RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 ZBED9Q6R2W3 1325 aa16.6■□□□□ 0.25
TRIM13-202ENST00000378182 C6orf229H3BNL8 230 aa16.6■□□□□ 0.25
TRIM13-202ENST00000378182 CEP126Q9P2H0 1117 aa16.6■□□□□ 0.25
TRIM13-202ENST00000378182 COMMD10Q9Y6G5 202 aa16.6■□□□□ 0.25
TRIM13-202ENST00000378182 TNNT1P13805 278 aa16.6■□□□□ 0.25
TRIM13-202ENST00000378182 CCDC82Q8N4S0 544 aa16.6■□□□□ 0.25
TRIM13-202ENST00000378182 RAD54L2Q9Y4B4 1467 aa16.6■□□□□ 0.25
TRIM13-202ENST00000378182 IL1RAPL2Q9NP60 686 aa16.6■□□□□ 0.25
TRIM13-202ENST00000378182 SRGAP3O43295 1099 aa16.59■□□□□ 0.25
TRIM13-202ENST00000378182 TNMDQ9H2S6 317 aa16.59■□□□□ 0.25
TRIM13-202ENST00000378182 LUC7LQ9NQ29 371 aaKnown RBP16.59■□□□□ 0.25
TRIM13-202ENST00000378182 TOP2AP11388 1531 aaKnown RBP16.59■□□□□ 0.25
TRIM13-202ENST00000378182 CCDC112Q8NEF3 446 aa16.59■□□□□ 0.25
TRIM13-202ENST00000378182 DDX11Q96FC9 970 aa16.59■□□□□ 0.25
TRIM13-202ENST00000378182 FEZ1Q99689 392 aa16.59■□□□□ 0.25
TRIM13-202ENST00000378182 JMYQ8N9B5 988 aa16.58■□□□□ 0.25
TRIM13-202ENST00000378182 AQRO60306 1485 aaKnown RBP eCLIP16.58■□□□□ 0.256e-15■■■■■ 98.7
TRIM13-202ENST00000378182 KIAA1328Q86T90 577 aa16.58■□□□□ 0.24
TRIM13-202ENST00000378182 RTEL1-TNFRSF6BF6WH68 1400 aa16.58■□□□□ 0.24
TRIM13-202ENST00000378182 RRBP1Q9P2E9 1410 aaKnown RBP16.58■□□□□ 0.24
TRIM13-202ENST00000378182 PIP4K2AP48426 406 aaPredicted RBP16.58■□□□□ 0.24
TRIM13-202ENST00000378182 HSP90AB3PQ58FF7 597 aa16.58■□□□□ 0.24
TRIM13-202ENST00000378182 MYD88Q99836 296 aa16.58■□□□□ 0.24
TRIM13-202ENST00000378182 DNAI2Q9GZS0 605 aa16.58■□□□□ 0.24
TRIM13-202ENST00000378182 CCDC39Q9UFE4 941 aa16.58■□□□□ 0.24
TRIM13-202ENST00000378182 SRCIN1Q9C0H9 1055 aa16.58■□□□□ 0.24
TRIM13-202ENST00000378182 POTEJP0CG39 1038 aa16.58■□□□□ 0.24
TRIM13-202ENST00000378182 SLC12A5Q9H2X9 1139 aa16.58■□□□□ 0.24
TRIM13-202ENST00000378182 RAPGEF3O95398 923 aa16.57■□□□□ 0.24
TRIM13-202ENST00000378182 DACH1Q9UI36 760 aa16.57■□□□□ 0.24
TRIM13-202ENST00000378182 NUTM1Q86Y26 1132 aa16.57■□□□□ 0.24
TRIM13-202ENST00000378182 CUL5Q93034 780 aa16.57■□□□□ 0.24
TRIM13-202ENST00000378182 FYCO1Q9BQS8 1478 aa16.57■□□□□ 0.24
TRIM13-202ENST00000378182 RANBP6O60518 1105 aaKnown RBP16.57■□□□□ 0.24
TRIM13-202ENST00000378182 GPTP24298 496 aa16.57■□□□□ 0.24
TRIM13-202ENST00000378182 VAT1LQ9HCJ6 419 aa16.57■□□□□ 0.24
TRIM13-202ENST00000378182 LETM1O95202 739 aaPredicted RBP16.56■□□□□ 0.24
TRIM13-202ENST00000378182 CTNNBL1Q8WYA6 563 aaPredicted RBP16.56■□□□□ 0.24
TRIM13-202ENST00000378182 JAKMIP1Q96N16 626 aaKnown RBP16.56■□□□□ 0.24
TRIM13-202ENST00000378182 EZRP15311 586 aaKnown RBP16.56■□□□□ 0.24
TRIM13-202ENST00000378182 EIF5P55010 431 aaKnown RBP16.56■□□□□ 0.24
TRIM13-202ENST00000378182 ZNF444Q8N0Y2 327 aaPredicted RBP16.56■□□□□ 0.24
TRIM13-202ENST00000378182 CCT4P50991 539 aaKnown RBP16.56■□□□□ 0.24
TRIM13-202ENST00000378182 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.56■□□□□ 0.24
TRIM13-202ENST00000378182 CCDC150Q8NCX0 1101 aa16.56■□□□□ 0.24
TRIM13-202ENST00000378182 PDCP20941 246 aa16.56■□□□□ 0.24
TRIM13-202ENST00000378182 MAP3K9P80192 1104 aa16.56■□□□□ 0.24
TRIM13-202ENST00000378182 DNA2P51530 1060 aa16.55■□□□□ 0.24
TRIM13-202ENST00000378182 FERMT2Q96AC1 680 aa16.55■□□□□ 0.24
TRIM13-202ENST00000378182 LARP1BQ659C4 914 aaKnown RBP16.55■□□□□ 0.24
TRIM13-202ENST00000378182 FAM43AQ8N2R8 423 aa16.55■□□□□ 0.24
TRIM13-202ENST00000378182 ZNF354CQ86Y25 554 aa16.55■□□□□ 0.24
TRIM13-202ENST00000378182 PNISRQ8TF01 805 aaKnown RBP16.55■□□□□ 0.24
TRIM13-202ENST00000378182 CDCA7LQ96GN5 454 aa16.55■□□□□ 0.24
TRIM13-202ENST00000378182 CCDC113Q9H0I3 377 aa16.55■□□□□ 0.24
TRIM13-202ENST00000378182 SAMM50Q9Y512 469 aa16.54■□□□□ 0.24
TRIM13-202ENST00000378182 KIF7Q2M1P5 1343 aa16.54■□□□□ 0.24
TRIM13-202ENST00000378182 MACROD2A1Z1Q3 448 aa16.54■□□□□ 0.24
TRIM13-202ENST00000378182 ANKRD1Q15327 319 aa16.54■□□□□ 0.24
TRIM13-202ENST00000378182 PDRG1Q9NUG6 133 aa16.54■□□□□ 0.24
TRIM13-202ENST00000378182 IMMTQ16891 758 aaKnown RBP16.54■□□□□ 0.24
TRIM13-202ENST00000378182 GOPCQ9HD26 462 aa16.54■□□□□ 0.24
TRIM13-202ENST00000378182 PDZRN3Q9UPQ7 1066 aa16.54■□□□□ 0.24
TRIM13-202ENST00000378182 CDKL5O76039 1030 aa16.54■□□□□ 0.24
TRIM13-202ENST00000378182 RSPH6AQ9H0K4 717 aa16.54■□□□□ 0.24
TRIM13-202ENST00000378182 JAKMIP3Q5VZ66 844 aa16.53■□□□□ 0.24
TRIM13-202ENST00000378182 MYOM3Q5VTT5 1437 aa16.53■□□□□ 0.24
TRIM13-202ENST00000378182 GNAT3A8MTJ3 354 aa16.53■□□□□ 0.24
TRIM13-202ENST00000378182 PUF60Q9UHX1 559 aaKnown RBP16.53■□□□□ 0.24
TRIM13-202ENST00000378182 KLHL10Q6JEL2 608 aa16.52■□□□□ 0.24
TRIM13-202ENST00000378182 ZNF287Q9HBT7 754 aa16.52■□□□□ 0.24
TRIM13-202ENST00000378182 CCDC144CPQ8IYA2 1237 aa16.52■□□□□ 0.24
TRIM13-202ENST00000378182 RFC4P35249 363 aa16.52■□□□□ 0.24
TRIM13-202ENST00000378182 GUCY1B3Q02153 619 aa16.52■□□□□ 0.24
TRIM13-202ENST00000378182 BLOC1S2Q6QNY1 142 aa16.52■□□□□ 0.24
TRIM13-202ENST00000378182 MMRN2Q9H8L6 949 aa16.52■□□□□ 0.23
TRIM13-202ENST00000378182 TRMT112Q9UI30 125 aaKnown RBP16.52■□□□□ 0.23
TRIM13-202ENST00000378182 SPTY2D1Q68D10 685 aaPredicted RBP16.52■□□□□ 0.23
TRIM13-202ENST00000378182 PPP1R12BO60237 982 aaPredicted RBP16.51■□□□□ 0.23
TRIM13-202ENST00000378182 F8W031 263 aaPredicted RBP16.51■□□□□ 0.23
TRIM13-202ENST00000378182 ZNF692Q9BU19 519 aaPredicted RBP16.51■□□□□ 0.23
TRIM13-202ENST00000378182 TMX1Q9H3N1 280 aa16.51■□□□□ 0.23
TRIM13-202ENST00000378182 RUSC2Q8N2Y8 1516 aa16.51■□□□□ 0.23
TRIM13-202ENST00000378182 MRPS9P82933 396 aaKnown RBP16.51■□□□□ 0.23
TRIM13-202ENST00000378182 ACSBG1Q96GR2 724 aa16.51■□□□□ 0.23
TRIM13-202ENST00000378182 CCP110O43303 1012 aa16.51■□□□□ 0.23
TRIM13-202ENST00000378182 LEKR1Q6ZMV7 388 aa16.51■□□□□ 0.23
TRIM13-202ENST00000378182 CASTP20810 708 aaKnown RBP16.5■□□□□ 0.23
TRIM13-202ENST00000378182 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.5■□□□□ 0.23
TRIM13-202ENST00000378182 HOMER2Q9NSB8 354 aa16.5■□□□□ 0.23
TRIM13-202ENST00000378182 PLS1Q14651 629 aa16.5■□□□□ 0.23
TRIM13-202ENST00000378182 PUS7Q96PZ0 661 aaKnown RBP16.5■□□□□ 0.23
TRIM13-202ENST00000378182 CAMK4Q16566 473 aa16.5■□□□□ 0.23
TRIM13-202ENST00000378182 SPATA32Q96LK8 384 aa16.5■□□□□ 0.23
TRIM13-202ENST00000378182 MCM10Q7L590 875 aa16.5■□□□□ 0.23
TRIM13-202ENST00000378182 IFIT1P09914 478 aaKnown RBP16.49■□□□□ 0.23
TRIM13-202ENST00000378182 PPP2R1AP30153 589 aa16.49■□□□□ 0.23
TRIM13-202ENST00000378182 BOLA2Q9H3K6 86 aa16.49■□□□□ 0.23
TRIM13-202ENST00000378182 ZNF397Q8NF99 534 aaPredicted RBP16.49■□□□□ 0.23
TRIM13-202ENST00000378182 NAPBQ9H115 298 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms