 aa17.71■□□□□ 0.43
SREBF1-205ENST00000395757 TNPO1Q92973 898 aaKnown RBP17.71■□□□□ 0.43
SREBF1-205ENST00000395757 PHAXQ9H814 394 aaKnown RBP17.71■□□□□ 0.43
SREBF1-205ENST00000395757 CHMP3Q9Y3E7 222 aa17.71■□□□□ 0.43
SREBF1-205ENST00000395757 DIP2CQ9Y2E4 1556 aa17.71■□□□□ 0.43
SREBF1-205ENST00000395757 BMP2KLQ5H9B9 411 aa17.71■□□□□ 0.43
SREBF1-205ENST00000395757 NLRP2Q9NX02 1062 aa17.71■□□□□ 0.43
SREBF1-205ENST00000395757 GNAT3A8MTJ3 354 aa17.7■□□□□ 0.42
SREBF1-205ENST00000395757 L1TD1Q5T7N2 865 aaKnown RBP17.7■□□□□ 0.42
SREBF1-205ENST00000395757 C9orf78Q9NZ63 289 aaPredicted RBP17.7■□□□□ 0.42
SREBF1-205ENST00000395757 PLEKHM2Q8IWE5 1019 aa17.7■□□□□ 0.42
SREBF1-205ENST00000395757 MSH6P52701 1360 aa17.7■□□□□ 0.42
SREBF1-205ENST00000395757 SETD1BQ9UPS6 1966 aaKnown RBP17.7■□□□□ 0.42
SREBF1-205ENST00000395757 CCDC30Q5VVM6 783 aa17.7■□□□□ 0.42
SREBF1-205ENST00000395757 SIL1Q9H173 461 aa17.7■□□□□ 0.42
SREBF1-205ENST00000395757 PTPRMP28827 1452 aa17.7■□□□□ 0.42
SREBF1-205ENST00000395757 NRXN1Q9ULB1 1477 aa17.69■□□□□ 0.42
SREBF1-205ENST00000395757 K7ELQ4 463 aaPredicted RBP17.69■□□□□ 0.42
SREBF1-205ENST00000395757 C1orf141Q5JVX7 400 aa17.69■□□□□ 0.42
SREBF1-205ENST00000395757 CEP85Q6P2H3 762 aa17.69■□□□□ 0.42
SREBF1-205ENST00000395757 MPNDQ8N594 471 aa17.69■□□□□ 0.42
SREBF1-205ENST00000395757 GSPT1P15170 499 aaKnown RBP17.69■□□□□ 0.42
SREBF1-205ENST00000395757 EDC4Q6P2E9 1401 aaKnown RBP17.68■□□□□ 0.42
SREBF1-205ENST00000395757 ST18O60284 1047 aa17.68■□□□□ 0.42
SREBF1-205ENST00000395757 MYL6BP14649 208 aa17.68■□□□□ 0.42
SREBF1-205ENST00000395757 ALKQ9UM73 1620 aa17.68■□□□□ 0.42
SREBF1-205ENST00000395757 SRGAP3O43295 1099 aa17.68■□□□□ 0.42
SREBF1-205ENST00000395757 PIK3C2BO00750 1634 aa17.67■□□□□ 0.42
SREBF1-205ENST00000395757 A2ML1A8K2U0 1454 aa17.67■□□□□ 0.42
SREBF1-205ENST00000395757 TAF7Q15545 349 aaPredicted RBP17.67■□□□□ 0.42
SREBF1-205ENST00000395757 NAP1L2Q9ULW6 460 aaPredicted RBP17.67■□□□□ 0.42
SREBF1-205ENST00000395757 PHF8Q9UPP1 1060 aa17.67■□□□□ 0.42
SREBF1-205ENST00000395757 DDX17Q92841 729 aaKnown RBP17.67■□□□□ 0.42
SREBF1-205ENST00000395757 LGR6Q9HBX8 967 aa17.67■□□□□ 0.42
SREBF1-205ENST00000395757 LMTK2Q8IWU2 1503 aa17.66■□□□□ 0.42
SREBF1-205ENST00000395757 KCNQ3O43525 872 aa17.66■□□□□ 0.42
SREBF1-205ENST00000395757 ZFYVE9O95405 1425 aa17.66■□□□□ 0.42
SREBF1-205ENST00000395757 CHL1O00533 1208 aa17.66■□□□□ 0.42
SREBF1-205ENST00000395757 CAVIN1Q6NZI2 390 aaKnown RBP17.66■□□□□ 0.42
SREBF1-205ENST00000395757 DDX11L8A8MPP1 907 aa17.65■□□□□ 0.42
SREBF1-205ENST00000395757 TTC22Q5TAA0 569 aa17.65■□□□□ 0.42
SREBF1-205ENST00000395757 RPAP2Q8IXW5 612 aaPredicted RBP17.65■□□□□ 0.42
SREBF1-205ENST00000395757 ANKRD44Q8N8A2 993 aa17.65■□□□□ 0.42
SREBF1-205ENST00000395757 TMEM2Q9UHN6 1383 aa17.65■□□□□ 0.42
SREBF1-205ENST00000395757 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.65■□□□□ 0.42
SREBF1-205ENST00000395757 PNMA6EA0A0J9YXQ4 647 aa17.65■□□□□ 0.42
SREBF1-205ENST00000395757 PRPF40AO75400 957 aaKnown RBP17.65■□□□□ 0.42
SREBF1-205ENST00000395757 LRRCC1Q9C099 1032 aa17.65■□□□□ 0.42
SREBF1-205ENST00000395757 REC8O95072 547 aa17.65■□□□□ 0.42
SREBF1-205ENST00000395757 KIAA1211Q6ZU35 1233 aa17.65■□□□□ 0.42
SREBF1-205ENST00000395757 PAXIP1Q6ZW49 1069 aaPredicted RBP17.65■□□□□ 0.42
SREBF1-205ENST00000395757 MCCP23508 829 aa17.64■□□□□ 0.41
SREBF1-205ENST00000395757 ZGPATQ8N5A5 531 aaKnown RBP17.64■□□□□ 0.41
SREBF1-205ENST00000395757 RNF214Q8ND24 703 aa17.64■□□□□ 0.41
SREBF1-205ENST00000395757 ARHGAP45Q92619 1136 aa17.64■□□□□ 0.41
SREBF1-205ENST00000395757 IQSEC2Q5JU85 1478 aa17.64■□□□□ 0.41
SREBF1-205ENST00000395757 PI4KAP2A4QPH2 592 aa17.64■□□□□ 0.41
SREBF1-205ENST00000395757 PI4KAP1Q8N8J0 262 aa17.64■□□□□ 0.41
SREBF1-205ENST00000395757 ORAI2Q96SN7 254 aa17.64■□□□□ 0.41
SREBF1-205ENST00000395757 DCTPP1Q9H773 170 aa17.64■□□□□ 0.41
SREBF1-205ENST00000395757 LRRC7Q96NW7 1537 aa17.64■□□□□ 0.41
SREBF1-205ENST00000395757 CABLES1Q8TDN4 633 aa17.63■□□□□ 0.41
SREBF1-205ENST00000395757 SETBP1Q9Y6X0 1596 aa17.63■□□□□ 0.41
SREBF1-205ENST00000395757 SLC39A6Q13433 755 aa17.63■□□□□ 0.41
SREBF1-205ENST00000395757 PROSER2Q86WR7 435 aaPredicted RBP17.63■□□□□ 0.41
SREBF1-205ENST00000395757 BTBD11A6QL63 1104 aa17.63■□□□□ 0.41
SREBF1-205ENST00000395757 CCT4P50991 539 aaKnown RBP17.62■□□□□ 0.41
SREBF1-205ENST00000395757 CHPF2Q9P2E5 772 aa17.62■□□□□ 0.41
SREBF1-205ENST00000395757 PPP6R1Q9UPN7 881 aa17.62■□□□□ 0.41
SREBF1-205ENST00000395757 SIGLEC1Q9BZZ2 1709 aa17.62■□□□□ 0.41
SREBF1-205ENST00000395757 PPLO60437 1756 aa17.62■□□□□ 0.41
SREBF1-205ENST00000395757 ARHGAP31Q2M1Z3 1444 aa17.62■□□□□ 0.41
SREBF1-205ENST00000395757 GNAI3P08754 354 aa17.62■□□□□ 0.41
SREBF1-205ENST00000395757 GDPD2Q9HCC8 539 aa17.62■□□□□ 0.41
SREBF1-205ENST00000395757 FAM135BQ49AJ0 1406 aa17.62■□□□□ 0.41
SREBF1-205ENST00000395757 ZNF853P0CG23 659 aa17.61■□□□□ 0.41
SREBF1-205ENST00000395757 HOXC9P31274 260 aa17.61■□□□□ 0.41
SREBF1-205ENST00000395757 CWC27Q6UX04 472 aaKnown RBP17.61■□□□□ 0.41
SREBF1-205ENST00000395757 SRCIN1Q9C0H9 1055 aa17.61■□□□□ 0.41
SREBF1-205ENST00000395757 CD163L1Q9NR16 1453 aa17.61■□□□□ 0.41
SREBF1-205ENST00000395757 PKP1Q13835 747 aa17.61■□□□□ 0.41
SREBF1-205ENST00000395757 CHRNA2Q15822 529 aa17.61■□□□□ 0.41
SREBF1-205ENST00000395757 ARHGEF40Q8TER5 1519 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms