RNA–Protein interactions for RNA: ENST00000378747.7

OPTN-202, Transcript of optineurin, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene OPTN, Length 3,400 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-202ENST00000378747 PTPRCP08575 1304 aa11.15□□□□□ -0.62
OPTN-202ENST00000378747 TNRQ92752 1358 aa11.15□□□□□ -0.62
OPTN-202ENST00000378747 CYP2E1P05181 493 aaPredicted RBP11.15□□□□□ -0.62
OPTN-202ENST00000378747 GSPT1P15170 499 aaKnown RBP11.15□□□□□ -0.62
OPTN-202ENST00000378747 TBC1D9Q6ZT07 1266 aa11.15□□□□□ -0.62
OPTN-202ENST00000378747 PLEKHM2Q8IWE5 1019 aa11.15□□□□□ -0.62
OPTN-202ENST00000378747 ANKRD44Q8N8A2 993 aa11.15□□□□□ -0.62
OPTN-202ENST00000378747 SALL3Q9BXA9 1300 aa11.15□□□□□ -0.62
OPTN-202ENST00000378747 LMO7Q8WWI1 1683 aa11.15□□□□□ -0.62
OPTN-202ENST00000378747 XRCC6P12956 609 aaKnown RBP eCLIP11.15□□□□□ -0.63
OPTN-202ENST00000378747 TWISTNBQ3B726 338 aaPredicted RBP11.15□□□□□ -0.63
OPTN-202ENST00000378747 OSBPL3Q9H4L5 887 aa11.15□□□□□ -0.63
OPTN-202ENST00000378747 TTC21BQ7Z4L5 1316 aa11.14□□□□□ -0.63
OPTN-202ENST00000378747 DDX11L8A8MPP1 907 aa11.14□□□□□ -0.63
OPTN-202ENST00000378747 SLKQ9H2G2 1235 aaPredicted RBP11.14□□□□□ -0.63
OPTN-202ENST00000378747 MFAP1P55081 439 aaKnown RBP11.14□□□□□ -0.63
OPTN-202ENST00000378747 ANKARQ7Z5J8 1434 aa11.14□□□□□ -0.63
OPTN-202ENST00000378747 CEP170BQ9Y4F5 1589 aaPredicted RBP11.14□□□□□ -0.63
OPTN-202ENST00000378747 PTMSP20962 102 aa11.13□□□□□ -0.63
OPTN-202ENST00000378747 EIF4A2Q14240 407 aaKnown RBP11.13□□□□□ -0.63
OPTN-202ENST00000378747 ZRANB1Q9UGI0 708 aa11.13□□□□□ -0.63
OPTN-202ENST00000378747 SOS1Q07889 1333 aaPredicted RBP11.13□□□□□ -0.63
OPTN-202ENST00000378747 FBLN1P23142 703 aa11.13□□□□□ -0.63
OPTN-202ENST00000378747 SIPA1L3O60292 1781 aaPredicted RBP11.12□□□□□ -0.63
OPTN-202ENST00000378747 KDM4FA0A1W2PPD8 638 aa11.12□□□□□ -0.63
OPTN-202ENST00000378747 CD2BP2O95400 341 aaKnown RBP11.12□□□□□ -0.63
OPTN-202ENST00000378747 TTC22Q5TAA0 569 aa11.12□□□□□ -0.63
OPTN-202ENST00000378747 RPAP2Q8IXW5 612 aaPredicted RBP11.12□□□□□ -0.63
OPTN-202ENST00000378747 HSCBQ8IWL3 235 aa11.12□□□□□ -0.63
OPTN-202ENST00000378747 COG3Q96JB2 828 aa11.12□□□□□ -0.63
OPTN-202ENST00000378747 LNPKQ9C0E8 428 aa11.12□□□□□ -0.63
OPTN-202ENST00000378747 TTC21AQ8NDW8 1320 aa11.12□□□□□ -0.63
OPTN-202ENST00000378747 NCAPD2Q15021 1401 aa11.12□□□□□ -0.63
OPTN-202ENST00000378747 TRAK2O60296 914 aa11.12□□□□□ -0.63
OPTN-202ENST00000378747 CDC45O75419 566 aa11.11□□□□□ -0.63
OPTN-202ENST00000378747 THUMPD2Q9BTF0 503 aaKnown RBP11.11□□□□□ -0.63
OPTN-202ENST00000378747 SBNO1A3KN83 1393 aa11.11□□□□□ -0.63
OPTN-202ENST00000378747 CEP85Q6P2H3 762 aa11.11□□□□□ -0.63
OPTN-202ENST00000378747 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.11□□□□□ -0.63
OPTN-202ENST00000378747 TNPO1Q92973 898 aaKnown RBP11.11□□□□□ -0.63
OPTN-202ENST00000378747 HAP1P54257 671 aaPredicted RBP11.1□□□□□ -0.63
OPTN-202ENST00000378747 IGSF1Q8N6C5 1336 aa11.1□□□□□ -0.63
OPTN-202ENST00000378747 K7ELQ4 463 aaPredicted RBP11.1□□□□□ -0.63
OPTN-202ENST00000378747 HMOX1P09601 288 aa11.1□□□□□ -0.63
OPTN-202ENST00000378747 USP26Q9BXU7 913 aa11.1□□□□□ -0.63
OPTN-202ENST00000378747 LTN1O94822 1766 aa11.1□□□□□ -0.63
OPTN-202ENST00000378747 ZNF142P52746 1687 aaPredicted RBP11.1□□□□□ -0.63
OPTN-202ENST00000378747 HTATSF1O43719 755 aaKnown RBP11.1□□□□□ -0.63
OPTN-202ENST00000378747 MRE11P49959 708 aa11.1□□□□□ -0.63
OPTN-202ENST00000378747 NFAT5O94916 1531 aa11.1□□□□□ -0.63
OPTN-202ENST00000378747 MSH6P52701 1360 aa11.09□□□□□ -0.63
OPTN-202ENST00000378747 RRAGDQ9NQL2 400 aaPredicted RBP11.09□□□□□ -0.63
OPTN-202ENST00000378747 CHD2O14647 1828 aaKnown RBP11.09□□□□□ -0.63
OPTN-202ENST00000378747 SKOR2Q2VWA4 1001 aaPredicted RBP11.09□□□□□ -0.63
OPTN-202ENST00000378747 BABAM1Q9NWV8 329 aa11.09□□□□□ -0.63
OPTN-202ENST00000378747 HDGFP51858 240 aaKnown RBP11.09□□□□□ -0.63
OPTN-202ENST00000378747 ANKRD45Q5TZF3 282 aa11.09□□□□□ -0.63
OPTN-202ENST00000378747 FER1L4A9Z1Z3 1794 aa11.08□□□□□ -0.64
OPTN-202ENST00000378747 GOLGA6L3A6NEY3 463 aa11.08□□□□□ -0.64
OPTN-202ENST00000378747 FAM83GA6ND36 823 aa11.07□□□□□ -0.64
OPTN-202ENST00000378747 RABEP1Q15276 862 aa11.07□□□□□ -0.64
OPTN-202ENST00000378747 NCKAP5LQ9HCH0 1330 aa11.07□□□□□ -0.64
OPTN-202ENST00000378747 EPB41L2O43491 1005 aaKnown RBP11.07□□□□□ -0.64
OPTN-202ENST00000378747 TXNDC2Q86VQ3 553 aa11.07□□□□□ -0.64
OPTN-202ENST00000378747 FLT4P35916 1363 aa11.07□□□□□ -0.64
OPTN-202ENST00000378747 ACEP12821 1306 aa11.07□□□□□ -0.64
OPTN-202ENST00000378747 CLCN1P35523 988 aa11.07□□□□□ -0.64
OPTN-202ENST00000378747 RRS1Q15050 365 aaKnown RBP11.06□□□□□ -0.64
OPTN-202ENST00000378747 AEBP1Q8IUX7 1158 aa11.06□□□□□ -0.64
OPTN-202ENST00000378747 GAS2L2Q8NHY3 880 aa11.06□□□□□ -0.64
OPTN-202ENST00000378747 C1orf115Q9H7X2 142 aa11.06□□□□□ -0.64
OPTN-202ENST00000378747 PPP1R9BQ96SB3 815 aa11.05□□□□□ -0.64
OPTN-202ENST00000378747 OVOS2A0A0G2JMS6 1433 aa11.05□□□□□ -0.64
OPTN-202ENST00000378747 AOX1Q06278 1338 aa11.05□□□□□ -0.64
OPTN-202ENST00000378747 MAP3K19Q56UN5 1328 aa11.05□□□□□ -0.64
OPTN-202ENST00000378747 MST1RQ04912 1400 aa11.04□□□□□ -0.64
OPTN-202ENST00000378747 GRPEL1Q9HAV7 217 aa11.04□□□□□ -0.64
OPTN-202ENST00000378747 STAP2Q9UGK3 403 aa11.04□□□□□ -0.64
OPTN-202ENST00000378747 AK9Q5TCS8 1911 aa11.04□□□□□ -0.64
OPTN-202ENST00000378747 CEMIPQ8WUJ3 1361 aa11.04□□□□□ -0.64
OPTN-202ENST00000378747 ZNF445P59923 1031 aa11.04□□□□□ -0.64
OPTN-202ENST00000378747 KLHL40Q2TBA0 621 aa11.04□□□□□ -0.64
OPTN-202ENST00000378747 ABCC6O95255 1503 aa11.04□□□□□ -0.64
OPTN-202ENST00000378747 GAS2L3Q86XJ1 694 aa11.03□□□□□ -0.64
OPTN-202ENST00000378747 SPRYD3Q8NCJ5 442 aa11.03□□□□□ -0.64
OPTN-202ENST00000378747 GBP4Q96PP9 640 aa11.03□□□□□ -0.64
OPTN-202ENST00000378747 TBX22Q9Y458 520 aa11.03□□□□□ -0.64
OPTN-202ENST00000378747 LTKP29376 864 aa11.03□□□□□ -0.64
OPTN-202ENST00000378747 SLIT3O75094 1523 aa11.03□□□□□ -0.64
OPTN-202ENST00000378747 SDSP20132 328 aa11.03□□□□□ -0.64
OPTN-202ENST00000378747 CWC22Q9HCG8 908 aaKnown RBP11.03□□□□□ -0.64
OPTN-202ENST00000378747 STAG3Q9UJ98 1225 aa11.03□□□□□ -0.64
OPTN-202ENST00000378747 CCT4P50991 539 aaKnown RBP11.02□□□□□ -0.64
OPTN-202ENST00000378747 DCTN1Q14203 1278 aa11.02□□□□□ -0.64
OPTN-202ENST00000378747 SULT6B1Q6IMI4 303 aa11.02□□□□□ -0.64
OPTN-202ENST00000378747 PANK2Q9BZ23 570 aa11.02□□□□□ -0.64
OPTN-202ENST00000378747 TRPM3Q9HCF6 1732 aaPredicted RBP11.02□□□□□ -0.64
OPTN-202ENST00000378747 RBM42Q9BTD8 480 aaKnown RBP11.02□□□□□ -0.65
OPTN-202ENST00000378747 ADGRL3Q9HAR2 1447 aa11.02□□□□□ -0.65
OPTN-202ENST00000378747 BAG4O95429 457 aaKnown RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms