RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 C22orf23Q9BZE7 217 aa19.44■□□□□ 0.7
PTBP1-204ENST00000394601 LMOD3Q0VAK6 560 aa19.44■□□□□ 0.7
PTBP1-204ENST00000394601 HSP90AB2PQ58FF8 381 aa19.44■□□□□ 0.7
PTBP1-204ENST00000394601 UPF2Q9HAU5 1272 aaKnown RBP19.44■□□□□ 0.7
PTBP1-204ENST00000394601 DIP2AQ14689 1571 aa19.44■□□□□ 0.7
PTBP1-204ENST00000394601 CHL1O00533 1208 aa19.44■□□□□ 0.7
PTBP1-204ENST00000394601 LNPKQ9C0E8 428 aa19.44■□□□□ 0.7
PTBP1-204ENST00000394601 KIF24Q5T7B8 1368 aa19.43■□□□□ 0.7
PTBP1-204ENST00000394601 USP54Q70EL1 1684 aa19.43■□□□□ 0.7
PTBP1-204ENST00000394601 CEBPAP49715 358 aaPredicted RBP19.43■□□□□ 0.7
PTBP1-204ENST00000394601 SULT6B1Q6IMI4 303 aa19.43■□□□□ 0.7
PTBP1-204ENST00000394601 KRT24Q2M2I5 525 aa19.42■□□□□ 0.7
PTBP1-204ENST00000394601 ATP10DQ9P241 1426 aa19.41■□□□□ 0.7
PTBP1-204ENST00000394601 RRP9O43818 475 aaKnown RBP19.41■□□□□ 0.7
PTBP1-204ENST00000394601 RBM25P49756 843 aaKnown RBP19.41■□□□□ 0.7
PTBP1-204ENST00000394601 FAM13BQ9NYF5 915 aa19.41■□□□□ 0.7
PTBP1-204ENST00000394601 NCOA3Q9Y6Q9 1424 aa19.41■□□□□ 0.7
PTBP1-204ENST00000394601 BMP2KLQ5H9B9 411 aa19.41■□□□□ 0.7
PTBP1-204ENST00000394601 GCC1Q96CN9 775 aa19.41■□□□□ 0.7
PTBP1-204ENST00000394601 LRRC37A3O60309 1634 aa19.41■□□□□ 0.7
PTBP1-204ENST00000394601 MFAP1P55081 439 aaKnown RBP19.4■□□□□ 0.7
PTBP1-204ENST00000394601 SLC26A8Q96RN1 970 aa19.4■□□□□ 0.7
PTBP1-204ENST00000394601 KIAA0232Q92628 1395 aa19.4■□□□□ 0.7
PTBP1-204ENST00000394601 CEP170BQ9Y4F5 1589 aaPredicted RBP19.4■□□□□ 0.7
PTBP1-204ENST00000394601 KDRP35968 1356 aa19.4■□□□□ 0.7
PTBP1-204ENST00000394601 KIF2CQ99661 725 aa19.4■□□□□ 0.7
PTBP1-204ENST00000394601 NUTM2FA1L443 756 aa19.39■□□□□ 0.69
PTBP1-204ENST00000394601 FER1L4A9Z1Z3 1794 aa19.39■□□□□ 0.69
PTBP1-204ENST00000394601 NWD1Q149M9 1564 aa19.39■□□□□ 0.69
PTBP1-204ENST00000394601 INTS3Q68E01 1043 aaKnown RBP19.39■□□□□ 0.69
PTBP1-204ENST00000394601 ARHGEF10O15013 1369 aa19.39■□□□□ 0.69
PTBP1-204ENST00000394601 DDIT3P35638 169 aa19.38■□□□□ 0.69
PTBP1-204ENST00000394601 MCM10Q7L590 875 aa19.38■□□□□ 0.69
PTBP1-204ENST00000394601 MAP3K19Q56UN5 1328 aa19.38■□□□□ 0.69
PTBP1-204ENST00000394601 TRAK2O60296 914 aa19.37■□□□□ 0.69
PTBP1-204ENST00000394601 AMOTL2Q9Y2J4 779 aa19.37■□□□□ 0.69
PTBP1-204ENST00000394601 ESPNB1AK53 854 aa19.37■□□□□ 0.69
PTBP1-204ENST00000394601 TBX22Q9Y458 520 aa19.36■□□□□ 0.69
PTBP1-204ENST00000394601 API5Q9BZZ5 524 aaKnown RBP19.36■□□□□ 0.69
PTBP1-204ENST00000394601 ANKRD45Q5TZF3 282 aa19.36■□□□□ 0.69
PTBP1-204ENST00000394601 TTC21AQ8NDW8 1320 aa19.35■□□□□ 0.69
PTBP1-204ENST00000394601 PRDM10Q9NQV6 1147 aa19.35■□□□□ 0.69
PTBP1-204ENST00000394601 CLCN1P35523 988 aa19.34■□□□□ 0.69
PTBP1-204ENST00000394601 CHMP4BQ9H444 224 aaKnown RBP19.34■□□□□ 0.69
PTBP1-204ENST00000394601 SBNO1A3KN83 1393 aa19.34■□□□□ 0.69
PTBP1-204ENST00000394601 ERBB4Q15303 1308 aa19.34■□□□□ 0.69
PTBP1-204ENST00000394601 FOXO3O43524 673 aa19.34■□□□□ 0.69
PTBP1-204ENST00000394601 DCTPP1Q9H773 170 aa19.33■□□□□ 0.69
PTBP1-204ENST00000394601 GSPT1P15170 499 aaKnown RBP19.33■□□□□ 0.68
PTBP1-204ENST00000394601 MTHFSDQ2M296 383 aaKnown RBP19.32■□□□□ 0.68
PTBP1-204ENST00000394601 IGSF1Q8N6C5 1336 aa19.32■□□□□ 0.68
PTBP1-204ENST00000394601 MCM4P33991 863 aa19.32■□□□□ 0.68
PTBP1-204ENST00000394601 NCLP19338 710 aaKnown RBP19.32■□□□□ 0.68
PTBP1-204ENST00000394601 KIAA1211Q6ZU35 1233 aa19.32■□□□□ 0.68
PTBP1-204ENST00000394601 FLT4P35916 1363 aa19.31■□□□□ 0.68
PTBP1-204ENST00000394601 TBC1D9Q6ZT07 1266 aa19.31■□□□□ 0.68
PTBP1-204ENST00000394601 SNX21Q969T3 373 aa19.31■□□□□ 0.68
PTBP1-204ENST00000394601 FAM208AQ9UK61 1670 aaKnown RBP19.31■□□□□ 0.68
PTBP1-204ENST00000394601 RTL1A6NKG5 1358 aa19.31■□□□□ 0.68
PTBP1-204ENST00000394601 MSH6P52701 1360 aa19.31■□□□□ 0.68
PTBP1-204ENST00000394601 PLEKHM2Q8IWE5 1019 aa19.3■□□□□ 0.68
PTBP1-204ENST00000394601 TUBGCP6Q96RT7 1819 aa19.3■□□□□ 0.68
PTBP1-204ENST00000394601 N4BP2Q86UW6 1770 aaPredicted RBP19.3■□□□□ 0.68
PTBP1-204ENST00000394601 GRPEL1Q9HAV7 217 aa19.3■□□□□ 0.68
PTBP1-204ENST00000394601 ANKRD44Q8N8A2 993 aa19.29■□□□□ 0.68
PTBP1-204ENST00000394601 EYA1Q99502 592 aa19.29■□□□□ 0.68
PTBP1-204ENST00000394601 ANKARQ7Z5J8 1434 aa19.28■□□□□ 0.68
PTBP1-204ENST00000394601 CEP85Q6P2H3 762 aa19.28■□□□□ 0.68
PTBP1-204ENST00000394601 MIS18AQ9NYP9 233 aa19.28■□□□□ 0.68
PTBP1-204ENST00000394601 PTPRCP08575 1304 aa19.28■□□□□ 0.68
PTBP1-204ENST00000394601 CD2BP2O95400 341 aaKnown RBP19.28■□□□□ 0.68
PTBP1-204ENST00000394601 EID1Q9Y6B2 187 aa19.28■□□□□ 0.68
PTBP1-204ENST00000394601 ZHX1Q9UKY1 873 aaPredicted RBP19.28■□□□□ 0.68
PTBP1-204ENST00000394601 TPRNQ4KMQ1 711 aa19.26■□□□□ 0.67
PTBP1-204ENST00000394601 C16orf71Q8IYS4 520 aaPredicted RBP19.26■□□□□ 0.67
PTBP1-204ENST00000394601 SOX12O15370 315 aa19.26■□□□□ 0.67
PTBP1-204ENST00000394601 G2E3Q7L622 706 aa19.26■□□□□ 0.67
PTBP1-204ENST00000394601 R3HCC1Q9Y3T6 440 aaKnown RBP19.26■□□□□ 0.67
PTBP1-204ENST00000394601 CHD2O14647 1828 aaKnown RBP19.25■□□□□ 0.67
PTBP1-204ENST00000394601 MEIS3Q99687 375 aa19.25■□□□□ 0.67
PTBP1-204ENST00000394601 OTUD7AQ8TE49 926 aaPredicted RBP19.24■□□□□ 0.67
PTBP1-204ENST00000394601 LTN1O94822 1766 aa19.24■□□□□ 0.67
PTBP1-204ENST00000394601 MRE11P49959 708 aa19.23■□□□□ 0.67
PTBP1-204ENST00000394601 RPAP2Q8IXW5 612 aaPredicted RBP19.23■□□□□ 0.67
PTBP1-204ENST00000394601 CHMP5Q9NZZ3 219 aa19.23■□□□□ 0.67
PTBP1-204ENST00000394601 CACNA1FO60840 1977 aa19.23■□□□□ 0.67
PTBP1-204ENST00000394601 SLC4A2P04920 1241 aa19.22■□□□□ 0.67
PTBP1-204ENST00000394601 KCNA6P17658 529 aa19.22■□□□□ 0.67
PTBP1-204ENST00000394601 TTC22Q5TAA0 569 aa19.22■□□□□ 0.67
PTBP1-204ENST00000394601 MPNDQ8N594 471 aa19.22■□□□□ 0.67
PTBP1-204ENST00000394601 HOXC9P31274 260 aa19.21■□□□□ 0.67
PTBP1-204ENST00000394601 RBM42Q9BTD8 480 aaKnown RBP19.21■□□□□ 0.67
PTBP1-204ENST00000394601 HAP1P54257 671 aaPredicted RBP19.2■□□□□ 0.66
PTBP1-204ENST00000394601 THEMISQ8N1K5 641 aaPredicted RBP19.2■□□□□ 0.66
PTBP1-204ENST00000394601 NFAT5O94916 1531 aa19.2■□□□□ 0.66
PTBP1-204ENST00000394601 MSNP26038 577 aaKnown RBP19.2■□□□□ 0.66
PTBP1-204ENST00000394601 NGDNQ8NEJ9 315 aaKnown RBP19.2■□□□□ 0.66
PTBP1-204ENST00000394601 MED1Q15648 1581 aaPredicted RBP19.2■□□□□ 0.66
PTBP1-204ENST00000394601 GAS2L3Q86XJ1 694 aa19.2■□□□□ 0.66
PTBP1-204ENST00000394601 HSCBQ8IWL3 235 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms