RNA–Protein interactions for RNA: ENST00000394055.7

CDH16-202, Transcript of cadherin 16, humanhuman

TSL 1 (best) BASIC

Gene CDH16, Length 2,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16-202ENST00000394055 FMN2Q9NZ56 1722 aa18.49■□□□□ 0.55
CDH16-202ENST00000394055 MFAP1P55081 439 aaKnown RBP18.49■□□□□ 0.55
CDH16-202ENST00000394055 ANKRD45Q5TZF3 282 aa18.49■□□□□ 0.55
CDH16-202ENST00000394055 CHD1LQ86WJ1 897 aa18.49■□□□□ 0.55
CDH16-202ENST00000394055 TBC1D32Q96NH3 1257 aa18.49■□□□□ 0.55
CDH16-202ENST00000394055 SIRT2Q8IXJ6 389 aa18.48■□□□□ 0.55
CDH16-202ENST00000394055 RTF1Q92541 710 aaKnown RBP18.48■□□□□ 0.55
CDH16-202ENST00000394055 NFKBIBQ15653 356 aa18.47■□□□□ 0.55
CDH16-202ENST00000394055 ANKARQ7Z5J8 1434 aa18.47■□□□□ 0.55
CDH16-202ENST00000394055 ANKLE2Q86XL3 938 aa18.46■□□□□ 0.55
CDH16-202ENST00000394055 CHMP4BQ9H444 224 aaKnown RBP18.46■□□□□ 0.55
CDH16-202ENST00000394055 CRB1P82279 1406 aa18.46■□□□□ 0.55
CDH16-202ENST00000394055 IGSF1Q8N6C5 1336 aa18.46■□□□□ 0.55
CDH16-202ENST00000394055 TSPYL4Q9UJ04 414 aa18.45■□□□□ 0.54
CDH16-202ENST00000394055 HOXC9P31274 260 aa18.45■□□□□ 0.54
CDH16-202ENST00000394055 PLEKHG5O94827 1062 aa18.45■□□□□ 0.54
CDH16-202ENST00000394055 USP35Q9P2H5 1018 aa18.44■□□□□ 0.54
CDH16-202ENST00000394055 KDRP35968 1356 aa18.44■□□□□ 0.54
CDH16-202ENST00000394055 BECN1Q14457 450 aa18.44■□□□□ 0.54
CDH16-202ENST00000394055 PHF8Q9UPP1 1060 aa18.44■□□□□ 0.54
CDH16-202ENST00000394055 ZBTB7CA1YPR0 619 aa18.43■□□□□ 0.54
CDH16-202ENST00000394055 USHBP1Q8N6Y0 703 aa18.43■□□□□ 0.54
CDH16-202ENST00000394055 GCC1Q96CN9 775 aa18.43■□□□□ 0.54
CDH16-202ENST00000394055 SLKQ9H2G2 1235 aaPredicted RBP18.43■□□□□ 0.54
CDH16-202ENST00000394055 KIAA0232Q92628 1395 aa18.43■□□□□ 0.54
CDH16-202ENST00000394055 SLC4A2P04920 1241 aa18.42■□□□□ 0.54
CDH16-202ENST00000394055 GAS2L2Q8NHY3 880 aa18.42■□□□□ 0.54
CDH16-202ENST00000394055 RGS12O14924 1447 aa18.41■□□□□ 0.54
CDH16-202ENST00000394055 HAP1P54257 671 aaPredicted RBP18.41■□□□□ 0.54
CDH16-202ENST00000394055 C22orf23Q9BZE7 217 aa18.41■□□□□ 0.54
CDH16-202ENST00000394055 INTS3Q68E01 1043 aaKnown RBP18.41■□□□□ 0.54
CDH16-202ENST00000394055 ESCO1Q5FWF5 840 aa18.4■□□□□ 0.54
CDH16-202ENST00000394055 MARF1Q9Y4F3 1742 aaKnown RBP18.4■□□□□ 0.54
CDH16-202ENST00000394055 MSH6P52701 1360 aa18.4■□□□□ 0.54
CDH16-202ENST00000394055 G2E3Q7L622 706 aa18.4■□□□□ 0.54
CDH16-202ENST00000394055 TBC1D2Q9BYX2 928 aa18.4■□□□□ 0.54
CDH16-202ENST00000394055 NECTIN2Q92692 538 aa18.39■□□□□ 0.53
CDH16-202ENST00000394055 F6X3S4 739 aa18.38■□□□□ 0.53
CDH16-202ENST00000394055 FRAT2O75474 233 aaPredicted RBP18.38■□□□□ 0.53
CDH16-202ENST00000394055 SLC4A10Q6U841 1118 aa18.38■□□□□ 0.53
CDH16-202ENST00000394055 SPRYD3Q8NCJ5 442 aa18.38■□□□□ 0.53
CDH16-202ENST00000394055 MEIS3Q99687 375 aa18.38■□□□□ 0.53
CDH16-202ENST00000394055 CHD2O14647 1828 aaKnown RBP18.37■□□□□ 0.53
CDH16-202ENST00000394055 GNAT3A8MTJ3 354 aa18.37■□□□□ 0.53
CDH16-202ENST00000394055 XPCQ01831 940 aaPredicted RBP18.37■□□□□ 0.53
CDH16-202ENST00000394055 PSME1Q06323 249 aa18.37■□□□□ 0.53
CDH16-202ENST00000394055 PTPRCP08575 1304 aa18.36■□□□□ 0.53
CDH16-202ENST00000394055 APBB1O00213 710 aa18.36■□□□□ 0.53
CDH16-202ENST00000394055 BMP2KLQ5H9B9 411 aa18.36■□□□□ 0.53
CDH16-202ENST00000394055 NWD1Q149M9 1564 aa18.35■□□□□ 0.53
CDH16-202ENST00000394055 KIF24Q5T7B8 1368 aa18.35■□□□□ 0.53
CDH16-202ENST00000394055 IL17REQ8NFR9 667 aa18.35■□□□□ 0.53
CDH16-202ENST00000394055 SETD1BQ9UPS6 1966 aaKnown RBP18.34■□□□□ 0.53
CDH16-202ENST00000394055 ATP10DQ9P241 1426 aa18.34■□□□□ 0.53
CDH16-202ENST00000394055 CEP85Q6P2H3 762 aa18.33■□□□□ 0.53
CDH16-202ENST00000394055 ANKRD44Q8N8A2 993 aa18.33■□□□□ 0.53
CDH16-202ENST00000394055 ORAI2Q96SN7 254 aa18.33■□□□□ 0.53
CDH16-202ENST00000394055 C16orf71Q8IYS4 520 aaPredicted RBP18.33■□□□□ 0.52
CDH16-202ENST00000394055 DCTPP1Q9H773 170 aa18.33■□□□□ 0.52
CDH16-202ENST00000394055 RTL1A6NKG5 1358 aa18.33■□□□□ 0.52
CDH16-202ENST00000394055 MAP3K5Q99683 1374 aa18.33■□□□□ 0.52
CDH16-202ENST00000394055 LMOD2Q6P5Q4 547 aa18.32■□□□□ 0.52
CDH16-202ENST00000394055 ADGRL3Q9HAR2 1447 aa18.32■□□□□ 0.52
CDH16-202ENST00000394055 STK31Q9BXU1 1019 aa18.32■□□□□ 0.52
CDH16-202ENST00000394055 HTATSF1O43719 755 aaKnown RBP18.31■□□□□ 0.52
CDH16-202ENST00000394055 NBPF6Q5VWK0 638 aa18.31■□□□□ 0.52
CDH16-202ENST00000394055 NBPF4Q96M43 638 aa18.31■□□□□ 0.52
CDH16-202ENST00000394055 LTN1O94822 1766 aa18.31■□□□□ 0.52
CDH16-202ENST00000394055 SMARCA5O60264 1052 aaPredicted RBP18.31■□□□□ 0.52
CDH16-202ENST00000394055 OTUD7AQ8TE49 926 aaPredicted RBP18.31■□□□□ 0.52
CDH16-202ENST00000394055 IP6K1Q92551 441 aa18.31■□□□□ 0.52
CDH16-202ENST00000394055 ZNF142P52746 1687 aaPredicted RBP18.3■□□□□ 0.52
CDH16-202ENST00000394055 TBC1D9Q6ZT07 1266 aa18.3■□□□□ 0.52
CDH16-202ENST00000394055 LRRC59Q96AG4 307 aaKnown RBP18.3■□□□□ 0.52
CDH16-202ENST00000394055 RPAP2Q8IXW5 612 aaPredicted RBP18.3■□□□□ 0.52
CDH16-202ENST00000394055 NPHP4O75161 1426 aaPredicted RBP18.29■□□□□ 0.52
CDH16-202ENST00000394055 FKBP5Q13451 457 aaPredicted RBP18.29■□□□□ 0.52
CDH16-202ENST00000394055 PLEKHM2Q8IWE5 1019 aa18.29■□□□□ 0.52
CDH16-202ENST00000394055 ANTXR1Q9H6X2 564 aa18.29■□□□□ 0.52
CDH16-202ENST00000394055 GSPT1P15170 499 aaKnown RBP18.29■□□□□ 0.52
CDH16-202ENST00000394055 USP54Q70EL1 1684 aa18.28■□□□□ 0.52
CDH16-202ENST00000394055 TAF7Q15545 349 aaPredicted RBP18.28■□□□□ 0.52
CDH16-202ENST00000394055 FLIIQ13045 1269 aa18.28■□□□□ 0.52
CDH16-202ENST00000394055 LRRC37A3O60309 1634 aa18.28■□□□□ 0.52
CDH16-202ENST00000394055 CCDC30Q5VVM6 783 aa18.27■□□□□ 0.52
CDH16-202ENST00000394055 NFAT5O94916 1531 aa18.27■□□□□ 0.52
CDH16-202ENST00000394055 ADAMTSL3P82987 1691 aa18.27■□□□□ 0.52
CDH16-202ENST00000394055 CCT4P50991 539 aaKnown RBP18.27■□□□□ 0.51
CDH16-202ENST00000394055 RBM25P49756 843 aaKnown RBP18.26■□□□□ 0.51
CDH16-202ENST00000394055 LGR6Q9HBX8 967 aa18.26■□□□□ 0.51
CDH16-202ENST00000394055 KCNH5Q8NCM2 988 aa18.25■□□□□ 0.51
CDH16-202ENST00000394055 GSE1Q14687 1217 aa18.25■□□□□ 0.51
CDH16-202ENST00000394055 HSCBQ8IWL3 235 aa18.25■□□□□ 0.51
CDH16-202ENST00000394055 CDC45O75419 566 aa18.24■□□□□ 0.51
CDH16-202ENST00000394055 GCP02774 474 aa18.24■□□□□ 0.51
CDH16-202ENST00000394055 TTC22Q5TAA0 569 aa18.23■□□□□ 0.51
CDH16-202ENST00000394055 HDGFL1Q5TGJ6 251 aa18.23■□□□□ 0.51
CDH16-202ENST00000394055 PROSER2Q86WR7 435 aaPredicted RBP18.23■□□□□ 0.51
CDH16-202ENST00000394055 PODXL2Q9NZ53 605 aa18.23■□□□□ 0.51
CDH16-202ENST00000394055 EIF2S2P20042 333 aaKnown RBP18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms