RNA–Protein interactions for RNA: ENST00000391945.8

ERCC2-204, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC2, Length 4,153 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-204ENST00000391945 ALKQ9UM73 1620 aa15.8■□□□□ 0.12
ERCC2-204ENST00000391945 ADAMTS2O95450 1211 aa15.8■□□□□ 0.12
ERCC2-204ENST00000391945 CHD1LQ86WJ1 897 aa15.8■□□□□ 0.12
ERCC2-204ENST00000391945 ANP32BQ92688 251 aaKnown RBP15.8■□□□□ 0.12
ERCC2-204ENST00000391945 GCC1Q96CN9 775 aa15.8■□□□□ 0.12
ERCC2-204ENST00000391945 NLRP1Q9C000 1473 aa15.79■□□□□ 0.12
ERCC2-204ENST00000391945 EXOC6BQ9Y2D4 811 aa15.79■□□□□ 0.12
ERCC2-204ENST00000391945 RNF123Q5XPI4 1314 aa15.79■□□□□ 0.12
ERCC2-204ENST00000391945 C22orf23Q9BZE7 217 aa15.79■□□□□ 0.12
ERCC2-204ENST00000391945 FLIIQ13045 1269 aa15.78■□□□□ 0.12
ERCC2-204ENST00000391945 CLTCQ00610 1675 aaKnown RBP15.78■□□□□ 0.12
ERCC2-204ENST00000391945 G3BP1Q13283 466 aaKnown RBP eCLIP15.78■□□□□ 0.12
ERCC2-204ENST00000391945 IFIT2P09913 472 aaKnown RBP15.78■□□□□ 0.12
ERCC2-204ENST00000391945 GTF2E1P29083 439 aaPredicted RBP15.77■□□□□ 0.12
ERCC2-204ENST00000391945 IP6K1Q92551 441 aa15.77■□□□□ 0.12
ERCC2-204ENST00000391945 DNAJC5Q9H3Z4 198 aa15.77■□□□□ 0.12
ERCC2-204ENST00000391945 AEBP2Q6ZN18 517 aaPredicted RBP15.76■□□□□ 0.11
ERCC2-204ENST00000391945 MRPL50Q8N5N7 158 aaKnown RBP15.76■□□□□ 0.11
ERCC2-204ENST00000391945 PLEKHF1Q96S99 279 aa15.76■□□□□ 0.11
ERCC2-204ENST00000391945 SMARCA5O60264 1052 aaPredicted RBP15.76■□□□□ 0.11
ERCC2-204ENST00000391945 SLC39A6Q13433 755 aa15.76■□□□□ 0.11
ERCC2-204ENST00000391945 IL1RAPL2Q9NP60 686 aa15.76■□□□□ 0.11
ERCC2-204ENST00000391945 ZNF521Q96K83 1311 aa15.76■□□□□ 0.11
ERCC2-204ENST00000391945 SRGAP3O43295 1099 aa15.76■□□□□ 0.11
ERCC2-204ENST00000391945 ANO2Q9NQ90 1003 aa15.76■□□□□ 0.11
ERCC2-204ENST00000391945 NEXMIFQ5QGS0 1516 aa15.75■□□□□ 0.11
ERCC2-204ENST00000391945 SBNO1A3KN83 1393 aa15.75■□□□□ 0.11
ERCC2-204ENST00000391945 NFKBIBQ15653 356 aa15.75■□□□□ 0.11
ERCC2-204ENST00000391945 KAT6BQ8WYB5 2073 aa15.75■□□□□ 0.11
ERCC2-204ENST00000391945 FAM177BA6PVY3 158 aa15.75■□□□□ 0.11
ERCC2-204ENST00000391945 INSRP06213 1382 aa15.75■□□□□ 0.11
ERCC2-204ENST00000391945 NBPF6Q5VWK0 638 aa15.75■□□□□ 0.11
ERCC2-204ENST00000391945 NBPF4Q96M43 638 aa15.75■□□□□ 0.11
ERCC2-204ENST00000391945 SIL1Q9H173 461 aa15.75■□□□□ 0.11
ERCC2-204ENST00000391945 VWDEQ8N2E2 1590 aa15.75■□□□□ 0.11
ERCC2-204ENST00000391945 FAM135BQ49AJ0 1406 aa15.74■□□□□ 0.11
ERCC2-204ENST00000391945 RPAP2Q8IXW5 612 aaPredicted RBP15.74■□□□□ 0.11
ERCC2-204ENST00000391945 MEIS3Q99687 375 aa15.74■□□□□ 0.11
ERCC2-204ENST00000391945 MEX3CQ5U5Q3 659 aaKnown RBP15.73■□□□□ 0.11
ERCC2-204ENST00000391945 DIAPH3Q9NSV4 1193 aa15.72■□□□□ 0.11
ERCC2-204ENST00000391945 PI4KAP2A4QPH2 592 aa15.72■□□□□ 0.11
ERCC2-204ENST00000391945 CDC45O75419 566 aa15.72■□□□□ 0.11
ERCC2-204ENST00000391945 PI4KAP1Q8N8J0 262 aa15.72■□□□□ 0.11
ERCC2-204ENST00000391945 TULP4Q9NRJ4 1543 aa15.72■□□□□ 0.11
ERCC2-204ENST00000391945 ATP7BP35670 1465 aa15.72■□□□□ 0.11
ERCC2-204ENST00000391945 PIK3C2BO00750 1634 aa15.72■□□□□ 0.11
ERCC2-204ENST00000391945 MROH1Q8NDA8 1641 aa15.72■□□□□ 0.11
ERCC2-204ENST00000391945 IFNL2Q8IZJ0 200 aa15.72■□□□□ 0.11
ERCC2-204ENST00000391945 CLASRPQ8N2M8 674 aaKnown RBP15.72■□□□□ 0.11
ERCC2-204ENST00000391945 USP6P35125 1406 aa15.71■□□□□ 0.11
ERCC2-204ENST00000391945 FOXD4L5Q5VV16 416 aaPredicted RBP15.71■□□□□ 0.11
ERCC2-204ENST00000391945 INTS3Q68E01 1043 aaKnown RBP15.71■□□□□ 0.11
ERCC2-204ENST00000391945 FOXD4L4Q8WXT5 416 aaPredicted RBP15.71■□□□□ 0.11
ERCC2-204ENST00000391945 LGR6Q9HBX8 967 aa15.71■□□□□ 0.11
ERCC2-204ENST00000391945 LRRFIP2Q9Y608 721 aaKnown RBP15.71■□□□□ 0.11
ERCC2-204ENST00000391945 DEPDC5O75140 1603 aa15.71■□□□□ 0.11
ERCC2-204ENST00000391945 AGLP35573 1532 aa15.71■□□□□ 0.11
ERCC2-204ENST00000391945 REC8O95072 547 aa15.71■□□□□ 0.11
ERCC2-204ENST00000391945 PIP4K2AP48426 406 aaPredicted RBP15.71■□□□□ 0.11
ERCC2-204ENST00000391945 HSP90AB4PQ58FF6 505 aa15.71■□□□□ 0.11
ERCC2-204ENST00000391945 NEUROD6Q96NK8 337 aa15.71■□□□□ 0.11
ERCC2-204ENST00000391945 LRRCC1Q9C099 1032 aa15.71■□□□□ 0.1
ERCC2-204ENST00000391945 CHPF2Q9P2E5 772 aa15.71■□□□□ 0.1
ERCC2-204ENST00000391945 SETBP1Q9Y6X0 1596 aa15.71■□□□□ 0.1
ERCC2-204ENST00000391945 TRMT2AQ8IZ69 625 aaKnown RBP15.7■□□□□ 0.1
ERCC2-204ENST00000391945 QRICH2Q9H0J4 1663 aa15.7■□□□□ 0.1
ERCC2-204ENST00000391945 MAP4K4O95819 1239 aaPredicted RBP15.7■□□□□ 0.1
ERCC2-204ENST00000391945 G2E3Q7L622 706 aa15.7■□□□□ 0.1
ERCC2-204ENST00000391945 DBF4Q9UBU7 674 aaPredicted RBP15.7■□□□□ 0.1
ERCC2-204ENST00000391945 NPHP4O75161 1426 aaPredicted RBP15.7■□□□□ 0.1
ERCC2-204ENST00000391945 ARHGAP45Q92619 1136 aa15.7■□□□□ 0.1
ERCC2-204ENST00000391945 FRAT2O75474 233 aaPredicted RBP15.69■□□□□ 0.1
ERCC2-204ENST00000391945 AKAP4Q5JQC9 854 aa15.69■□□□□ 0.1
ERCC2-204ENST00000391945 DNAAF4Q8WXU2 420 aa15.69■□□□□ 0.1
ERCC2-204ENST00000391945 TMEM94Q12767 1356 aa15.69■□□□□ 0.1
ERCC2-204ENST00000391945 PTPRCP08575 1304 aa15.69■□□□□ 0.1
ERCC2-204ENST00000391945 PTPRMP28827 1452 aa15.69■□□□□ 0.1
ERCC2-204ENST00000391945 ST18O60284 1047 aa15.69■□□□□ 0.1
ERCC2-204ENST00000391945 GSE1Q14687 1217 aa15.69■□□□□ 0.1
ERCC2-204ENST00000391945 NFATC2IPQ8NCF5 419 aa15.69■□□□□ 0.1
ERCC2-204ENST00000391945 CHL1O00533 1208 aa15.68■□□□□ 0.1
ERCC2-204ENST00000391945 CCDC85AQ96PX6 553 aaPredicted RBP15.68■□□□□ 0.1
ERCC2-204ENST00000391945 MAP3K5Q99683 1374 aa15.68■□□□□ 0.1
ERCC2-204ENST00000391945 LAMC1P11047 1609 aa15.67■□□□□ 0.1
ERCC2-204ENST00000391945 MROH2AA6NES4 1674 aa15.67■□□□□ 0.1
ERCC2-204ENST00000391945 JARID2Q92833 1246 aaPredicted RBP15.67■□□□□ 0.1
ERCC2-204ENST00000391945 ZBTB40Q9NUA8 1239 aa15.67■□□□□ 0.1
ERCC2-204ENST00000391945 NRXN1Q9ULB1 1477 aa15.67■□□□□ 0.1
ERCC2-204ENST00000391945 AATKQ6ZMQ8 1374 aa15.67■□□□□ 0.1
ERCC2-204ENST00000391945 NUTM1Q86Y26 1132 aa15.66■□□□□ 0.1
ERCC2-204ENST00000391945 ARHGEF40Q8TER5 1519 aa15.66■□□□□ 0.1
ERCC2-204ENST00000391945 ADGRB1O14514 1584 aa15.66■□□□□ 0.1
ERCC2-204ENST00000391945 TRIM44Q96DX7 344 aaPredicted RBP15.66■□□□□ 0.1
ERCC2-204ENST00000391945 MYD88Q99836 296 aa15.66■□□□□ 0.1
ERCC2-204ENST00000391945 TMOD3Q9NYL9 352 aa15.66■□□□□ 0.1
ERCC2-204ENST00000391945 HTATSF1O43719 755 aaKnown RBP15.66■□□□□ 0.1
ERCC2-204ENST00000391945 PHAXQ9H814 394 aaKnown RBP15.66■□□□□ 0.1
ERCC2-204ENST00000391945 SLAIN2Q9P270 581 aa15.66■□□□□ 0.1
ERCC2-204ENST00000391945 MAP3K2Q9Y2U5 619 aa15.66■□□□□ 0.1
ERCC2-204ENST00000391945 TSHZ3Q63HK5 1081 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms