RNA–Protein interactions for RNA: ENST00000378505.6

RPGR-203, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 4,767 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-203ENST00000378505 FYB1O15117 783 aa13.42□□□□□ -0.26
RPGR-203ENST00000378505 IGHDP01880 384 aa13.42□□□□□ -0.26
RPGR-203ENST00000378505 BMP2KLQ5H9B9 411 aa13.42□□□□□ -0.26
RPGR-203ENST00000378505 ARGLU1Q9NWB6 273 aaPredicted RBP13.42□□□□□ -0.26
RPGR-203ENST00000378505 PPP6R1Q9UPN7 881 aa13.42□□□□□ -0.26
RPGR-203ENST00000378505 TCOF1Q13428 1488 aaKnown RBP13.42□□□□□ -0.26
RPGR-203ENST00000378505 CEBPZQ03701 1054 aaKnown RBP13.41□□□□□ -0.26
RPGR-203ENST00000378505 CCDC57Q2TAC2 916 aa13.41□□□□□ -0.26
RPGR-203ENST00000378505 NUTM1Q86Y26 1132 aa13.41□□□□□ -0.26
RPGR-203ENST00000378505 ANKRD36BQ8N2N9 1353 aa13.41□□□□□ -0.26
RPGR-203ENST00000378505 ESPNB1AK53 854 aa13.41□□□□□ -0.26
RPGR-203ENST00000378505 SMARCA5O60264 1052 aaPredicted RBP13.41□□□□□ -0.26
RPGR-203ENST00000378505 ATP2B1P20020 1258 aa13.41□□□□□ -0.26
RPGR-203ENST00000378505 FMNL2Q96PY5 1086 aa13.41□□□□□ -0.26
RPGR-203ENST00000378505 TNMDQ9H2S6 317 aa13.41□□□□□ -0.26
RPGR-203ENST00000378505 RAPGEF6Q8TEU7 1601 aa13.41□□□□□ -0.26
RPGR-203ENST00000378505 FAM177BA6PVY3 158 aa13.41□□□□□ -0.26
RPGR-203ENST00000378505 PTPRCP08575 1304 aa13.41□□□□□ -0.26
RPGR-203ENST00000378505 PRDM11Q9NQV5 511 aa13.41□□□□□ -0.26
RPGR-203ENST00000378505 UNC13AQ9UPW8 1703 aa13.41□□□□□ -0.26
RPGR-203ENST00000378505 DDX54Q8TDD1 881 aaKnown RBP13.4□□□□□ -0.26
RPGR-203ENST00000378505 UPF3BQ9BZI7 483 aaKnown RBP13.4□□□□□ -0.26
RPGR-203ENST00000378505 ZNF771Q7L3S4 317 aaPredicted RBP13.4□□□□□ -0.26
RPGR-203ENST00000378505 TESK2Q96S53 571 aa13.4□□□□□ -0.26
RPGR-203ENST00000378505 CTNNA3Q9UI47 895 aa13.4□□□□□ -0.26
RPGR-203ENST00000378505 F6X3S4 739 aa13.4□□□□□ -0.26
RPGR-203ENST00000378505 ME1P48163 572 aa13.4□□□□□ -0.26
RPGR-203ENST00000378505 PLCH2O75038 1416 aa13.4□□□□□ -0.27
RPGR-203ENST00000378505 KDM5BQ9UGL1 1544 aa13.39□□□□□ -0.27
RPGR-203ENST00000378505 TEX35Q5T0J7 233 aa13.39□□□□□ -0.27
RPGR-203ENST00000378505 ZC3H6P61129 1189 aaKnown RBP13.39□□□□□ -0.27
RPGR-203ENST00000378505 AMOTQ4VCS5 1084 aa13.39□□□□□ -0.27
RPGR-203ENST00000378505 RRP12Q5JTH9 1297 aaKnown RBP13.39□□□□□ -0.27
RPGR-203ENST00000378505 LARP1Q6PKG0 1096 aaKnown RBP13.39□□□□□ -0.27
RPGR-203ENST00000378505 DENND4BO75064 1496 aaPredicted RBP13.39□□□□□ -0.27
RPGR-203ENST00000378505 SMC2O95347 1197 aa13.39□□□□□ -0.27
RPGR-203ENST00000378505 ZSCAN25Q6NSZ9 544 aa13.39□□□□□ -0.27
RPGR-203ENST00000378505 PDILTQ8N807 584 aa13.39□□□□□ -0.27
RPGR-203ENST00000378505 NACAP1Q9BZK3 213 aa13.39□□□□□ -0.27
RPGR-203ENST00000378505 CFAP45Q9UL16 551 aa13.39□□□□□ -0.27
RPGR-203ENST00000378505 ARHGAP45Q92619 1136 aa13.39□□□□□ -0.27
RPGR-203ENST00000378505 TBC1D32Q96NH3 1257 aa13.39□□□□□ -0.27
RPGR-203ENST00000378505 TTC21BQ7Z4L5 1316 aa13.38□□□□□ -0.27
RPGR-203ENST00000378505 ASXL1Q8IXJ9 1541 aa13.38□□□□□ -0.27
RPGR-203ENST00000378505 HDAC1Q13547 482 aaPredicted RBP13.38□□□□□ -0.27
RPGR-203ENST00000378505 GNL3LQ9NVN8 582 aaKnown RBP13.38□□□□□ -0.27
RPGR-203ENST00000378505 PDE4CQ08493 712 aa13.38□□□□□ -0.27
RPGR-203ENST00000378505 TRIM22Q8IYM9 498 aa13.38□□□□□ -0.27
RPGR-203ENST00000378505 SPATA32Q96LK8 384 aa13.38□□□□□ -0.27
RPGR-203ENST00000378505 AMOTL2Q9Y2J4 779 aa13.38□□□□□ -0.27
RPGR-203ENST00000378505 CASTP20810 708 aaKnown RBP13.38□□□□□ -0.27
RPGR-203ENST00000378505 FKBP4Q02790 459 aaKnown RBP eCLIP13.38□□□□□ -0.27
RPGR-203ENST00000378505 KDM4AO75164 1064 aa13.37□□□□□ -0.27
RPGR-203ENST00000378505 SLC3A2P08195 630 aaKnown RBP13.37□□□□□ -0.27
RPGR-203ENST00000378505 XPCQ01831 940 aaPredicted RBP13.37□□□□□ -0.27
RPGR-203ENST00000378505 SPC24Q8NBT2 197 aa13.37□□□□□ -0.27
RPGR-203ENST00000378505 DUOX2Q9NRD8 1548 aa13.37□□□□□ -0.27
RPGR-203ENST00000378505 FLIIQ13045 1269 aa13.37□□□□□ -0.27
RPGR-203ENST00000378505 DHX8Q14562 1220 aaKnown RBP13.37□□□□□ -0.27
RPGR-203ENST00000378505 MBIPQ9NS73 344 aa13.37□□□□□ -0.27
RPGR-203ENST00000378505 DNAAF4Q8WXU2 420 aa13.37□□□□□ -0.27
RPGR-203ENST00000378505 PHF8Q9UPP1 1060 aa13.37□□□□□ -0.27
RPGR-203ENST00000378505 PCDHB15Q9Y5E8 787 aa13.37□□□□□ -0.27
RPGR-203ENST00000378505 NUP62CLQ9H1M0 184 aa13.36□□□□□ -0.27
RPGR-203ENST00000378505 LRRFIP2Q9Y608 721 aaKnown RBP13.36□□□□□ -0.27
RPGR-203ENST00000378505 TBC1D9Q6ZT07 1266 aa13.36□□□□□ -0.27
RPGR-203ENST00000378505 TCEAL9Q9UHQ7 104 aa13.36□□□□□ -0.27
RPGR-203ENST00000378505 FILIP1LQ4L180 1135 aa13.36□□□□□ -0.27
RPGR-203ENST00000378505 MPHOSPH8Q99549 860 aa13.36□□□□□ -0.27
RPGR-203ENST00000378505 CCP110O43303 1012 aa13.36□□□□□ -0.27
RPGR-203ENST00000378505 POLR3AO14802 1390 aaPredicted RBP13.36□□□□□ -0.27
RPGR-203ENST00000378505 PUS7Q96PZ0 661 aaKnown RBP13.35□□□□□ -0.27
RPGR-203ENST00000378505 DBF4Q9UBU7 674 aaPredicted RBP13.35□□□□□ -0.27
RPGR-203ENST00000378505 TXLNAP40222 546 aa13.35□□□□□ -0.27
RPGR-203ENST00000378505 ITSN2Q9NZM3 1697 aa13.35□□□□□ -0.27
RPGR-203ENST00000378505 CDKL5O76039 1030 aa13.35□□□□□ -0.27
RPGR-203ENST00000378505 TNPO1Q92973 898 aaKnown RBP13.35□□□□□ -0.27
RPGR-203ENST00000378505 SH2B1Q9NRF2 756 aaPredicted RBP13.35□□□□□ -0.27
RPGR-203ENST00000378505 CTDP1Q9Y5B0 961 aaPredicted RBP13.35□□□□□ -0.27
RPGR-203ENST00000378505 PRPF40BQ6NWY9 871 aaKnown RBP13.34□□□□□ -0.27
RPGR-203ENST00000378505 SYCE3A1L190 88 aa13.34□□□□□ -0.27
RPGR-203ENST00000378505 PIP4K2AP48426 406 aaPredicted RBP13.34□□□□□ -0.27
RPGR-203ENST00000378505 ZSCAN30Q86W11 494 aa13.34□□□□□ -0.27
RPGR-203ENST00000378505 PER1O15534 1290 aaPredicted RBP13.34□□□□□ -0.27
RPGR-203ENST00000378505 MPNDQ8N594 471 aa13.34□□□□□ -0.27
RPGR-203ENST00000378505 ACBD3Q9H3P7 528 aa13.34□□□□□ -0.27
RPGR-203ENST00000378505 MTMR7Q9Y216 660 aa13.34□□□□□ -0.27
RPGR-203ENST00000378505 SSFA2P28290 1259 aa13.33□□□□□ -0.27
RPGR-203ENST00000378505 CCDC83Q8IWF9 413 aa13.33□□□□□ -0.27
RPGR-203ENST00000378505 USHBP1Q8N6Y0 703 aa13.33□□□□□ -0.28
RPGR-203ENST00000378505 BOLA2Q9H3K6 86 aa13.33□□□□□ -0.28
RPGR-203ENST00000378505 PLEKHH1Q9ULM0 1364 aa13.33□□□□□ -0.28
RPGR-203ENST00000378505 NUCB1Q02818 461 aa13.33□□□□□ -0.28
RPGR-203ENST00000378505 CEP57L1Q8IYX8 460 aa13.33□□□□□ -0.28
RPGR-203ENST00000378505 FAM83GA6ND36 823 aa13.33□□□□□ -0.28
RPGR-203ENST00000378505 NCBP3Q53F19 620 aaKnown RBP13.33□□□□□ -0.28
RPGR-203ENST00000378505 FERMT3Q86UX7 667 aa13.33□□□□□ -0.28
RPGR-203ENST00000378505 U3KPZ7 1027 aaPredicted RBP13.33□□□□□ -0.28
RPGR-203ENST00000378505 MAP3K11Q16584 847 aa13.32□□□□□ -0.28
RPGR-203ENST00000378505 HSP90B2PQ58FF3 399 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms