RNA–Protein interactions for RNA: ENST00000394164.5

PSEN1-204, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-204ENST00000394164 MED14O60244 1454 aa12.32□□□□□ -0.44
PSEN1-204ENST00000394164 SLC4A10Q6U841 1118 aa12.32□□□□□ -0.44
PSEN1-204ENST00000394164 CHD1LQ86WJ1 897 aa12.32□□□□□ -0.44
PSEN1-204ENST00000394164 ZNF692Q9BU19 519 aaPredicted RBP12.32□□□□□ -0.44
PSEN1-204ENST00000394164 AMPHP49418 695 aa12.32□□□□□ -0.44
PSEN1-204ENST00000394164 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.32□□□□□ -0.44
PSEN1-204ENST00000394164 CCDC173Q0VFZ6 552 aa12.31□□□□□ -0.44
PSEN1-204ENST00000394164 SMC5Q8IY18 1101 aa12.31□□□□□ -0.44
PSEN1-204ENST00000394164 NRXN3Q9Y4C0 1643 aa12.31□□□□□ -0.44
PSEN1-204ENST00000394164 SIRT2Q8IXJ6 389 aa12.31□□□□□ -0.44
PSEN1-204ENST00000394164 JARID2Q92833 1246 aaPredicted RBP12.31□□□□□ -0.44
PSEN1-204ENST00000394164 AGLP35573 1532 aa12.31□□□□□ -0.44
PSEN1-204ENST00000394164 NLRP6P59044 892 aa12.3□□□□□ -0.44
PSEN1-204ENST00000394164 ANKRD26Q9UPS8 1709 aa12.3□□□□□ -0.44
PSEN1-204ENST00000394164 C16orf71Q8IYS4 520 aaPredicted RBP12.3□□□□□ -0.44
PSEN1-204ENST00000394164 GBP4Q96PP9 640 aa12.3□□□□□ -0.44
PSEN1-204ENST00000394164 F6X3S4 739 aa12.29□□□□□ -0.44
PSEN1-204ENST00000394164 NUCB1Q02818 461 aa12.29□□□□□ -0.44
PSEN1-204ENST00000394164 NCBP3Q53F19 620 aaKnown RBP12.29□□□□□ -0.44
PSEN1-204ENST00000394164 USHBP1Q8N6Y0 703 aa12.29□□□□□ -0.44
PSEN1-204ENST00000394164 MAP3K19Q56UN5 1328 aa12.29□□□□□ -0.44
PSEN1-204ENST00000394164 ZNF853P0CG23 659 aa12.29□□□□□ -0.44
PSEN1-204ENST00000394164 DDX49Q9Y6V7 483 aaKnown RBP12.29□□□□□ -0.44
PSEN1-204ENST00000394164 SSFA2P28290 1259 aa12.29□□□□□ -0.44
PSEN1-204ENST00000394164 FGD1P98174 961 aa12.29□□□□□ -0.44
PSEN1-204ENST00000394164 LMOD3Q0VAK6 560 aa12.29□□□□□ -0.44
PSEN1-204ENST00000394164 SMARCA5O60264 1052 aaPredicted RBP12.28□□□□□ -0.44
PSEN1-204ENST00000394164 SLC4A2P04920 1241 aa12.28□□□□□ -0.44
PSEN1-204ENST00000394164 ADAMTS13Q76LX8 1427 aa12.28□□□□□ -0.44
PSEN1-204ENST00000394164 MTHFSDQ2M296 383 aaKnown RBP12.28□□□□□ -0.44
PSEN1-204ENST00000394164 TSC1Q92574 1164 aa12.28□□□□□ -0.44
PSEN1-204ENST00000394164 DLC1Q96QB1 1528 aa12.28□□□□□ -0.44
PSEN1-204ENST00000394164 MPNDQ8N594 471 aa12.27□□□□□ -0.44
PSEN1-204ENST00000394164 RTF1Q92541 710 aaKnown RBP12.27□□□□□ -0.44
PSEN1-204ENST00000394164 SETD1AO15047 1707 aaKnown RBP12.27□□□□□ -0.45
PSEN1-204ENST00000394164 KCNA6P17658 529 aa12.27□□□□□ -0.45
PSEN1-204ENST00000394164 OTUD7AQ8TE49 926 aaPredicted RBP12.27□□□□□ -0.45
PSEN1-204ENST00000394164 PTPRUQ92729 1446 aa12.27□□□□□ -0.45
PSEN1-204ENST00000394164 CD2BP2O95400 341 aaKnown RBP12.27□□□□□ -0.45
PSEN1-204ENST00000394164 G2E3Q7L622 706 aa12.27□□□□□ -0.45
PSEN1-204ENST00000394164 TSPYL4Q9UJ04 414 aa12.27□□□□□ -0.45
PSEN1-204ENST00000394164 RBM42Q9BTD8 480 aaKnown RBP12.26□□□□□ -0.45
PSEN1-204ENST00000394164 ISY1Q9ULR0 285 aaKnown RBP12.26□□□□□ -0.45
PSEN1-204ENST00000394164 CDK12Q9NYV4 1490 aaPredicted RBP12.26□□□□□ -0.45
PSEN1-204ENST00000394164 CAVIN1Q6NZI2 390 aaKnown RBP12.26□□□□□ -0.45
PSEN1-204ENST00000394164 LMOD2Q6P5Q4 547 aa12.26□□□□□ -0.45
PSEN1-204ENST00000394164 CDC42BPGQ6DT37 1551 aa12.25□□□□□ -0.45
PSEN1-204ENST00000394164 AATKQ6ZMQ8 1374 aa12.25□□□□□ -0.45
PSEN1-204ENST00000394164 ABTB2Q8N961 1025 aa12.25□□□□□ -0.45
PSEN1-204ENST00000394164 PPP1R9BQ96SB3 815 aa12.25□□□□□ -0.45
PSEN1-204ENST00000394164 MEIS3Q99687 375 aa12.25□□□□□ -0.45
PSEN1-204ENST00000394164 FAM177BA6PVY3 158 aa12.25□□□□□ -0.45
PSEN1-204ENST00000394164 EYA1Q99502 592 aa12.25□□□□□ -0.45
PSEN1-204ENST00000394164 API5Q9BZZ5 524 aaKnown RBP12.25□□□□□ -0.45
PSEN1-204ENST00000394164 KIF13AQ9H1H9 1805 aa12.25□□□□□ -0.45
PSEN1-204ENST00000394164 ZNF428Q96B54 188 aa12.24□□□□□ -0.45
PSEN1-204ENST00000394164 MCTP1Q6DN14 999 aa12.24□□□□□ -0.45
PSEN1-204ENST00000394164 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.24□□□□□ -0.45
PSEN1-204ENST00000394164 PLEKHG3A1L390 1219 aa12.24□□□□□ -0.45
PSEN1-204ENST00000394164 RAB3GAP1Q15042 981 aa12.24□□□□□ -0.45
PSEN1-204ENST00000394164 SKOR2Q2VWA4 1001 aaPredicted RBP12.24□□□□□ -0.45
PSEN1-204ENST00000394164 USP6P35125 1406 aa12.23□□□□□ -0.45
PSEN1-204ENST00000394164 DLG5Q8TDM6 1919 aa12.23□□□□□ -0.45
PSEN1-204ENST00000394164 ABCC4O15439 1325 aa12.23□□□□□ -0.45
PSEN1-204ENST00000394164 CBX1P83916 185 aa12.23□□□□□ -0.45
PSEN1-204ENST00000394164 TSHZ3Q63HK5 1081 aa12.23□□□□□ -0.45
PSEN1-204ENST00000394164 SETD1BQ9UPS6 1966 aaKnown RBP12.23□□□□□ -0.45
PSEN1-204ENST00000394164 CHL1O00533 1208 aa12.23□□□□□ -0.45
PSEN1-204ENST00000394164 TBC1D9Q6ZT07 1266 aa12.23□□□□□ -0.45
PSEN1-204ENST00000394164 SMAP1Q8IYB5 467 aaPredicted RBP12.23□□□□□ -0.45
PSEN1-204ENST00000394164 MAP7D2Q96T17 732 aa12.23□□□□□ -0.45
PSEN1-204ENST00000394164 ARHGAP45Q92619 1136 aa12.22□□□□□ -0.45
PSEN1-204ENST00000394164 RBSNQ9H1K0 784 aa12.22□□□□□ -0.45
PSEN1-204ENST00000394164 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.22□□□□□ -0.45
PSEN1-204ENST00000394164 RBM27Q9P2N5 1060 aaKnown RBP12.22□□□□□ -0.45
PSEN1-204ENST00000394164 REREQ9P2R6 1566 aa12.22□□□□□ -0.45
PSEN1-204ENST00000394164 DNTTIP2Q5QJE6 756 aaKnown RBP12.22□□□□□ -0.45
PSEN1-204ENST00000394164 CHAMP1Q96JM3 812 aa12.22□□□□□ -0.45
PSEN1-204ENST00000394164 GOLGA6L22H0YM25 854 aa12.21□□□□□ -0.45
PSEN1-204ENST00000394164 DDIT3P35638 169 aa12.21□□□□□ -0.45
PSEN1-204ENST00000394164 THEMISQ8N1K5 641 aaPredicted RBP12.21□□□□□ -0.45
PSEN1-204ENST00000394164 BBXQ8WY36 941 aaPredicted RBP12.21□□□□□ -0.45
PSEN1-204ENST00000394164 GCC1Q96CN9 775 aa12.21□□□□□ -0.45
PSEN1-204ENST00000394164 SIRT1Q96EB6 747 aa12.21□□□□□ -0.45
PSEN1-204ENST00000394164 RNF214Q8ND24 703 aa12.21□□□□□ -0.45
PSEN1-204ENST00000394164 PLEKHG1Q9ULL1 1385 aa12.21□□□□□ -0.45
PSEN1-204ENST00000394164 IGSF3O75054 1194 aa12.21□□□□□ -0.46
PSEN1-204ENST00000394164 GAS2L2Q8NHY3 880 aa12.21□□□□□ -0.46
PSEN1-204ENST00000394164 MSH6P52701 1360 aa12.21□□□□□ -0.46
PSEN1-204ENST00000394164 UBR1Q8IWV7 1749 aa12.2□□□□□ -0.46
PSEN1-204ENST00000394164 PDE4CQ08493 712 aa12.2□□□□□ -0.46
PSEN1-204ENST00000394164 FOXD4L5Q5VV16 416 aaPredicted RBP12.2□□□□□ -0.46
PSEN1-204ENST00000394164 FOXD4L4Q8WXT5 416 aaPredicted RBP12.2□□□□□ -0.46
PSEN1-204ENST00000394164 TECPR2O15040 1411 aa12.2□□□□□ -0.46
PSEN1-204ENST00000394164 RIMS1Q86UR5 1692 aaKnown RBP12.2□□□□□ -0.46
PSEN1-204ENST00000394164 GSPT1P15170 499 aaKnown RBP12.19□□□□□ -0.46
PSEN1-204ENST00000394164 EIF2S2P20042 333 aaKnown RBP12.19□□□□□ -0.46
PSEN1-204ENST00000394164 FKBP5Q13451 457 aaPredicted RBP12.19□□□□□ -0.46
PSEN1-204ENST00000394164 ITSN1Q15811 1721 aa12.19□□□□□ -0.46
PSEN1-204ENST00000394164 AK9Q5TCS8 1911 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms