RNA–Protein interactions for RNA: ENST00000392686.6

KCNMB3-204, Transcript of potassium calcium-activated channel subfamily M regulatory beta subunit 3, humanhuman

TSL 1 (best)

Gene KCNMB3, Length 2,055 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMB3-204ENST00000392686 MCTP1Q6DN14 999 aa16.23■□□□□ 0.19
KCNMB3-204ENST00000392686 RPAP2Q8IXW5 612 aaPredicted RBP16.22■□□□□ 0.19
KCNMB3-204ENST00000392686 ZSCAN23Q3MJ62 389 aa16.22■□□□□ 0.19
KCNMB3-204ENST00000392686 OFD1O75665 1012 aa16.21■□□□□ 0.19
KCNMB3-204ENST00000392686 CASC1Q6TDU7 716 aa16.21■□□□□ 0.19
KCNMB3-204ENST00000392686 ST18O60284 1047 aa16.2■□□□□ 0.18
KCNMB3-204ENST00000392686 TERF1P54274 439 aa16.2■□□□□ 0.18
KCNMB3-204ENST00000392686 SENP3Q9H4L4 574 aaPredicted RBP16.2■□□□□ 0.18
KCNMB3-204ENST00000392686 C3P01024 1663 aa16.2■□□□□ 0.18
KCNMB3-204ENST00000392686 HAP1P54257 671 aaPredicted RBP16.2■□□□□ 0.18
KCNMB3-204ENST00000392686 CAVIN1Q6NZI2 390 aaKnown RBP16.2■□□□□ 0.18
KCNMB3-204ENST00000392686 CEP85Q6P2H3 762 aa16.2■□□□□ 0.18
KCNMB3-204ENST00000392686 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.2■□□□□ 0.18
KCNMB3-204ENST00000392686 PDLIM2Q96JY6 352 aa16.2■□□□□ 0.18
KCNMB3-204ENST00000392686 SDSP20132 328 aa16.19■□□□□ 0.18
KCNMB3-204ENST00000392686 MSNP26038 577 aaKnown RBP16.19■□□□□ 0.18
KCNMB3-204ENST00000392686 KIAA1211Q6ZU35 1233 aa16.19■□□□□ 0.18
KCNMB3-204ENST00000392686 C16orf71Q8IYS4 520 aaPredicted RBP16.19■□□□□ 0.18
KCNMB3-204ENST00000392686 AKAP12Q02952 1782 aa16.19■□□□□ 0.18
KCNMB3-204ENST00000392686 RTL1A6NKG5 1358 aa16.19■□□□□ 0.18
KCNMB3-204ENST00000392686 MSH6P52701 1360 aa16.18■□□□□ 0.18
KCNMB3-204ENST00000392686 KIAA0232Q92628 1395 aa16.18■□□□□ 0.18
KCNMB3-204ENST00000392686 PKP1Q13835 747 aa16.18■□□□□ 0.18
KCNMB3-204ENST00000392686 FAM83GA6ND36 823 aa16.17■□□□□ 0.18
KCNMB3-204ENST00000392686 REC8O95072 547 aa16.17■□□□□ 0.18
KCNMB3-204ENST00000392686 NME9Q86XW9 330 aa16.17■□□□□ 0.18
KCNMB3-204ENST00000392686 OTUD7AQ8TE49 926 aaPredicted RBP16.17■□□□□ 0.18
KCNMB3-204ENST00000392686 CPS1P31327 1500 aa16.17■□□□□ 0.18
KCNMB3-204ENST00000392686 PTPRCP08575 1304 aa16.17■□□□□ 0.18
KCNMB3-204ENST00000392686 ITSN1Q15811 1721 aa16.17■□□□□ 0.18
KCNMB3-204ENST00000392686 RBSNQ9H1K0 784 aa16.17■□□□□ 0.18
KCNMB3-204ENST00000392686 NOL7Q9UMY1 257 aaKnown RBP16.16■□□□□ 0.18
KCNMB3-204ENST00000392686 ZDHHC9Q9Y397 364 aa16.16■□□□□ 0.18
KCNMB3-204ENST00000392686 TUBGCP6Q96RT7 1819 aa16.16■□□□□ 0.18
KCNMB3-204ENST00000392686 ZNF500O60304 480 aaPredicted RBP16.15■□□□□ 0.18
KCNMB3-204ENST00000392686 WAPLQ7Z5K2 1190 aa16.15■□□□□ 0.18
KCNMB3-204ENST00000392686 ZGPATQ8N5A5 531 aaKnown RBP16.15■□□□□ 0.18
KCNMB3-204ENST00000392686 GPT2Q8TD30 523 aa16.15■□□□□ 0.18
KCNMB3-204ENST00000392686 A2ML1A8K2U0 1454 aa16.15■□□□□ 0.18
KCNMB3-204ENST00000392686 NCLP19338 710 aaKnown RBP16.15■□□□□ 0.18
KCNMB3-204ENST00000392686 ERC2O15083 957 aa16.14■□□□□ 0.17
KCNMB3-204ENST00000392686 COG3Q96JB2 828 aa16.14■□□□□ 0.17
KCNMB3-204ENST00000392686 OSBPL3Q9H4L5 887 aa16.14■□□□□ 0.17
KCNMB3-204ENST00000392686 NRXN3Q9Y4C0 1643 aa16.14■□□□□ 0.17
KCNMB3-204ENST00000392686 WASLO00401 505 aaPredicted RBP16.14■□□□□ 0.17
KCNMB3-204ENST00000392686 PRIM1P49642 420 aaKnown RBP16.14■□□□□ 0.17
KCNMB3-204ENST00000392686 DCTN1Q14203 1278 aa16.14■□□□□ 0.17
KCNMB3-204ENST00000392686 PDCL3Q9H2J4 239 aa16.14■□□□□ 0.17
KCNMB3-204ENST00000392686 CHL1O00533 1208 aa16.13■□□□□ 0.17
KCNMB3-204ENST00000392686 PRPF40AO75400 957 aaKnown RBP16.13■□□□□ 0.17
KCNMB3-204ENST00000392686 LRSAM1Q6UWE0 723 aa16.13■□□□□ 0.17
KCNMB3-204ENST00000392686 ZRANB1Q9UGI0 708 aa16.13■□□□□ 0.17
KCNMB3-204ENST00000392686 SMARCA5O60264 1052 aaPredicted RBP16.12■□□□□ 0.17
KCNMB3-204ENST00000392686 FGD1P98174 961 aa16.12■□□□□ 0.17
KCNMB3-204ENST00000392686 RBM10P98175 930 aaKnown RBP16.12■□□□□ 0.17
KCNMB3-204ENST00000392686 FBXO31Q5XUX0 539 aaPredicted RBP16.12■□□□□ 0.17
KCNMB3-204ENST00000392686 SPATA31D1Q6ZQQ2 1576 aa16.12■□□□□ 0.17
KCNMB3-204ENST00000392686 RGPD1P0DJD0 1748 aa16.12■□□□□ 0.17
KCNMB3-204ENST00000392686 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.12■□□□□ 0.17
KCNMB3-204ENST00000392686 MBD3O95983 291 aa16.11■□□□□ 0.17
KCNMB3-204ENST00000392686 MCM5P33992 734 aa16.11■□□□□ 0.17
KCNMB3-204ENST00000392686 RRS1Q15050 365 aaKnown RBP16.11■□□□□ 0.17
KCNMB3-204ENST00000392686 MEIS3Q99687 375 aa16.11■□□□□ 0.17
KCNMB3-204ENST00000392686 RBM27Q9P2N5 1060 aaKnown RBP16.11■□□□□ 0.17
KCNMB3-204ENST00000392686 HMMRO75330 724 aa16.1■□□□□ 0.17
KCNMB3-204ENST00000392686 MCM2P49736 904 aa16.1■□□□□ 0.17
KCNMB3-204ENST00000392686 TMEM63CQ9P1W3 806 aa16.1■□□□□ 0.17
KCNMB3-204ENST00000392686 STAG3Q9UJ98 1225 aa16.1■□□□□ 0.17
KCNMB3-204ENST00000392686 ZKSCAN5Q9Y2L8 839 aa16.1■□□□□ 0.17
KCNMB3-204ENST00000392686 CRB1P82279 1406 aa16.09■□□□□ 0.17
KCNMB3-204ENST00000392686 CUL4AQ13619 759 aa16.09■□□□□ 0.17
KCNMB3-204ENST00000392686 KRT24Q2M2I5 525 aa16.09■□□□□ 0.17
KCNMB3-204ENST00000392686 NALCNQ8IZF0 1738 aa16.08■□□□□ 0.17
KCNMB3-204ENST00000392686 TECPR2O15040 1411 aa16.08■□□□□ 0.16
KCNMB3-204ENST00000392686 BRD1O95696 1058 aa16.08■□□□□ 0.16
KCNMB3-204ENST00000392686 PDE1AP54750 535 aa16.08■□□□□ 0.16
KCNMB3-204ENST00000392686 SALL3Q9BXA9 1300 aa16.08■□□□□ 0.16
KCNMB3-204ENST00000392686 SSH2Q76I76 1423 aa16.08■□□□□ 0.16
KCNMB3-204ENST00000392686 EIF4A2Q14240 407 aaKnown RBP16.07■□□□□ 0.16
KCNMB3-204ENST00000392686 NUDT16Q96DE0 195 aaKnown RBP16.07■□□□□ 0.16
KCNMB3-204ENST00000392686 TMX3Q96JJ7 454 aa16.07■□□□□ 0.16
KCNMB3-204ENST00000392686 CSPP1Q1MSJ5 1256 aa16.07■□□□□ 0.16
KCNMB3-204ENST00000392686 AEBP1Q8IUX7 1158 aa16.07■□□□□ 0.16
KCNMB3-204ENST00000392686 IL17RAQ96F46 866 aa16.07■□□□□ 0.16
KCNMB3-204ENST00000392686 CCDC39Q9UFE4 941 aa16.07■□□□□ 0.16
KCNMB3-204ENST00000392686 AGLP35573 1532 aa16.06■□□□□ 0.16
KCNMB3-204ENST00000392686 SYCE3A1L190 88 aa16.06■□□□□ 0.16
KCNMB3-204ENST00000392686 APBB1O00213 710 aa16.06■□□□□ 0.16
KCNMB3-204ENST00000392686 INTS4Q96HW7 963 aaKnown RBP16.06■□□□□ 0.16
KCNMB3-204ENST00000392686 NSFL1CQ9UNZ2 370 aaKnown RBP16.06■□□□□ 0.16
KCNMB3-204ENST00000392686 CCDC61Q9Y6R9 512 aa16.06■□□□□ 0.16
KCNMB3-204ENST00000392686 PEAK1Q9H792 1746 aa16.06■□□□□ 0.16
KCNMB3-204ENST00000392686 ARHGEF10O15013 1369 aa16.06■□□□□ 0.16
KCNMB3-204ENST00000392686 CCT4P50991 539 aaKnown RBP16.06■□□□□ 0.16
KCNMB3-204ENST00000392686 ANAPC15P60006 121 aa16.06■□□□□ 0.16
KCNMB3-204ENST00000392686 SULT6B1Q6IMI4 303 aa16.06■□□□□ 0.16
KCNMB3-204ENST00000392686 SIRT1Q96EB6 747 aa16.06■□□□□ 0.16
KCNMB3-204ENST00000392686 OVOS2A0A0J9YW53 1432 aa16.05■□□□□ 0.16
KCNMB3-204ENST00000392686 OVOS2Q6IE36 1432 aa16.05■□□□□ 0.16
KCNMB3-204ENST00000392686 N4BP2Q86UW6 1770 aaPredicted RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms