RNA–Protein interactions for RNA: ENST00000377625.6

TBC1D4-201, Transcript of TBC1 domain family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TBC1D4, Length 6,182 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4-201ENST00000377625 TSPYL1Q9H0U9 437 aa22.39■■□□□ 1.18
TBC1D4-201ENST00000377625 CFAP45Q9UL16 551 aa22.39■■□□□ 1.18
TBC1D4-201ENST00000377625 ATAD2Q6PL18 1390 aa22.39■■□□□ 1.18
TBC1D4-201ENST00000377625 XPCQ01831 940 aaPredicted RBP22.39■■□□□ 1.17
TBC1D4-201ENST00000377625 CCDC85AQ96PX6 553 aaPredicted RBP22.39■■□□□ 1.17
TBC1D4-201ENST00000377625 IGHMBP2P38935 993 aaKnown RBP22.39■■□□□ 1.17
TBC1D4-201ENST00000377625 GOLGA6L10A6NI86 522 aa22.38■■□□□ 1.17
TBC1D4-201ENST00000377625 IDH1O75874 414 aaKnown RBP22.38■■□□□ 1.17
TBC1D4-201ENST00000377625 RPAP2Q8IXW5 612 aaPredicted RBP22.38■■□□□ 1.17
TBC1D4-201ENST00000377625 MPNDQ8N594 471 aa22.38■■□□□ 1.17
TBC1D4-201ENST00000377625 BACH2Q9BYV9 841 aa22.37■■□□□ 1.17
TBC1D4-201ENST00000377625 PPP6R1Q9UPN7 881 aa22.37■■□□□ 1.17
TBC1D4-201ENST00000377625 RPGRIP1LQ68CZ1 1315 aa22.37■■□□□ 1.17
TBC1D4-201ENST00000377625 LEKR1Q6ZMV7 388 aa22.37■■□□□ 1.17
TBC1D4-201ENST00000377625 FAM177A1Q8N128 213 aaPredicted RBP22.37■■□□□ 1.17
TBC1D4-201ENST00000377625 ZNF76P36508 570 aa22.36■■□□□ 1.17
TBC1D4-201ENST00000377625 PIBF1Q8WXW3 757 aa22.36■■□□□ 1.17
TBC1D4-201ENST00000377625 GNAT3A8MTJ3 354 aa22.36■■□□□ 1.17
TBC1D4-201ENST00000377625 NFE2L2Q16236 605 aa22.36■■□□□ 1.17
TBC1D4-201ENST00000377625 AIDAQ96BJ3 306 aa22.36■■□□□ 1.17
TBC1D4-201ENST00000377625 SEPT11Q9NVA2 429 aaKnown RBP22.36■■□□□ 1.17
TBC1D4-201ENST00000377625 ZC3H6P61129 1189 aaKnown RBP22.36■■□□□ 1.17
TBC1D4-201ENST00000377625 CEP57L1Q8IYX8 460 aa22.36■■□□□ 1.17
TBC1D4-201ENST00000377625 WASF1Q92558 559 aa22.36■■□□□ 1.17
TBC1D4-201ENST00000377625 ANKRD30BQ9BXX2 1392 aa22.36■■□□□ 1.17
TBC1D4-201ENST00000377625 SEPT7Q16181 437 aaKnown RBP22.35■■□□□ 1.17
TBC1D4-201ENST00000377625 CCDC112Q8NEF3 446 aa22.35■■□□□ 1.17
TBC1D4-201ENST00000377625 IMMTQ16891 758 aaKnown RBP22.35■■□□□ 1.17
TBC1D4-201ENST00000377625 NUTM1Q86Y26 1132 aa22.35■■□□□ 1.17
TBC1D4-201ENST00000377625 MPHOSPH10O00566 681 aaKnown RBP22.35■■□□□ 1.17
TBC1D4-201ENST00000377625 ZRSR2Q15696 482 aaKnown RBP22.35■■□□□ 1.17
TBC1D4-201ENST00000377625 NUP62CLQ9H1M0 184 aa22.35■■□□□ 1.17
TBC1D4-201ENST00000377625 BRPF3Q9ULD4 1205 aa22.34■■□□□ 1.17
TBC1D4-201ENST00000377625 STARD3NLO95772 234 aa22.34■■□□□ 1.17
TBC1D4-201ENST00000377625 ANKRD62A6NC57 917 aa22.33■■□□□ 1.17
TBC1D4-201ENST00000377625 RAPGEF3O95398 923 aa22.33■■□□□ 1.17
TBC1D4-201ENST00000377625 USP5P45974 858 aa22.33■■□□□ 1.17
TBC1D4-201ENST00000377625 ABCF2Q9UG63 623 aa22.33■■□□□ 1.17
TBC1D4-201ENST00000377625 CALRP27797 417 aaKnown RBP22.33■■□□□ 1.16
TBC1D4-201ENST00000377625 CCDC66A2RUB6 948 aa22.33■■□□□ 1.16
TBC1D4-201ENST00000377625 UPF3BQ9BZI7 483 aaKnown RBP22.32■■□□□ 1.16
TBC1D4-201ENST00000377625 CASTP20810 708 aaKnown RBP22.32■■□□□ 1.16
TBC1D4-201ENST00000377625 METTL24Q5JXM2 366 aa22.32■■□□□ 1.16
TBC1D4-201ENST00000377625 GRPEL1Q9HAV7 217 aa22.32■■□□□ 1.16
TBC1D4-201ENST00000377625 ERICH3Q5RHP9 1530 aa22.32■■□□□ 1.16
TBC1D4-201ENST00000377625 EHBP1L1Q8N3D4 1523 aa22.32■■□□□ 1.16
TBC1D4-201ENST00000377625 TMPOP42166 694 aaKnown RBP22.32■■□□□ 1.16
TBC1D4-201ENST00000377625 PIP4K2BP78356 416 aa22.32■■□□□ 1.16
TBC1D4-201ENST00000377625 ANKRD18AQ8IVF6 992 aa22.32■■□□□ 1.16
TBC1D4-201ENST00000377625 TMEM57Q8N5G2 664 aa22.32■■□□□ 1.16
TBC1D4-201ENST00000377625 EXOC6BQ9Y2D4 811 aa22.32■■□□□ 1.16
TBC1D4-201ENST00000377625 NUDT16Q96DE0 195 aaKnown RBP22.31■■□□□ 1.16
TBC1D4-201ENST00000377625 MIS18AQ9NYP9 233 aa22.31■■□□□ 1.16
TBC1D4-201ENST00000377625 ARAP1Q96P48 1450 aa22.31■■□□□ 1.16
TBC1D4-201ENST00000377625 DDX11Q96FC9 970 aa22.31■■□□□ 1.16
TBC1D4-201ENST00000377625 MATR3P43243 847 aaKnown RBP eCLIP22.31■■□□□ 1.164e-7■■■□□ 16.1
TBC1D4-201ENST00000377625 ERLIN1O75477 346 aa22.3■■□□□ 1.16
TBC1D4-201ENST00000377625 RBM10P98175 930 aaKnown RBP22.3■■□□□ 1.16
TBC1D4-201ENST00000377625 KCNH5Q8NCM2 988 aa22.3■■□□□ 1.16
TBC1D4-201ENST00000377625 NSD3Q9BZ95 1437 aa22.29■■□□□ 1.16
TBC1D4-201ENST00000377625 CIZ1Q9ULV3 898 aaPredicted RBP22.29■■□□□ 1.16
TBC1D4-201ENST00000377625 DUSP27Q5VZP5 1158 aa22.29■■□□□ 1.16
TBC1D4-201ENST00000377625 TMOD2Q9NZR1 351 aa22.29■■□□□ 1.16
TBC1D4-201ENST00000377625 SMTNL1A8MU46 457 aa22.29■■□□□ 1.16
TBC1D4-201ENST00000377625 CCDC61Q9Y6R9 512 aa22.29■■□□□ 1.16
TBC1D4-201ENST00000377625 EIF5P55010 431 aaKnown RBP22.28■■□□□ 1.16
TBC1D4-201ENST00000377625 ENOX2Q16206 610 aaKnown RBP22.28■■□□□ 1.16
TBC1D4-201ENST00000377625 KIF1BPQ96EK5 621 aa22.28■■□□□ 1.16
TBC1D4-201ENST00000377625 CENPHQ9H3R5 247 aa22.28■■□□□ 1.16
TBC1D4-201ENST00000377625 CEP131Q9UPN4 1083 aa22.28■■□□□ 1.16
TBC1D4-201ENST00000377625 FILIP1Q7Z7B0 1213 aa22.28■■□□□ 1.16
TBC1D4-201ENST00000377625 AKAP2Q9Y2D5 859 aa22.28■■□□□ 1.16
TBC1D4-201ENST00000377625 MCM10Q7L590 875 aa22.27■■□□□ 1.16
TBC1D4-201ENST00000377625 TROQ12816 1431 aaPredicted RBP22.27■■□□□ 1.16
TBC1D4-201ENST00000377625 PDIA4P13667 645 aaKnown RBP22.27■■□□□ 1.16
TBC1D4-201ENST00000377625 PTCD1O75127 700 aaKnown RBP22.27■■□□□ 1.16
TBC1D4-201ENST00000377625 IQCEQ6IPM2 695 aa22.26■■□□□ 1.15
TBC1D4-201ENST00000377625 U3KPZ7 1027 aaPredicted RBP22.26■■□□□ 1.15
TBC1D4-201ENST00000377625 TAX1BP1Q86VP1 789 aa22.26■■□□□ 1.15
TBC1D4-201ENST00000377625 SLFN5Q08AF3 891 aa22.26■■□□□ 1.15
TBC1D4-201ENST00000377625 MX1P20591 662 aa22.26■■□□□ 1.15
TBC1D4-201ENST00000377625 THUMPD2Q9BTF0 503 aaKnown RBP22.26■■□□□ 1.15
TBC1D4-201ENST00000377625 ZNF287Q9HBT7 754 aa22.26■■□□□ 1.15
TBC1D4-201ENST00000377625 POGZQ7Z3K3 1410 aa22.26■■□□□ 1.15
TBC1D4-201ENST00000377625 ZNF652Q9Y2D9 606 aa22.25■■□□□ 1.15
TBC1D4-201ENST00000377625 GLRX3O76003 335 aaKnown RBP22.25■■□□□ 1.15
TBC1D4-201ENST00000377625 LRRFIP2Q9Y608 721 aaKnown RBP22.25■■□□□ 1.15
TBC1D4-201ENST00000377625 EIF3JO75822 258 aaKnown RBP22.25■■□□□ 1.15
TBC1D4-201ENST00000377625 DESP17661 470 aa22.25■■□□□ 1.15
TBC1D4-201ENST00000377625 EPB41L2O43491 1005 aaKnown RBP22.25■■□□□ 1.15
TBC1D4-201ENST00000377625 RAB11FIP3O75154 756 aa22.25■■□□□ 1.15
TBC1D4-201ENST00000377625 LARP1Q6PKG0 1096 aaKnown RBP22.25■■□□□ 1.15
TBC1D4-201ENST00000377625 NCAPD3P42695 1498 aa22.25■■□□□ 1.15
TBC1D4-201ENST00000377625 TMOD3Q9NYL9 352 aa22.24■■□□□ 1.15
TBC1D4-201ENST00000377625 CAVIN4Q5BKX8 364 aa22.24■■□□□ 1.15
TBC1D4-201ENST00000377625 KIAA1328Q86T90 577 aa22.24■■□□□ 1.15
TBC1D4-201ENST00000377625 SEC63Q9UGP8 760 aaKnown RBP22.24■■□□□ 1.15
TBC1D4-201ENST00000377625 KIAA0754O94854 1291 aa22.24■■□□□ 1.15
TBC1D4-201ENST00000377625 MAP3K11Q16584 847 aa22.24■■□□□ 1.15
TBC1D4-201ENST00000377625 MCM4P33991 863 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms