RNA–Protein interactions for RNA: ENST00000378980.7

CNTFR-202, Transcript of ciliary neurotrophic factor receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTFR, Length 2,052 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTFR-202ENST00000378980 LRRC37A3O60309 1634 aa27.06■■□□□ 1.92
CNTFR-202ENST00000378980 KRT24Q2M2I5 525 aa27.06■■□□□ 1.92
CNTFR-202ENST00000378980 GAS2L2Q8NHY3 880 aa27.06■■□□□ 1.92
CNTFR-202ENST00000378980 RTL1A6NKG5 1358 aa27.05■■□□□ 1.92
CNTFR-202ENST00000378980 RTF1Q92541 710 aaKnown RBP27.05■■□□□ 1.92
CNTFR-202ENST00000378980 NUCB1Q02818 461 aa27.04■■□□□ 1.92
CNTFR-202ENST00000378980 RBM33Q96EV2 1170 aaKnown RBP27.04■■□□□ 1.92
CNTFR-202ENST00000378980 DAXXQ9UER7 740 aaPredicted RBP27.04■■□□□ 1.92
CNTFR-202ENST00000378980 NFAT5O94916 1531 aa27.02■■□□□ 1.92
CNTFR-202ENST00000378980 RGS12O14924 1447 aa27.02■■□□□ 1.92
CNTFR-202ENST00000378980 SLC4A3P48751 1232 aa27.02■■□□□ 1.92
CNTFR-202ENST00000378980 C1orf115Q9H7X2 142 aa27.01■■□□□ 1.91
CNTFR-202ENST00000378980 HTATSF1O43719 755 aaKnown RBP27■■□□□ 1.91
CNTFR-202ENST00000378980 C14orf37Q86TY3 774 aa27■■□□□ 1.91
CNTFR-202ENST00000378980 INTS3Q68E01 1043 aaKnown RBP26.99■■□□□ 1.91
CNTFR-202ENST00000378980 GCC1Q96CN9 775 aa26.99■■□□□ 1.91
CNTFR-202ENST00000378980 UPF2Q9HAU5 1272 aaKnown RBP26.99■■□□□ 1.91
CNTFR-202ENST00000378980 CHD1LQ86WJ1 897 aa26.98■■□□□ 1.91
CNTFR-202ENST00000378980 TSPYL4Q9UJ04 414 aa26.98■■□□□ 1.91
CNTFR-202ENST00000378980 ESCO1Q5FWF5 840 aa26.97■■□□□ 1.91
CNTFR-202ENST00000378980 MIS18AQ9NYP9 233 aa26.97■■□□□ 1.91
CNTFR-202ENST00000378980 PTPRCP08575 1304 aa26.97■■□□□ 1.91
CNTFR-202ENST00000378980 SIRT2Q8IXJ6 389 aa26.97■■□□□ 1.91
CNTFR-202ENST00000378980 PHRF1Q9P1Y6 1649 aaKnown RBP26.96■■□□□ 1.91
CNTFR-202ENST00000378980 TBC1D32Q96NH3 1257 aa26.96■■□□□ 1.91
CNTFR-202ENST00000378980 RTL5Q5HYW3 569 aaPredicted RBP26.96■■□□□ 1.91
CNTFR-202ENST00000378980 LNPKQ9C0E8 428 aa26.96■■□□□ 1.91
CNTFR-202ENST00000378980 GNAT3A8MTJ3 354 aa26.94■■□□□ 1.9
CNTFR-202ENST00000378980 PSME1Q06323 249 aa26.94■■□□□ 1.9
CNTFR-202ENST00000378980 LTV1Q96GA3 475 aaPredicted RBP26.94■■□□□ 1.9
CNTFR-202ENST00000378980 MAP3K5Q99683 1374 aa26.93■■□□□ 1.9
CNTFR-202ENST00000378980 IP6K1Q92551 441 aa26.93■■□□□ 1.9
CNTFR-202ENST00000378980 MSH6P52701 1360 aa26.92■■□□□ 1.9
CNTFR-202ENST00000378980 FAM208AQ9UK61 1670 aaKnown RBP26.9■■□□□ 1.9
CNTFR-202ENST00000378980 SLC4A2P04920 1241 aa26.9■■□□□ 1.9
CNTFR-202ENST00000378980 ANKRD45Q5TZF3 282 aa26.9■■□□□ 1.9
CNTFR-202ENST00000378980 KCNH5Q8NCM2 988 aa26.89■■□□□ 1.9
CNTFR-202ENST00000378980 USP35Q9P2H5 1018 aa26.89■■□□□ 1.89
CNTFR-202ENST00000378980 ATP10DQ9P241 1426 aa26.88■■□□□ 1.89
CNTFR-202ENST00000378980 RGPD2P0DJD1 1756 aa26.87■■□□□ 1.89
CNTFR-202ENST00000378980 USHBP1Q8N6Y0 703 aa26.87■■□□□ 1.89
CNTFR-202ENST00000378980 SLIT3O75094 1523 aa26.87■■□□□ 1.89
CNTFR-202ENST00000378980 CACNA1FO60840 1977 aa26.87■■□□□ 1.89
CNTFR-202ENST00000378980 IL17REQ8NFR9 667 aa26.86■■□□□ 1.89
CNTFR-202ENST00000378980 ORAI2Q96SN7 254 aa26.86■■□□□ 1.89
CNTFR-202ENST00000378980 TRPM3Q9HCF6 1732 aaPredicted RBP26.86■■□□□ 1.89
CNTFR-202ENST00000378980 BECN1Q14457 450 aa26.86■■□□□ 1.89
CNTFR-202ENST00000378980 BABAM1Q9NWV8 329 aa26.85■■□□□ 1.89
CNTFR-202ENST00000378980 BMP2KLQ5H9B9 411 aa26.85■■□□□ 1.89
CNTFR-202ENST00000378980 ANKRD44Q8N8A2 993 aa26.84■■□□□ 1.89
CNTFR-202ENST00000378980 KIF1AQ12756 1690 aa26.84■■□□□ 1.89
CNTFR-202ENST00000378980 G2E3Q7L622 706 aa26.83■■□□□ 1.89
CNTFR-202ENST00000378980 NBPF6Q5VWK0 638 aa26.83■■□□□ 1.89
CNTFR-202ENST00000378980 NBPF4Q96M43 638 aa26.83■■□□□ 1.89
CNTFR-202ENST00000378980 DCTPP1Q9H773 170 aa26.83■■□□□ 1.89
CNTFR-202ENST00000378980 SOS1Q07889 1333 aaPredicted RBP26.83■■□□□ 1.88
CNTFR-202ENST00000378980 MFAP1P55081 439 aaKnown RBP26.82■■□□□ 1.88
CNTFR-202ENST00000378980 TAF7Q15545 349 aaPredicted RBP26.81■■□□□ 1.88
CNTFR-202ENST00000378980 RPAP2Q8IXW5 612 aaPredicted RBP26.81■■□□□ 1.88
CNTFR-202ENST00000378980 MED1Q15648 1581 aaPredicted RBP26.81■■□□□ 1.88
CNTFR-202ENST00000378980 STK31Q9BXU1 1019 aa26.81■■□□□ 1.88
CNTFR-202ENST00000378980 C22orf23Q9BZE7 217 aa26.81■■□□□ 1.88
CNTFR-202ENST00000378980 CEP85Q6P2H3 762 aa26.8■■□□□ 1.88
CNTFR-202ENST00000378980 MEIS3Q99687 375 aa26.8■■□□□ 1.88
CNTFR-202ENST00000378980 PROSER2Q86WR7 435 aaPredicted RBP26.8■■□□□ 1.88
CNTFR-202ENST00000378980 CEMIPQ8WUJ3 1361 aa26.8■■□□□ 1.88
CNTFR-202ENST00000378980 LMO7Q8WWI1 1683 aa26.8■■□□□ 1.88
CNTFR-202ENST00000378980 CCDC30Q5VVM6 783 aa26.79■■□□□ 1.88
CNTFR-202ENST00000378980 GCP02774 474 aa26.78■■□□□ 1.88
CNTFR-202ENST00000378980 DEKP35659 375 aaKnown RBP26.78■■□□□ 1.88
CNTFR-202ENST00000378980 CCT4P50991 539 aaKnown RBP26.78■■□□□ 1.88
CNTFR-202ENST00000378980 XPCQ01831 940 aaPredicted RBP26.78■■□□□ 1.88
CNTFR-202ENST00000378980 N4BP2Q86UW6 1770 aaPredicted RBP26.78■■□□□ 1.88
CNTFR-202ENST00000378980 C1orf167Q5SNV9 1468 aa26.78■■□□□ 1.88
CNTFR-202ENST00000378980 ZBTB7CA1YPR0 619 aa26.78■■□□□ 1.88
CNTFR-202ENST00000378980 ARHGEF25Q86VW2 580 aa26.77■■□□□ 1.88
CNTFR-202ENST00000378980 NCAPD2Q15021 1401 aa26.77■■□□□ 1.88
CNTFR-202ENST00000378980 F6X3S4 739 aa26.76■■□□□ 1.87
CNTFR-202ENST00000378980 NFKBIBQ15653 356 aa26.76■■□□□ 1.87
CNTFR-202ENST00000378980 KDM3BQ7LBC6 1761 aa26.76■■□□□ 1.87
CNTFR-202ENST00000378980 CAMTA1Q9Y6Y1 1673 aa26.75■■□□□ 1.87
CNTFR-202ENST00000378980 FLIIQ13045 1269 aa26.74■■□□□ 1.87
CNTFR-202ENST00000378980 SLC4A10Q6U841 1118 aa26.74■■□□□ 1.87
CNTFR-202ENST00000378980 LRRC59Q96AG4 307 aaKnown RBP26.74■■□□□ 1.87
CNTFR-202ENST00000378980 TBC1D2Q9BYX2 928 aa26.74■■□□□ 1.87
CNTFR-202ENST00000378980 C19orf44Q9H6X5 657 aa26.74■■□□□ 1.87
CNTFR-202ENST00000378980 MST1RQ04912 1400 aa26.73■■□□□ 1.87
CNTFR-202ENST00000378980 ALS2Q96Q42 1657 aa26.73■■□□□ 1.87
CNTFR-202ENST00000378980 KRT28Q7Z3Y7 464 aa26.72■■□□□ 1.87
CNTFR-202ENST00000378980 PLEKHM2Q8IWE5 1019 aa26.71■■□□□ 1.87
CNTFR-202ENST00000378980 LMOD2Q6P5Q4 547 aa26.7■■□□□ 1.87
CNTFR-202ENST00000378980 PXDNLA1KZ92 1463 aa26.7■■□□□ 1.86
CNTFR-202ENST00000378980 FKBP5Q13451 457 aaPredicted RBP26.7■■□□□ 1.86
CNTFR-202ENST00000378980 NECTIN2Q92692 538 aa26.7■■□□□ 1.86
CNTFR-202ENST00000378980 STRCP1A6NGW2 1772 aa26.69■■□□□ 1.86
CNTFR-202ENST00000378980 RBM25P49756 843 aaKnown RBP26.69■■□□□ 1.86
CNTFR-202ENST00000378980 AKAP4Q5JQC9 854 aa26.69■■□□□ 1.86
CNTFR-202ENST00000378980 LGR6Q9HBX8 967 aa26.69■■□□□ 1.86
CNTFR-202ENST00000378980 RGPD5Q99666 1765 aa26.68■■□□□ 1.86
CNTFR-202ENST00000378980 PLEKHO1Q53GL0 409 aaPredicted RBP26.68■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms