RNA–Protein interactions for RNA: ENST00000378183.8

TRIM13-203, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 1,251 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-203ENST00000378183 PPP2R1AP30153 589 aa27.78■■■□□ 2.04
TRIM13-203ENST00000378183 DEFB132Q7Z7B7 95 aa27.78■■■□□ 2.04
TRIM13-203ENST00000378183 DDX54Q8TDD1 881 aaKnown RBP27.77■■■□□ 2.04
TRIM13-203ENST00000378183 PARD3Q8TEW0 1356 aa27.76■■■□□ 2.03
TRIM13-203ENST00000378183 SF3B2Q13435 895 aaKnown RBP27.76■■■□□ 2.03
TRIM13-203ENST00000378183 ZNF316A6NFI3 1004 aaPredicted RBP27.75■■■□□ 2.03
TRIM13-203ENST00000378183 PTF1AQ7RTS3 328 aa27.75■■■□□ 2.03
TRIM13-203ENST00000378183 AEBP1Q8IUX7 1158 aa27.73■■■□□ 2.03
TRIM13-203ENST00000378183 NHSQ6T4R5 1651 aa27.72■■■□□ 2.03
TRIM13-203ENST00000378183 DIAPH1O60610 1272 aaKnown RBP27.72■■■□□ 2.03
TRIM13-203ENST00000378183 BAG6P46379 1132 aa27.7■■■□□ 2.02
TRIM13-203ENST00000378183 KAT6BQ8WYB5 2073 aa27.7■■■□□ 2.02
TRIM13-203ENST00000378183 KCNQ2O43526 872 aa27.69■■■□□ 2.02
TRIM13-203ENST00000378183 APBA3O96018 575 aa27.69■■■□□ 2.02
TRIM13-203ENST00000378183 EN1Q05925 392 aaPredicted RBP27.69■■■□□ 2.02
TRIM13-203ENST00000378183 SULT6B1Q6IMI4 303 aa27.69■■■□□ 2.02
TRIM13-203ENST00000378183 ACSBG1Q96GR2 724 aa27.69■■■□□ 2.02
TRIM13-203ENST00000378183 BCL11BQ9C0K0 894 aaPredicted RBP27.69■■■□□ 2.02
TRIM13-203ENST00000378183 KDRP35968 1356 aa27.69■■■□□ 2.02
TRIM13-203ENST00000378183 DOT1LQ8TEK3 1739 aa27.68■■■□□ 2.02
TRIM13-203ENST00000378183 CYP27B1O15528 508 aa27.68■■■□□ 2.02
TRIM13-203ENST00000378183 PCDH11XQ9BZA7 1347 aa27.67■■■□□ 2.02
TRIM13-203ENST00000378183 PCDH11YQ9BZA8 1340 aa27.67■■■□□ 2.02
TRIM13-203ENST00000378183 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.67■■■□□ 2.022e-6■■□□□ 13.2
TRIM13-203ENST00000378183 SPG7Q9UQ90 795 aa27.66■■■□□ 2.02
TRIM13-203ENST00000378183 PLEKHG2Q9H7P9 1386 aa27.65■■■□□ 2.02
TRIM13-203ENST00000378183 CAMKK2Q96RR4 588 aa27.65■■■□□ 2.02
TRIM13-203ENST00000378183 RALBP1Q15311 655 aa27.64■■■□□ 2.02
TRIM13-203ENST00000378183 EZH2Q15910 746 aaKnown RBP27.64■■■□□ 2.02
TRIM13-203ENST00000378183 CFAP53Q96M91 514 aa27.64■■■□□ 2.02
TRIM13-203ENST00000378183 BTAF1O14981 1849 aa27.64■■■□□ 2.01
TRIM13-203ENST00000378183 HMOX1P09601 288 aa27.63■■■□□ 2.01
TRIM13-203ENST00000378183 TOGARAM1Q9Y4F4 1720 aa27.62■■■□□ 2.01
TRIM13-203ENST00000378183 RGPD3A6NKT7 1758 aaPredicted RBP27.62■■■□□ 2.01
TRIM13-203ENST00000378183 RGPD4Q7Z3J3 1758 aa27.62■■■□□ 2.01
TRIM13-203ENST00000378183 RREB1Q92766 1687 aa27.61■■■□□ 2.01
TRIM13-203ENST00000378183 NKX1-1Q15270 411 aaPredicted RBP27.6■■■□□ 2.01
TRIM13-203ENST00000378183 U2SURPO15042 1029 aaKnown RBP27.59■■■□□ 2.01
TRIM13-203ENST00000378183 PLSCR1O15162 318 aa27.59■■■□□ 2.01
TRIM13-203ENST00000378183 PHKG2P15735 406 aa27.59■■■□□ 2.01
TRIM13-203ENST00000378183 PRIM1P49642 420 aaKnown RBP27.59■■■□□ 2.01
TRIM13-203ENST00000378183 PLEKHO1Q53GL0 409 aaPredicted RBP27.59■■■□□ 2.01
TRIM13-203ENST00000378183 ITGB4P16144 1822 aa27.59■■■□□ 2.01
TRIM13-203ENST00000378183 AMOTQ4VCS5 1084 aa27.57■■■□□ 2
TRIM13-203ENST00000378183 IFNL2Q8IZJ0 200 aa27.57■■■□□ 2
TRIM13-203ENST00000378183 NUP188Q5SRE5 1749 aa27.56■■■□□ 2
TRIM13-203ENST00000378183 SYTL4Q96C24 671 aaPredicted RBP27.54■■■□□ 2
TRIM13-203ENST00000378183 PRKRIP1Q9H875 184 aaPredicted RBP27.54■■■□□ 2
TRIM13-203ENST00000378183 MYBBP1AQ9BQG0 1328 aaKnown RBP27.53■■■□□ 2
TRIM13-203ENST00000378183 ZNF530Q6P9A1 599 aaPredicted RBP27.53■■■□□ 2
TRIM13-203ENST00000378183 PROM2Q8N271 834 aa27.53■■■□□ 2
TRIM13-203ENST00000378183 NUDCQ9Y266 331 aa27.53■■■□□ 2
TRIM13-203ENST00000378183 RSPH6AQ9H0K4 717 aa27.5■■□□□ 1.99
TRIM13-203ENST00000378183 U2AF1L5P0DN76 240 aaPredicted RBP27.49■■□□□ 1.99
TRIM13-203ENST00000378183 U2AF1Q01081 240 aaKnown RBP eCLIP27.49■■□□□ 1.99
TRIM13-203ENST00000378183 VIRMAQ69YN4 1812 aaKnown RBP27.48■■□□□ 1.99
TRIM13-203ENST00000378183 MTHFSDQ2M296 383 aaKnown RBP27.48■■□□□ 1.99
TRIM13-203ENST00000378183 KDM6AO15550 1401 aaPredicted RBP27.48■■□□□ 1.99
TRIM13-203ENST00000378183 LY75O60449 1722 aa27.47■■□□□ 1.99
TRIM13-203ENST00000378183 TXNRD1Q16881 649 aa27.47■■□□□ 1.99
TRIM13-203ENST00000378183 MPRIPQ6WCQ1 1025 aa27.47■■□□□ 1.99
TRIM13-203ENST00000378183 SCN11AQ9UI33 1791 aa27.46■■□□□ 1.99
TRIM13-203ENST00000378183 C1orf141Q5JVX7 400 aa27.46■■□□□ 1.99
TRIM13-203ENST00000378183 HSP90AB1P08238 724 aaKnown RBP27.45■■□□□ 1.98
TRIM13-203ENST00000378183 PRKAR2BP31323 418 aa27.45■■□□□ 1.98
TRIM13-203ENST00000378183 DCAF5Q96JK2 942 aa27.45■■□□□ 1.98
TRIM13-203ENST00000378183 AKAP4Q5JQC9 854 aa27.44■■□□□ 1.98
TRIM13-203ENST00000378183 PIGBQ92521 554 aa27.44■■□□□ 1.98
TRIM13-203ENST00000378183 PHACTR3Q96KR7 559 aa27.44■■□□□ 1.98
TRIM13-203ENST00000378183 FCHSD2O94868 740 aa27.43■■□□□ 1.98
TRIM13-203ENST00000378183 ADAMTS7Q9UKP4 1686 aa27.41■■□□□ 1.98
TRIM13-203ENST00000378183 ERVV-2B6SEH9 535 aa27.41■■□□□ 1.98
TRIM13-203ENST00000378183 LRRC4BQ9NT99 713 aa27.4■■□□□ 1.98
TRIM13-203ENST00000378183 TMOD3Q9NYL9 352 aa27.4■■□□□ 1.98
TRIM13-203ENST00000378183 LGR6Q9HBX8 967 aa27.39■■□□□ 1.98
TRIM13-203ENST00000378183 PAPPAQ13219 1627 aa27.38■■□□□ 1.97
TRIM13-203ENST00000378183 PSDA5PKW4 1024 aaPredicted RBP27.37■■□□□ 1.97
TRIM13-203ENST00000378183 GAS2L2Q8NHY3 880 aa27.37■■□□□ 1.97
TRIM13-203ENST00000378183 ANO8Q9HCE9 1232 aaPredicted RBP27.37■■□□□ 1.97
TRIM13-203ENST00000378183 RNMTO43148 476 aaKnown RBP27.36■■□□□ 1.97
TRIM13-203ENST00000378183 KCNQ4P56696 695 aa27.36■■□□□ 1.97
TRIM13-203ENST00000378183 R3HDM1Q15032 1099 aaKnown RBP27.36■■□□□ 1.97
TRIM13-203ENST00000378183 PLEKHF1Q96S99 279 aa27.36■■□□□ 1.97
TRIM13-203ENST00000378183 PALLDQ8WX93 1383 aa27.35■■□□□ 1.97
TRIM13-203ENST00000378183 CABP4P57796 275 aa27.35■■□□□ 1.97
TRIM13-203ENST00000378183 NBPF14Q5TI25 921 aa27.35■■□□□ 1.97
TRIM13-203ENST00000378183 ASAP1Q9ULH1 1129 aa27.35■■□□□ 1.97
TRIM13-203ENST00000378183 SLC27A3Q5K4L6 730 aa27.34■■□□□ 1.97
TRIM13-203ENST00000378183 ATG3Q9NT62 314 aa27.34■■□□□ 1.97
TRIM13-203ENST00000378183 MAP3K5Q99683 1374 aa27.34■■□□□ 1.97
TRIM13-203ENST00000378183 MRC1P22897 1456 aa27.33■■□□□ 1.97
TRIM13-203ENST00000378183 NFATC2IPQ8NCF5 419 aa27.33■■□□□ 1.97
TRIM13-203ENST00000378183 TAF1LQ8IZX4 1826 aa27.32■■□□□ 1.96
TRIM13-203ENST00000378183 GNAT3A8MTJ3 354 aa27.32■■□□□ 1.96
TRIM13-203ENST00000378183 SMARCC1Q92922 1105 aaPredicted RBP27.32■■□□□ 1.96
TRIM13-203ENST00000378183 CCNL1Q9UK58 526 aaPredicted RBP27.32■■□□□ 1.96
TRIM13-203ENST00000378183 DLG5Q8TDM6 1919 aa27.31■■□□□ 1.96
TRIM13-203ENST00000378183 CCDC184Q52MB2 194 aa27.31■■□□□ 1.96
TRIM13-203ENST00000378183 IL17REQ8NFR9 667 aa27.31■■□□□ 1.96
TRIM13-203ENST00000378183 ANP32CO43423 234 aa27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms