RNA–Protein interactions for RNA: ENST00000380877.7

GABPB1-203, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPB1, Length 4,816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-203ENST00000380877 HIP1O00291 1037 aa14.82□□□□□ -0.04
GABPB1-203ENST00000380877 AKAP17AQ02040 695 aaKnown RBP14.82□□□□□ -0.04
GABPB1-203ENST00000380877 LARP1Q6PKG0 1096 aaKnown RBP14.82□□□□□ -0.04
GABPB1-203ENST00000380877 FLT4P35916 1363 aa14.81□□□□□ -0.04
GABPB1-203ENST00000380877 PTPRCP08575 1304 aa14.81□□□□□ -0.04
GABPB1-203ENST00000380877 RABEP1Q15276 862 aa14.81□□□□□ -0.04
GABPB1-203ENST00000380877 CNNM1Q9NRU3 951 aa14.81□□□□□ -0.04
GABPB1-203ENST00000380877 HSPA2P54652 639 aa14.81□□□□□ -0.04
GABPB1-203ENST00000380877 TMOD3Q9NYL9 352 aa14.81□□□□□ -0.04
GABPB1-203ENST00000380877 RALYLQ86SE5 291 aaKnown RBP14.81□□□□□ -0.04
GABPB1-203ENST00000380877 ZFYVE9O95405 1425 aa14.81□□□□□ -0.04
GABPB1-203ENST00000380877 VPS37CA5D8V6 355 aaPredicted RBP14.81□□□□□ -0.04
GABPB1-203ENST00000380877 ADAMTS2O95450 1211 aa14.81□□□□□ -0.04
GABPB1-203ENST00000380877 STARD3NLO95772 234 aa14.81□□□□□ -0.04
GABPB1-203ENST00000380877 IFNL2Q8IZJ0 200 aa14.81□□□□□ -0.04
GABPB1-203ENST00000380877 TMEM2Q9UHN6 1383 aa14.8□□□□□ -0.04
GABPB1-203ENST00000380877 GSE1Q14687 1217 aa14.8□□□□□ -0.04
GABPB1-203ENST00000380877 AACSQ86V21 672 aa14.8□□□□□ -0.04
GABPB1-203ENST00000380877 DNAAF4Q8WXU2 420 aa14.8□□□□□ -0.04
GABPB1-203ENST00000380877 CCDC57Q2TAC2 916 aa14.8□□□□□ -0.04
GABPB1-203ENST00000380877 TRPM2O94759 1503 aa14.8□□□□□ -0.04
GABPB1-203ENST00000380877 PTPRTO14522 1441 aa14.8□□□□□ -0.04
GABPB1-203ENST00000380877 AMOTL1Q8IY63 956 aa14.8□□□□□ -0.04
GABPB1-203ENST00000380877 PHACTR3Q96KR7 559 aa14.8□□□□□ -0.04
GABPB1-203ENST00000380877 PSMA5P28066 241 aa14.79□□□□□ -0.04
GABPB1-203ENST00000380877 TBC1D2BQ9UPU7 963 aa14.79□□□□□ -0.04
GABPB1-203ENST00000380877 MAP3K19Q56UN5 1328 aa14.79□□□□□ -0.04
GABPB1-203ENST00000380877 NFKBIBQ15653 356 aa14.79□□□□□ -0.04
GABPB1-203ENST00000380877 KDM5DQ9BY66 1539 aa14.78□□□□□ -0.04
GABPB1-203ENST00000380877 MAP4K4O95819 1239 aaPredicted RBP14.78□□□□□ -0.04
GABPB1-203ENST00000380877 CCDC158Q5M9N0 1113 aa14.78□□□□□ -0.04
GABPB1-203ENST00000380877 RASSF8Q8NHQ8 419 aa14.78□□□□□ -0.04
GABPB1-203ENST00000380877 FMNL2Q96PY5 1086 aa14.78□□□□□ -0.04
GABPB1-203ENST00000380877 KIF1BPQ96EK5 621 aa14.78□□□□□ -0.04
GABPB1-203ENST00000380877 HYPKQ9NX55 129 aa14.78□□□□□ -0.04
GABPB1-203ENST00000380877 CEP126Q9P2H0 1117 aa14.77□□□□□ -0.04
GABPB1-203ENST00000380877 C8orf58Q8NAV2 365 aa14.77□□□□□ -0.04
GABPB1-203ENST00000380877 ARHGAP45Q92619 1136 aa14.77□□□□□ -0.04
GABPB1-203ENST00000380877 LRRFIP2Q9Y608 721 aaKnown RBP14.77□□□□□ -0.04
GABPB1-203ENST00000380877 SMARCA5O60264 1052 aaPredicted RBP14.77□□□□□ -0.05
GABPB1-203ENST00000380877 LTKP29376 864 aa14.77□□□□□ -0.05
GABPB1-203ENST00000380877 MCM2P49736 904 aa14.77□□□□□ -0.05
GABPB1-203ENST00000380877 KIAA2012Q0VF49 1180 aa14.77□□□□□ -0.05
GABPB1-203ENST00000380877 NFXL1Q6ZNB6 911 aa14.77□□□□□ -0.05
GABPB1-203ENST00000380877 EYA1Q99502 592 aa14.77□□□□□ -0.05
GABPB1-203ENST00000380877 SBNO2Q9Y2G9 1366 aa14.77□□□□□ -0.05
GABPB1-203ENST00000380877 MTHFSDQ2M296 383 aaKnown RBP14.76□□□□□ -0.05
GABPB1-203ENST00000380877 MYD88Q99836 296 aa14.76□□□□□ -0.05
GABPB1-203ENST00000380877 EDC4Q6P2E9 1401 aaKnown RBP14.76□□□□□ -0.05
GABPB1-203ENST00000380877 GCP02774 474 aa14.76□□□□□ -0.05
GABPB1-203ENST00000380877 TRIM29Q14134 588 aa14.76□□□□□ -0.05
GABPB1-203ENST00000380877 NUTM1Q86Y26 1132 aa14.76□□□□□ -0.05
GABPB1-203ENST00000380877 IGHDP01880 384 aa14.76□□□□□ -0.05
GABPB1-203ENST00000380877 TTC39AQ5SRH9 613 aa14.76□□□□□ -0.05
GABPB1-203ENST00000380877 CHAF1AQ13111 956 aaPredicted RBP14.75□□□□□ -0.05
GABPB1-203ENST00000380877 RSPH6AQ9H0K4 717 aa14.75□□□□□ -0.05
GABPB1-203ENST00000380877 FBXW7Q969H0 707 aa14.75□□□□□ -0.05
GABPB1-203ENST00000380877 LRRC59Q96AG4 307 aaKnown RBP14.75□□□□□ -0.05
GABPB1-203ENST00000380877 CCDC85AQ96PX6 553 aaPredicted RBP14.75□□□□□ -0.05
GABPB1-203ENST00000380877 MPHOSPH8Q99549 860 aa14.75□□□□□ -0.05
GABPB1-203ENST00000380877 UGGT1Q9NYU2 1555 aa14.75□□□□□ -0.05
GABPB1-203ENST00000380877 CDC42BPAQ5VT25 1732 aa14.75□□□□□ -0.05
GABPB1-203ENST00000380877 ERICH2A1L162 156 aa14.75□□□□□ -0.05
GABPB1-203ENST00000380877 MX1P20591 662 aa14.75□□□□□ -0.05
GABPB1-203ENST00000380877 TPM4P67936 248 aa14.75□□□□□ -0.05
GABPB1-203ENST00000380877 PI4KAP2A4QPH2 592 aa14.75□□□□□ -0.05
GABPB1-203ENST00000380877 ANXA1P04083 346 aa14.75□□□□□ -0.05
GABPB1-203ENST00000380877 PI4KAP1Q8N8J0 262 aa14.75□□□□□ -0.05
GABPB1-203ENST00000380877 PLA2R1Q13018 1463 aa14.74□□□□□ -0.05
GABPB1-203ENST00000380877 CABLES1Q8TDN4 633 aa14.74□□□□□ -0.05
GABPB1-203ENST00000380877 SPINK5Q9NQ38 1064 aaPredicted RBP14.74□□□□□ -0.05
GABPB1-203ENST00000380877 EXOC5O00471 708 aa14.74□□□□□ -0.05
GABPB1-203ENST00000380877 RAB11FIP3O75154 756 aa14.74□□□□□ -0.05
GABPB1-203ENST00000380877 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.74□□□□□ -0.05
GABPB1-203ENST00000380877 PIK3R4Q99570 1358 aa14.74□□□□□ -0.05
GABPB1-203ENST00000380877 MAGI2Q86UL8 1455 aa14.74□□□□□ -0.05
GABPB1-203ENST00000380877 PCDHB15Q9Y5E8 787 aa14.73□□□□□ -0.05
GABPB1-203ENST00000380877 HOXC9P31274 260 aa14.72□□□□□ -0.05
GABPB1-203ENST00000380877 GLRX3O76003 335 aaKnown RBP14.72□□□□□ -0.05
GABPB1-203ENST00000380877 AKAP4Q5JQC9 854 aa14.72□□□□□ -0.05
GABPB1-203ENST00000380877 TSPYL6Q8N831 410 aa14.72□□□□□ -0.05
GABPB1-203ENST00000380877 ADCY10Q96PN6 1610 aa14.72□□□□□ -0.05
GABPB1-203ENST00000380877 VAMP4O75379 141 aa14.72□□□□□ -0.05
GABPB1-203ENST00000380877 CWC27Q6UX04 472 aaKnown RBP14.72□□□□□ -0.05
GABPB1-203ENST00000380877 MAP3K2Q9Y2U5 619 aa14.72□□□□□ -0.05
GABPB1-203ENST00000380877 MRPL50Q8N5N7 158 aaKnown RBP14.72□□□□□ -0.05
GABPB1-203ENST00000380877 IL13P35225 146 aa14.71□□□□□ -0.05
GABPB1-203ENST00000380877 GLIPR1L2Q4G1C9 344 aa14.71□□□□□ -0.05
GABPB1-203ENST00000380877 SIRT1Q96EB6 747 aa14.71□□□□□ -0.05
GABPB1-203ENST00000380877 FOSBP53539 338 aa14.71□□□□□ -0.05
GABPB1-203ENST00000380877 FKBP4Q02790 459 aaKnown RBP eCLIP14.71□□□□□ -0.05
GABPB1-203ENST00000380877 BICD2Q8TD16 824 aa14.71□□□□□ -0.05
GABPB1-203ENST00000380877 IP6K1Q92551 441 aa14.71□□□□□ -0.05
GABPB1-203ENST00000380877 NGLY1Q96IV0 654 aa14.71□□□□□ -0.05
GABPB1-203ENST00000380877 ORAI2Q96SN7 254 aa14.71□□□□□ -0.05
GABPB1-203ENST00000380877 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.71□□□□□ -0.05
GABPB1-203ENST00000380877 SNRPA1P09661 255 aaKnown RBP14.71□□□□□ -0.05
GABPB1-203ENST00000380877 HECW2Q9P2P5 1572 aa14.71□□□□□ -0.06
GABPB1-203ENST00000380877 A0A087WZG4 1122 aa14.71□□□□□ -0.06
GABPB1-203ENST00000380877 PLEKHG3A1L390 1219 aa14.71□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 127.3 ms