RNA–Protein interactions for RNA: ENST00000378551.6

PPM1B-204, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPM1B, Length 3,877 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1B-204ENST00000378551 GPATCH3Q96I76 525 aa18.64■□□□□ 0.57
PPM1B-204ENST00000378551 JAKMIP1Q96N16 626 aaKnown RBP18.64■□□□□ 0.57
PPM1B-204ENST00000378551 DNAJC2Q99543 621 aaKnown RBP18.64■□□□□ 0.57
PPM1B-204ENST00000378551 GSPT1P15170 499 aaKnown RBP18.64■□□□□ 0.57
PPM1B-204ENST00000378551 NEUROD6Q96NK8 337 aa18.64■□□□□ 0.57
PPM1B-204ENST00000378551 FMNL2Q96PY5 1086 aa18.64■□□□□ 0.57
PPM1B-204ENST00000378551 PSME1Q06323 249 aa18.63■□□□□ 0.57
PPM1B-204ENST00000378551 FSD1Q9BTV5 496 aa18.63■□□□□ 0.57
PPM1B-204ENST00000378551 ERVK-7P63135 1459 aa18.63■□□□□ 0.57
PPM1B-204ENST00000378551 CASTP20810 708 aaKnown RBP18.63■□□□□ 0.57
PPM1B-204ENST00000378551 FAM184AQ8NB25 1140 aa18.63■□□□□ 0.57
PPM1B-204ENST00000378551 CLCN1P35523 988 aa18.63■□□□□ 0.57
PPM1B-204ENST00000378551 TAF7Q15545 349 aaPredicted RBP18.63■□□□□ 0.57
PPM1B-204ENST00000378551 C1orf141Q5JVX7 400 aa18.63■□□□□ 0.57
PPM1B-204ENST00000378551 CLASRPQ8N2M8 674 aaKnown RBP18.63■□□□□ 0.57
PPM1B-204ENST00000378551 PIP4K2AP48426 406 aaPredicted RBP18.62■□□□□ 0.57
PPM1B-204ENST00000378551 C17orf53Q8N3J3 647 aaPredicted RBP18.62■□□□□ 0.57
PPM1B-204ENST00000378551 DDX11Q96FC9 970 aa18.62■□□□□ 0.57
PPM1B-204ENST00000378551 CCDC85AQ96PX6 553 aaPredicted RBP18.62■□□□□ 0.57
PPM1B-204ENST00000378551 ABCC11Q96J66 1382 aa18.62■□□□□ 0.57
PPM1B-204ENST00000378551 EIF4A2Q14240 407 aaKnown RBP18.62■□□□□ 0.57
PPM1B-204ENST00000378551 FLIIQ13045 1269 aa18.62■□□□□ 0.57
PPM1B-204ENST00000378551 PRPF40BQ6NWY9 871 aaKnown RBP18.62■□□□□ 0.57
PPM1B-204ENST00000378551 ATP10AO60312 1499 aa18.62■□□□□ 0.57
PPM1B-204ENST00000378551 HCLS1P14317 486 aaPredicted RBP18.61■□□□□ 0.57
PPM1B-204ENST00000378551 G3BP1Q13283 466 aaKnown RBP eCLIP18.61■□□□□ 0.57
PPM1B-204ENST00000378551 CCDC8Q9H0W5 538 aaPredicted RBP18.61■□□□□ 0.57
PPM1B-204ENST00000378551 TSC1Q92574 1164 aa18.61■□□□□ 0.57
PPM1B-204ENST00000378551 PKNOX2Q96KN3 472 aa18.61■□□□□ 0.57
PPM1B-204ENST00000378551 TFIP11Q9UBB9 837 aaKnown RBP18.61■□□□□ 0.57
PPM1B-204ENST00000378551 GNL2Q13823 731 aaKnown RBP18.61■□□□□ 0.57
PPM1B-204ENST00000378551 MPRIPQ6WCQ1 1025 aa18.61■□□□□ 0.57
PPM1B-204ENST00000378551 CREBRFQ8IUR6 639 aa18.61■□□□□ 0.57
PPM1B-204ENST00000378551 NECAB1Q8N987 351 aa18.61■□□□□ 0.57
PPM1B-204ENST00000378551 RBSNQ9H1K0 784 aa18.61■□□□□ 0.57
PPM1B-204ENST00000378551 TULP1O00294 542 aaPredicted RBP18.6■□□□□ 0.57
PPM1B-204ENST00000378551 PDE1AP54750 535 aa18.6■□□□□ 0.57
PPM1B-204ENST00000378551 CEP85Q6P2H3 762 aa18.6■□□□□ 0.57
PPM1B-204ENST00000378551 SRCIN1Q9C0H9 1055 aa18.6■□□□□ 0.57
PPM1B-204ENST00000378551 RIC3Q7Z5B4 369 aa18.6■□□□□ 0.57
PPM1B-204ENST00000378551 CKAP2LQ8IYA6 745 aa18.6■□□□□ 0.57
PPM1B-204ENST00000378551 KLHL40Q2TBA0 621 aa18.6■□□□□ 0.57
PPM1B-204ENST00000378551 CCT4P50991 539 aaKnown RBP18.59■□□□□ 0.57
PPM1B-204ENST00000378551 SF3A1Q15459 793 aaKnown RBP18.59■□□□□ 0.57
PPM1B-204ENST00000378551 TTC12Q9H892 705 aaPredicted RBP18.59■□□□□ 0.57
PPM1B-204ENST00000378551 TOMM22Q9NS69 142 aa18.59■□□□□ 0.57
PPM1B-204ENST00000378551 ADGBQ8N7X0 1667 aa18.59■□□□□ 0.57
PPM1B-204ENST00000378551 AACSQ86V21 672 aa18.59■□□□□ 0.57
PPM1B-204ENST00000378551 SIRT2Q8IXJ6 389 aa18.59■□□□□ 0.57
PPM1B-204ENST00000378551 BOLA2Q9H3K6 86 aa18.59■□□□□ 0.57
PPM1B-204ENST00000378551 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.59■□□□□ 0.573e-7■□□□□ 11.1
PPM1B-204ENST00000378551 MBD3O95983 291 aa18.58■□□□□ 0.57
PPM1B-204ENST00000378551 GIMAP6Q6P9H5 292 aa18.58■□□□□ 0.57
PPM1B-204ENST00000378551 CNTROBQ8N137 903 aa18.58■□□□□ 0.57
PPM1B-204ENST00000378551 BECN2A8MW95 431 aa18.58■□□□□ 0.56
PPM1B-204ENST00000378551 ESCO1Q5FWF5 840 aa18.58■□□□□ 0.56
PPM1B-204ENST00000378551 NLRP2Q9NX02 1062 aa18.58■□□□□ 0.56
PPM1B-204ENST00000378551 ACEP12821 1306 aa18.58■□□□□ 0.56
PPM1B-204ENST00000378551 ANKRD44Q8N8A2 993 aa18.58■□□□□ 0.56
PPM1B-204ENST00000378551 ZNF530Q6P9A1 599 aaPredicted RBP18.57■□□□□ 0.56
PPM1B-204ENST00000378551 ZMYND15Q9H091 742 aa18.57■□□□□ 0.56
PPM1B-204ENST00000378551 FAM173BQ6P4H8 233 aa18.57■□□□□ 0.56
PPM1B-204ENST00000378551 TRIM5Q9C035 493 aa18.57■□□□□ 0.56
PPM1B-204ENST00000378551 CCDC39Q9UFE4 941 aa18.57■□□□□ 0.56
PPM1B-204ENST00000378551 PPP1R42Q7Z4L9 355 aa18.57■□□□□ 0.56
PPM1B-204ENST00000378551 USP26Q9BXU7 913 aa18.57■□□□□ 0.56
PPM1B-204ENST00000378551 CWC22Q9HCG8 908 aaKnown RBP18.57■□□□□ 0.56
PPM1B-204ENST00000378551 CNPY2Q9Y2B0 182 aa18.57■□□□□ 0.56
PPM1B-204ENST00000378551 TTC37Q6PGP7 1564 aa18.57■□□□□ 0.56
PPM1B-204ENST00000378551 MTHFSDQ2M296 383 aaKnown RBP18.56■□□□□ 0.56
PPM1B-204ENST00000378551 PA2G4Q9UQ80 394 aaKnown RBP18.56■□□□□ 0.56
PPM1B-204ENST00000378551 RBM25P49756 843 aaKnown RBP18.56■□□□□ 0.56
PPM1B-204ENST00000378551 DCTPP1Q9H773 170 aa18.56■□□□□ 0.56
PPM1B-204ENST00000378551 PHAXQ9H814 394 aaKnown RBP18.56■□□□□ 0.56
PPM1B-204ENST00000378551 ASXL2Q76L83 1435 aa18.56■□□□□ 0.56
PPM1B-204ENST00000378551 ZBTB9Q96C00 473 aa18.56■□□□□ 0.56
PPM1B-204ENST00000378551 PLEKHF1Q96S99 279 aa18.56■□□□□ 0.56
PPM1B-204ENST00000378551 MAST1Q9Y2H9 1570 aa18.55■□□□□ 0.56
PPM1B-204ENST00000378551 MSH6P52701 1360 aa18.55■□□□□ 0.56
PPM1B-204ENST00000378551 PI4KAP2A4QPH2 592 aa18.55■□□□□ 0.56
PPM1B-204ENST00000378551 LARP1BQ659C4 914 aaKnown RBP18.55■□□□□ 0.56
PPM1B-204ENST00000378551 PI4KAP1Q8N8J0 262 aa18.55■□□□□ 0.56
PPM1B-204ENST00000378551 RUFY2Q8WXA3 655 aa18.55■□□□□ 0.56
PPM1B-204ENST00000378551 ERBB4Q15303 1308 aa18.55■□□□□ 0.56
PPM1B-204ENST00000378551 EIF2AK4Q9P2K8 1649 aaKnown RBP18.55■□□□□ 0.56
PPM1B-204ENST00000378551 GOLGA6L19H0YKK7 550 aa18.55■□□□□ 0.56
PPM1B-204ENST00000378551 GUCY1B3Q02153 619 aa18.55■□□□□ 0.56
PPM1B-204ENST00000378551 SNX21Q969T3 373 aa18.55■□□□□ 0.56
PPM1B-204ENST00000378551 ATP6V1DQ9Y5K8 247 aa18.55■□□□□ 0.56
PPM1B-204ENST00000378551 PNMA6EA0A0J9YXQ4 647 aa18.54■□□□□ 0.56
PPM1B-204ENST00000378551 ZC3H6P61129 1189 aaKnown RBP18.54■□□□□ 0.56
PPM1B-204ENST00000378551 TAF7LQ5H9L4 462 aa18.54■□□□□ 0.56
PPM1B-204ENST00000378551 ERCC6L2Q5T890 1561 aa18.54■□□□□ 0.56
PPM1B-204ENST00000378551 LRRC2Q9BYS8 371 aa18.54■□□□□ 0.56
PPM1B-204ENST00000378551 PALD1Q9ULE6 856 aa18.54■□□□□ 0.56
PPM1B-204ENST00000378551 NPC1L1Q9UHC9 1359 aa18.54■□□□□ 0.56
PPM1B-204ENST00000378551 IGSF3O75054 1194 aa18.53■□□□□ 0.56
PPM1B-204ENST00000378551 IL16Q14005 1332 aa18.53■□□□□ 0.56
PPM1B-204ENST00000378551 RAB11FIP4Q86YS3 637 aa18.52■□□□□ 0.56
PPM1B-204ENST00000378551 WDR33Q9C0J8 1336 aaKnown RBP18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms