RNA–Protein interactions for RNA: ENST00000381029.4

VCX3B-201, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-201ENST00000381029 SBF2Q86WG5 1849 aa20.04■□□□□ 0.8
VCX3B-201ENST00000381029 AEBP1Q8IUX7 1158 aa20.04■□□□□ 0.8
VCX3B-201ENST00000381029 ZCRB1Q8TBF4 217 aaKnown RBP20.04■□□□□ 0.8
VCX3B-201ENST00000381029 RAPGEF4Q8WZA2 1011 aa20.04■□□□□ 0.8
VCX3B-201ENST00000381029 TRIM37O94972 964 aa20.03■□□□□ 0.8
VCX3B-201ENST00000381029 PTF1AQ7RTS3 328 aa20.03■□□□□ 0.8
VCX3B-201ENST00000381029 TATP17735 454 aaPredicted RBP20.02■□□□□ 0.8
VCX3B-201ENST00000381029 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.02■□□□□ 0.8
VCX3B-201ENST00000381029 SRCAPQ6ZRS2 3230 aa20.01■□□□□ 0.79
VCX3B-201ENST00000381029 CYP27B1O15528 508 aa20.01■□□□□ 0.79
VCX3B-201ENST00000381029 DIAPH1O60610 1272 aaKnown RBP20.01■□□□□ 0.79
VCX3B-201ENST00000381029 DEFB132Q7Z7B7 95 aa20.01■□□□□ 0.79
VCX3B-201ENST00000381029 DDX54Q8TDD1 881 aaKnown RBP19.99■□□□□ 0.79
VCX3B-201ENST00000381029 BCL11BQ9C0K0 894 aaPredicted RBP19.99■□□□□ 0.79
VCX3B-201ENST00000381029 NHSQ6T4R5 1651 aa19.98■□□□□ 0.79
VCX3B-201ENST00000381029 KCNQ2O43526 872 aa19.98■□□□□ 0.79
VCX3B-201ENST00000381029 RALBP1Q15311 655 aa19.98■□□□□ 0.79
VCX3B-201ENST00000381029 SULT6B1Q6IMI4 303 aa19.98■□□□□ 0.79
VCX3B-201ENST00000381029 NKX1-1Q15270 411 aaPredicted RBP19.97■□□□□ 0.79
VCX3B-201ENST00000381029 PCDH11XQ9BZA7 1347 aa19.97■□□□□ 0.79
VCX3B-201ENST00000381029 PCDH11YQ9BZA8 1340 aa19.97■□□□□ 0.79
VCX3B-201ENST00000381029 CAMKK2Q96RR4 588 aa19.96■□□□□ 0.79
VCX3B-201ENST00000381029 PRKRIP1Q9H875 184 aaPredicted RBP19.95■□□□□ 0.78
VCX3B-201ENST00000381029 BAG6P46379 1132 aa19.94■□□□□ 0.78
VCX3B-201ENST00000381029 EN1Q05925 392 aaPredicted RBP19.94■□□□□ 0.78
VCX3B-201ENST00000381029 SPG7Q9UQ90 795 aa19.94■□□□□ 0.78
VCX3B-201ENST00000381029 APBA3O96018 575 aa19.93■□□□□ 0.78
VCX3B-201ENST00000381029 SF3B2Q13435 895 aaKnown RBP19.93■□□□□ 0.78
VCX3B-201ENST00000381029 ACSBG1Q96GR2 724 aa19.93■□□□□ 0.78
VCX3B-201ENST00000381029 TOGARAM1Q9Y4F4 1720 aa19.93■□□□□ 0.78
VCX3B-201ENST00000381029 PLSCR1O15162 318 aa19.92■□□□□ 0.78
VCX3B-201ENST00000381029 HMOX1P09601 288 aa19.92■□□□□ 0.78
VCX3B-201ENST00000381029 PHKG2P15735 406 aa19.92■□□□□ 0.78
VCX3B-201ENST00000381029 CFAP53Q96M91 514 aa19.92■□□□□ 0.78
VCX3B-201ENST00000381029 DOT1LQ8TEK3 1739 aa19.92■□□□□ 0.78
VCX3B-201ENST00000381029 RGPD3A6NKT7 1758 aaPredicted RBP19.91■□□□□ 0.78
VCX3B-201ENST00000381029 RGPD4Q7Z3J3 1758 aa19.91■□□□□ 0.78
VCX3B-201ENST00000381029 EZH2Q15910 746 aaKnown RBP19.91■□□□□ 0.78
VCX3B-201ENST00000381029 MYBBP1AQ9BQG0 1328 aaKnown RBP19.91■□□□□ 0.78
VCX3B-201ENST00000381029 AMOTQ4VCS5 1084 aa19.9■□□□□ 0.78
VCX3B-201ENST00000381029 PROM2Q8N271 834 aa19.9■□□□□ 0.78
VCX3B-201ENST00000381029 RSPH6AQ9H0K4 717 aa19.9■□□□□ 0.78
VCX3B-201ENST00000381029 RREB1Q92766 1687 aa19.9■□□□□ 0.78
VCX3B-201ENST00000381029 PRIM1P49642 420 aaKnown RBP19.89■□□□□ 0.77
VCX3B-201ENST00000381029 PLEKHO1Q53GL0 409 aaPredicted RBP19.89■□□□□ 0.77
VCX3B-201ENST00000381029 IFNL2Q8IZJ0 200 aa19.89■□□□□ 0.77
VCX3B-201ENST00000381029 BTAF1O14981 1849 aa19.88■□□□□ 0.77
VCX3B-201ENST00000381029 KDM6AO15550 1401 aaPredicted RBP19.88■□□□□ 0.77
VCX3B-201ENST00000381029 U2SURPO15042 1029 aaKnown RBP19.87■□□□□ 0.77
VCX3B-201ENST00000381029 MTHFSDQ2M296 383 aaKnown RBP19.85■□□□□ 0.77
VCX3B-201ENST00000381029 ZNF530Q6P9A1 599 aaPredicted RBP19.85■□□□□ 0.77
VCX3B-201ENST00000381029 NUDCQ9Y266 331 aa19.85■□□□□ 0.77
VCX3B-201ENST00000381029 NUP188Q5SRE5 1749 aa19.85■□□□□ 0.77
VCX3B-201ENST00000381029 FCHSD2O94868 740 aa19.84■□□□□ 0.77
VCX3B-201ENST00000381029 PHACTR3Q96KR7 559 aa19.84■□□□□ 0.77
VCX3B-201ENST00000381029 ADAMTS7Q9UKP4 1686 aa19.84■□□□□ 0.77
VCX3B-201ENST00000381029 ITGB4P16144 1822 aa19.82■□□□□ 0.76
VCX3B-201ENST00000381029 U2AF1L5P0DN76 240 aaPredicted RBP19.82■□□□□ 0.76
VCX3B-201ENST00000381029 PRKAR2BP31323 418 aa19.82■□□□□ 0.76
VCX3B-201ENST00000381029 U2AF1Q01081 240 aaKnown RBP eCLIP19.82■□□□□ 0.76
VCX3B-201ENST00000381029 TXNRD1Q16881 649 aa19.82■□□□□ 0.76
VCX3B-201ENST00000381029 AKAP4Q5JQC9 854 aa19.82■□□□□ 0.76
VCX3B-201ENST00000381029 DCAF5Q96JK2 942 aa19.82■□□□□ 0.76
VCX3B-201ENST00000381029 PIGBQ92521 554 aa19.81■□□□□ 0.76
VCX3B-201ENST00000381029 ERVV-2B6SEH9 535 aa19.8■□□□□ 0.76
VCX3B-201ENST00000381029 HSP90AB1P08238 724 aaKnown RBP19.8■□□□□ 0.76
VCX3B-201ENST00000381029 SYTL4Q96C24 671 aaPredicted RBP19.8■□□□□ 0.76
VCX3B-201ENST00000381029 PLEKHF1Q96S99 279 aa19.8■□□□□ 0.76
VCX3B-201ENST00000381029 KAT6BQ8WYB5 2073 aa19.8■□□□□ 0.76
VCX3B-201ENST00000381029 PAPPAQ13219 1627 aa19.8■□□□□ 0.76
VCX3B-201ENST00000381029 LY75O60449 1722 aa19.79■□□□□ 0.76
VCX3B-201ENST00000381029 MPRIPQ6WCQ1 1025 aa19.79■□□□□ 0.76
VCX3B-201ENST00000381029 LRRC4BQ9NT99 713 aa19.79■□□□□ 0.76
VCX3B-201ENST00000381029 MRC1P22897 1456 aa19.79■□□□□ 0.76
VCX3B-201ENST00000381029 C1orf141Q5JVX7 400 aa19.78■□□□□ 0.76
VCX3B-201ENST00000381029 SCN11AQ9UI33 1791 aa19.78■□□□□ 0.76
VCX3B-201ENST00000381029 CCDC184Q52MB2 194 aa19.77■□□□□ 0.76
VCX3B-201ENST00000381029 LGR6Q9HBX8 967 aa19.77■□□□□ 0.76
VCX3B-201ENST00000381029 GAS2L2Q8NHY3 880 aa19.76■□□□□ 0.75
VCX3B-201ENST00000381029 ANO8Q9HCE9 1232 aaPredicted RBP19.76■□□□□ 0.75
VCX3B-201ENST00000381029 RNMTO43148 476 aaKnown RBP19.75■□□□□ 0.75
VCX3B-201ENST00000381029 CEMIPQ8WUJ3 1361 aa19.74■□□□□ 0.75
VCX3B-201ENST00000381029 PALLDQ8WX93 1383 aa19.74■□□□□ 0.75
VCX3B-201ENST00000381029 MAP3K5Q99683 1374 aa19.74■□□□□ 0.75
VCX3B-201ENST00000381029 IL17REQ8NFR9 667 aa19.74■□□□□ 0.75
VCX3B-201ENST00000381029 ATG3Q9NT62 314 aa19.74■□□□□ 0.75
VCX3B-201ENST00000381029 TMOD3Q9NYL9 352 aa19.74■□□□□ 0.75
VCX3B-201ENST00000381029 ASAP1Q9ULH1 1129 aa19.74■□□□□ 0.75
VCX3B-201ENST00000381029 SLC27A3Q5K4L6 730 aa19.73■□□□□ 0.75
VCX3B-201ENST00000381029 NFATC2IPQ8NCF5 419 aa19.72■□□□□ 0.75
VCX3B-201ENST00000381029 GNAT3A8MTJ3 354 aa19.71■□□□□ 0.75
VCX3B-201ENST00000381029 KCNQ4P56696 695 aa19.71■□□□□ 0.75
VCX3B-201ENST00000381029 SLC52A2Q9HAB3 445 aa19.71■□□□□ 0.75
VCX3B-201ENST00000381029 VIRMAQ69YN4 1812 aaKnown RBP19.7■□□□□ 0.74
VCX3B-201ENST00000381029 CABP4P57796 275 aa19.7■□□□□ 0.74
VCX3B-201ENST00000381029 SMARCC1Q92922 1105 aaPredicted RBP19.7■□□□□ 0.74
VCX3B-201ENST00000381029 SLC4A9Q96Q91 983 aa19.7■□□□□ 0.74
VCX3B-201ENST00000381029 ADAMTS8Q9UP79 889 aa19.7■□□□□ 0.74
VCX3B-201ENST00000381029 ANP32CO43423 234 aa19.69■□□□□ 0.74
VCX3B-201ENST00000381029 R3HDM1Q15032 1099 aaKnown RBP19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms