RNA–Protein interactions for RNA: ENST00000395756.5

SREBF1-204, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 3,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-204ENST00000395756 API5Q9BZZ5 524 aaKnown RBP22.54■■□□□ 1.2
SREBF1-204ENST00000395756 ARHGAP45Q92619 1136 aa22.53■■□□□ 1.2
SREBF1-204ENST00000395756 F6X3S4 739 aa22.53■■□□□ 1.2
SREBF1-204ENST00000395756 LRRC59Q96AG4 307 aaKnown RBP22.53■■□□□ 1.2
SREBF1-204ENST00000395756 IGSF1Q8N6C5 1336 aa22.53■■□□□ 1.2
SREBF1-204ENST00000395756 TOPAZ1Q8N9V7 1692 aa22.52■■□□□ 1.2
SREBF1-204ENST00000395756 BRPF1P55201 1214 aaPredicted RBP22.52■■□□□ 1.2
SREBF1-204ENST00000395756 SMC5Q8IY18 1101 aa22.52■■□□□ 1.2
SREBF1-204ENST00000395756 GAS2L2Q8NHY3 880 aa22.52■■□□□ 1.2
SREBF1-204ENST00000395756 NRKQ7Z2Y5 1582 aa22.52■■□□□ 1.2
SREBF1-204ENST00000395756 MFAP1P55081 439 aaKnown RBP22.52■■□□□ 1.19
SREBF1-204ENST00000395756 G2E3Q7L622 706 aa22.52■■□□□ 1.19
SREBF1-204ENST00000395756 USP19O94966 1318 aa22.51■■□□□ 1.19
SREBF1-204ENST00000395756 PIK3R4Q99570 1358 aa22.51■■□□□ 1.19
SREBF1-204ENST00000395756 RTL5Q5HYW3 569 aaPredicted RBP22.51■■□□□ 1.19
SREBF1-204ENST00000395756 SIRT2Q8IXJ6 389 aa22.51■■□□□ 1.19
SREBF1-204ENST00000395756 DDX17Q92841 729 aaKnown RBP22.51■■□□□ 1.19
SREBF1-204ENST00000395756 ARHGEF10O15013 1369 aa22.5■■□□□ 1.19
SREBF1-204ENST00000395756 GNAT3A8MTJ3 354 aa22.5■■□□□ 1.19
SREBF1-204ENST00000395756 NBPF6Q5VWK0 638 aa22.5■■□□□ 1.19
SREBF1-204ENST00000395756 NBPF4Q96M43 638 aa22.5■■□□□ 1.19
SREBF1-204ENST00000395756 UPF2Q9HAU5 1272 aaKnown RBP22.49■■□□□ 1.19
SREBF1-204ENST00000395756 CHD1LQ86WJ1 897 aa22.49■■□□□ 1.19
SREBF1-204ENST00000395756 ABCC4O15439 1325 aa22.49■■□□□ 1.19
SREBF1-204ENST00000395756 IL17REQ8NFR9 667 aa22.49■■□□□ 1.19
SREBF1-204ENST00000395756 DLG5Q8TDM6 1919 aa22.48■■□□□ 1.19
SREBF1-204ENST00000395756 ANKARQ7Z5J8 1434 aa22.48■■□□□ 1.19
SREBF1-204ENST00000395756 NUCB1Q02818 461 aa22.47■■□□□ 1.19
SREBF1-204ENST00000395756 CRB1P82279 1406 aa22.46■■□□□ 1.19
SREBF1-204ENST00000395756 NPHP4O75161 1426 aaPredicted RBP22.46■■□□□ 1.19
SREBF1-204ENST00000395756 SETD1BQ9UPS6 1966 aaKnown RBP22.46■■□□□ 1.19
SREBF1-204ENST00000395756 SPRYD3Q8NCJ5 442 aa22.45■■□□□ 1.18
SREBF1-204ENST00000395756 XRN1Q8IZH2 1706 aaKnown RBP22.45■■□□□ 1.18
SREBF1-204ENST00000395756 ZC3H6P61129 1189 aaKnown RBP22.45■■□□□ 1.18
SREBF1-204ENST00000395756 MEIS3Q99687 375 aa22.45■■□□□ 1.18
SREBF1-204ENST00000395756 PIK3C2AO00443 1686 aa22.45■■□□□ 1.18
SREBF1-204ENST00000395756 HSPA2P54652 639 aa22.44■■□□□ 1.18
SREBF1-204ENST00000395756 GCP02774 474 aa22.44■■□□□ 1.18
SREBF1-204ENST00000395756 IP6K1Q92551 441 aa22.44■■□□□ 1.18
SREBF1-204ENST00000395756 CHMP4BQ9H444 224 aaKnown RBP22.44■■□□□ 1.18
SREBF1-204ENST00000395756 LGR6Q9HBX8 967 aa22.44■■□□□ 1.18
SREBF1-204ENST00000395756 KDRP35968 1356 aa22.43■■□□□ 1.18
SREBF1-204ENST00000395756 EIF2S2P20042 333 aaKnown RBP22.43■■□□□ 1.18
SREBF1-204ENST00000395756 HAP1P54257 671 aaPredicted RBP22.43■■□□□ 1.18
SREBF1-204ENST00000395756 KRT28Q7Z3Y7 464 aa22.42■■□□□ 1.18
SREBF1-204ENST00000395756 STK31Q9BXU1 1019 aa22.42■■□□□ 1.18
SREBF1-204ENST00000395756 SLKQ9H2G2 1235 aaPredicted RBP22.41■■□□□ 1.18
SREBF1-204ENST00000395756 FKBP5Q13451 457 aaPredicted RBP22.41■■□□□ 1.18
SREBF1-204ENST00000395756 MPRIPQ6WCQ1 1025 aa22.41■■□□□ 1.18
SREBF1-204ENST00000395756 C16orf71Q8IYS4 520 aaPredicted RBP22.41■■□□□ 1.18
SREBF1-204ENST00000395756 INTS3Q68E01 1043 aaKnown RBP22.39■■□□□ 1.17
SREBF1-204ENST00000395756 GCC1Q96CN9 775 aa22.39■■□□□ 1.17
SREBF1-204ENST00000395756 ADGRL3Q9HAR2 1447 aa22.39■■□□□ 1.17
SREBF1-204ENST00000395756 TAF7Q15545 349 aaPredicted RBP22.39■■□□□ 1.17
SREBF1-204ENST00000395756 KCNH5Q8NCM2 988 aa22.39■■□□□ 1.17
SREBF1-204ENST00000395756 AXIN2Q9Y2T1 843 aa22.38■■□□□ 1.17
SREBF1-204ENST00000395756 MSH6P52701 1360 aa22.38■■□□□ 1.17
SREBF1-204ENST00000395756 KIAA0232Q92628 1395 aa22.38■■□□□ 1.17
SREBF1-204ENST00000395756 SMARCA5O60264 1052 aaPredicted RBP22.38■■□□□ 1.17
SREBF1-204ENST00000395756 CABLES1Q8TDN4 633 aa22.37■■□□□ 1.17
SREBF1-204ENST00000395756 PODXL2Q9NZ53 605 aa22.37■■□□□ 1.17
SREBF1-204ENST00000395756 KCNQ3O43525 872 aa22.37■■□□□ 1.17
SREBF1-204ENST00000395756 NALCNQ8IZF0 1738 aa22.37■■□□□ 1.17
SREBF1-204ENST00000395756 TBC1D32Q96NH3 1257 aa22.36■■□□□ 1.17
SREBF1-204ENST00000395756 C22orf23Q9BZE7 217 aa22.36■■□□□ 1.17
SREBF1-204ENST00000395756 ZNF530Q6P9A1 599 aaPredicted RBP22.36■■□□□ 1.17
SREBF1-204ENST00000395756 MAP3K5Q99683 1374 aa22.36■■□□□ 1.17
SREBF1-204ENST00000395756 ATF3P18847 181 aa22.35■■□□□ 1.17
SREBF1-204ENST00000395756 ANXA1P04083 346 aa22.35■■□□□ 1.17
SREBF1-204ENST00000395756 FLIIQ13045 1269 aa22.35■■□□□ 1.17
SREBF1-204ENST00000395756 ANKRD24Q8TF21 1146 aa22.35■■□□□ 1.17
SREBF1-204ENST00000395756 C19orf44Q9H6X5 657 aa22.35■■□□□ 1.17
SREBF1-204ENST00000395756 PTPRCP08575 1304 aa22.34■■□□□ 1.17
SREBF1-204ENST00000395756 FMN2Q9NZ56 1722 aa22.34■■□□□ 1.17
SREBF1-204ENST00000395756 OTUD7AQ8TE49 926 aaPredicted RBP22.34■■□□□ 1.17
SREBF1-204ENST00000395756 CCDC30Q5VVM6 783 aa22.34■■□□□ 1.17
SREBF1-204ENST00000395756 HDGFL1Q5TGJ6 251 aa22.33■■□□□ 1.17
SREBF1-204ENST00000395756 CEP85Q6P2H3 762 aa22.33■■□□□ 1.17
SREBF1-204ENST00000395756 PHAXQ9H814 394 aaKnown RBP22.33■■□□□ 1.17
SREBF1-204ENST00000395756 TEFQ10587 303 aa22.33■■□□□ 1.16
SREBF1-204ENST00000395756 ARHGEF25Q86VW2 580 aa22.32■■□□□ 1.16
SREBF1-204ENST00000395756 HTATSF1O43719 755 aaKnown RBP22.32■■□□□ 1.16
SREBF1-204ENST00000395756 BECN1Q14457 450 aa22.32■■□□□ 1.16
SREBF1-204ENST00000395756 DNAJC5Q9H3Z4 198 aa22.32■■□□□ 1.16
SREBF1-204ENST00000395756 RGS12O14924 1447 aa22.31■■□□□ 1.16
SREBF1-204ENST00000395756 RGPD1P0DJD0 1748 aa22.31■■□□□ 1.16
SREBF1-204ENST00000395756 CHD2O14647 1828 aaKnown RBP22.31■■□□□ 1.16
SREBF1-204ENST00000395756 NFKBIBQ15653 356 aa22.31■■□□□ 1.16
SREBF1-204ENST00000395756 ANKRD44Q8N8A2 993 aa22.31■■□□□ 1.16
SREBF1-204ENST00000395756 DCTPP1Q9H773 170 aa22.3■■□□□ 1.16
SREBF1-204ENST00000395756 CHRNA2Q15822 529 aa22.29■■□□□ 1.16
SREBF1-204ENST00000395756 TBC1D2Q9BYX2 928 aa22.29■■□□□ 1.16
SREBF1-204ENST00000395756 NLRP2Q9NX02 1062 aa22.29■■□□□ 1.16
SREBF1-204ENST00000395756 RTL1A6NKG5 1358 aa22.29■■□□□ 1.16
SREBF1-204ENST00000395756 BTBD11A6QL63 1104 aa22.28■■□□□ 1.16
SREBF1-204ENST00000395756 ADAMTSL3P82987 1691 aa22.28■■□□□ 1.16
SREBF1-204ENST00000395756 PLEKHO1Q53GL0 409 aaPredicted RBP22.28■■□□□ 1.16
SREBF1-204ENST00000395756 C1orf141Q5JVX7 400 aa22.28■■□□□ 1.16
SREBF1-204ENST00000395756 EXOC6BQ9Y2D4 811 aa22.28■■□□□ 1.16
SREBF1-204ENST00000395756 KIF24Q5T7B8 1368 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms