RNA–Protein interactions for RNA: ENST00000376188.1

PPP1R3F-202, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 2 BASIC

Gene PPP1R3F, Length 2,443 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-202ENST00000376188 TBC1D32Q96NH3 1257 aa23.73■■□□□ 1.39
PPP1R3F-202ENST00000376188 BECN1Q14457 450 aa23.72■■□□□ 1.39
PPP1R3F-202ENST00000376188 CHD1LQ86WJ1 897 aa23.72■■□□□ 1.39
PPP1R3F-202ENST00000376188 ABTB2Q8N961 1025 aa23.72■■□□□ 1.39
PPP1R3F-202ENST00000376188 LTN1O94822 1766 aa23.71■■□□□ 1.39
PPP1R3F-202ENST00000376188 HOXC9P31274 260 aa23.71■■□□□ 1.39
PPP1R3F-202ENST00000376188 LRRC37A3O60309 1634 aa23.71■■□□□ 1.39
PPP1R3F-202ENST00000376188 RTL1A6NKG5 1358 aa23.71■■□□□ 1.39
PPP1R3F-202ENST00000376188 PHF8Q9UPP1 1060 aa23.71■■□□□ 1.39
PPP1R3F-202ENST00000376188 PTPRCP08575 1304 aa23.7■■□□□ 1.38
PPP1R3F-202ENST00000376188 HTATSF1O43719 755 aaKnown RBP23.7■■□□□ 1.38
PPP1R3F-202ENST00000376188 INTS3Q68E01 1043 aaKnown RBP23.7■■□□□ 1.38
PPP1R3F-202ENST00000376188 ADGRL3Q9HAR2 1447 aa23.7■■□□□ 1.38
PPP1R3F-202ENST00000376188 NWD1Q149M9 1564 aa23.69■■□□□ 1.38
PPP1R3F-202ENST00000376188 RGS12O14924 1447 aa23.69■■□□□ 1.38
PPP1R3F-202ENST00000376188 DEKP35659 375 aaKnown RBP23.69■■□□□ 1.38
PPP1R3F-202ENST00000376188 KRT24Q2M2I5 525 aa23.69■■□□□ 1.38
PPP1R3F-202ENST00000376188 LNPKQ9C0E8 428 aa23.69■■□□□ 1.38
PPP1R3F-202ENST00000376188 C1orf115Q9H7X2 142 aa23.69■■□□□ 1.38
PPP1R3F-202ENST00000376188 FOXO3O43524 673 aa23.68■■□□□ 1.38
PPP1R3F-202ENST00000376188 NUTM2GQ5VZR2 741 aa23.67■■□□□ 1.38
PPP1R3F-202ENST00000376188 TSPYL4Q9UJ04 414 aa23.67■■□□□ 1.38
PPP1R3F-202ENST00000376188 CACNA1FO60840 1977 aa23.65■■□□□ 1.38
PPP1R3F-202ENST00000376188 SIRT2Q8IXJ6 389 aa23.65■■□□□ 1.38
PPP1R3F-202ENST00000376188 ANKRD45Q5TZF3 282 aa23.64■■□□□ 1.38
PPP1R3F-202ENST00000376188 NPHP4O75161 1426 aaPredicted RBP23.63■■□□□ 1.37
PPP1R3F-202ENST00000376188 BMP2KLQ5H9B9 411 aa23.63■■□□□ 1.37
PPP1R3F-202ENST00000376188 NFAT5O94916 1531 aa23.62■■□□□ 1.37
PPP1R3F-202ENST00000376188 GNAT3A8MTJ3 354 aa23.62■■□□□ 1.37
PPP1R3F-202ENST00000376188 C14orf37Q86TY3 774 aa23.62■■□□□ 1.37
PPP1R3F-202ENST00000376188 PHRF1Q9P1Y6 1649 aaKnown RBP23.61■■□□□ 1.37
PPP1R3F-202ENST00000376188 NFKBIBQ15653 356 aa23.61■■□□□ 1.37
PPP1R3F-202ENST00000376188 C22orf23Q9BZE7 217 aa23.61■■□□□ 1.37
PPP1R3F-202ENST00000376188 MAP3K5Q99683 1374 aa23.61■■□□□ 1.37
PPP1R3F-202ENST00000376188 SLC4A2P04920 1241 aa23.6■■□□□ 1.37
PPP1R3F-202ENST00000376188 MFAP1P55081 439 aaKnown RBP23.6■■□□□ 1.37
PPP1R3F-202ENST00000376188 MIS18AQ9NYP9 233 aa23.6■■□□□ 1.37
PPP1R3F-202ENST00000376188 FAM208AQ9UK61 1670 aaKnown RBP23.6■■□□□ 1.37
PPP1R3F-202ENST00000376188 ATP10DQ9P241 1426 aa23.59■■□□□ 1.37
PPP1R3F-202ENST00000376188 MSH6P52701 1360 aa23.59■■□□□ 1.37
PPP1R3F-202ENST00000376188 SOS1Q07889 1333 aaPredicted RBP23.59■■□□□ 1.37
PPP1R3F-202ENST00000376188 RPAP2Q8IXW5 612 aaPredicted RBP23.59■■□□□ 1.37
PPP1R3F-202ENST00000376188 BABAM1Q9NWV8 329 aa23.59■■□□□ 1.37
PPP1R3F-202ENST00000376188 IP6K1Q92551 441 aa23.58■■□□□ 1.37
PPP1R3F-202ENST00000376188 PSME1Q06323 249 aa23.58■■□□□ 1.36
PPP1R3F-202ENST00000376188 ESCO1Q5FWF5 840 aa23.58■■□□□ 1.36
PPP1R3F-202ENST00000376188 ANKRD44Q8N8A2 993 aa23.58■■□□□ 1.36
PPP1R3F-202ENST00000376188 KCNH5Q8NCM2 988 aa23.58■■□□□ 1.36
PPP1R3F-202ENST00000376188 DCTPP1Q9H773 170 aa23.58■■□□□ 1.36
PPP1R3F-202ENST00000376188 LTV1Q96GA3 475 aaPredicted RBP23.57■■□□□ 1.36
PPP1R3F-202ENST00000376188 STK31Q9BXU1 1019 aa23.55■■□□□ 1.36
PPP1R3F-202ENST00000376188 RBM33Q96EV2 1170 aaKnown RBP23.55■■□□□ 1.36
PPP1R3F-202ENST00000376188 CCT4P50991 539 aaKnown RBP23.54■■□□□ 1.36
PPP1R3F-202ENST00000376188 TBC1D2Q9BYX2 928 aa23.54■■□□□ 1.36
PPP1R3F-202ENST00000376188 CEP85Q6P2H3 762 aa23.53■■□□□ 1.36
PPP1R3F-202ENST00000376188 N4BP2Q86UW6 1770 aaPredicted RBP23.52■■□□□ 1.36
PPP1R3F-202ENST00000376188 CCDC30Q5VVM6 783 aa23.52■■□□□ 1.36
PPP1R3F-202ENST00000376188 TAF7Q15545 349 aaPredicted RBP23.52■■□□□ 1.36
PPP1R3F-202ENST00000376188 IL17REQ8NFR9 667 aa23.52■■□□□ 1.36
PPP1R3F-202ENST00000376188 MEIS3Q99687 375 aa23.51■■□□□ 1.35
PPP1R3F-202ENST00000376188 RGPD2P0DJD1 1756 aa23.5■■□□□ 1.35
PPP1R3F-202ENST00000376188 RBM25P49756 843 aaKnown RBP23.5■■□□□ 1.35
PPP1R3F-202ENST00000376188 SLIT3O75094 1523 aa23.5■■□□□ 1.35
PPP1R3F-202ENST00000376188 G2E3Q7L622 706 aa23.5■■□□□ 1.35
PPP1R3F-202ENST00000376188 KIF1AQ12756 1690 aa23.49■■□□□ 1.35
PPP1R3F-202ENST00000376188 EIF5BO60841 1220 aaKnown RBP23.48■■□□□ 1.35
PPP1R3F-202ENST00000376188 USHBP1Q8N6Y0 703 aa23.48■■□□□ 1.35
PPP1R3F-202ENST00000376188 CEMIPQ8WUJ3 1361 aa23.48■■□□□ 1.35
PPP1R3F-202ENST00000376188 MED1Q15648 1581 aaPredicted RBP23.48■■□□□ 1.35
PPP1R3F-202ENST00000376188 LMO7Q8WWI1 1683 aa23.48■■□□□ 1.35
PPP1R3F-202ENST00000376188 HMMRO75330 724 aa23.48■■□□□ 1.35
PPP1R3F-202ENST00000376188 TRPM3Q9HCF6 1732 aaPredicted RBP23.47■■□□□ 1.35
PPP1R3F-202ENST00000376188 FLIIQ13045 1269 aa23.47■■□□□ 1.35
PPP1R3F-202ENST00000376188 SLC4A10Q6U841 1118 aa23.47■■□□□ 1.35
PPP1R3F-202ENST00000376188 PLEKHM2Q8IWE5 1019 aa23.47■■□□□ 1.35
PPP1R3F-202ENST00000376188 NBPF6Q5VWK0 638 aa23.46■■□□□ 1.35
PPP1R3F-202ENST00000376188 NBPF4Q96M43 638 aa23.46■■□□□ 1.35
PPP1R3F-202ENST00000376188 SLKQ9H2G2 1235 aaPredicted RBP23.46■■□□□ 1.35
PPP1R3F-202ENST00000376188 ANTXR1Q9H6X2 564 aa23.46■■□□□ 1.35
PPP1R3F-202ENST00000376188 KDM3BQ7LBC6 1761 aa23.45■■□□□ 1.35
PPP1R3F-202ENST00000376188 PXDNLA1KZ92 1463 aa23.45■■□□□ 1.34
PPP1R3F-202ENST00000376188 F6X3S4 739 aa23.45■■□□□ 1.34
PPP1R3F-202ENST00000376188 CDC45O75419 566 aa23.44■■□□□ 1.34
PPP1R3F-202ENST00000376188 TBC1D9Q6ZT07 1266 aa23.44■■□□□ 1.34
PPP1R3F-202ENST00000376188 ORAI2Q96SN7 254 aa23.44■■□□□ 1.34
PPP1R3F-202ENST00000376188 FRAT2O75474 233 aaPredicted RBP23.44■■□□□ 1.34
PPP1R3F-202ENST00000376188 FKBP5Q13451 457 aaPredicted RBP23.43■■□□□ 1.34
PPP1R3F-202ENST00000376188 NCAPD2Q15021 1401 aa23.43■■□□□ 1.34
PPP1R3F-202ENST00000376188 GCP02774 474 aa23.42■■□□□ 1.34
PPP1R3F-202ENST00000376188 GNAI2P04899 355 aa23.42■■□□□ 1.34
PPP1R3F-202ENST00000376188 TTC22Q5TAA0 569 aa23.42■■□□□ 1.34
PPP1R3F-202ENST00000376188 ARHGEF25Q86VW2 580 aa23.42■■□□□ 1.34
PPP1R3F-202ENST00000376188 HSCBQ8IWL3 235 aa23.42■■□□□ 1.34
PPP1R3F-202ENST00000376188 CHMP4AQ9BY43 222 aa23.41■■□□□ 1.34
PPP1R3F-202ENST00000376188 CAMTA1Q9Y6Y1 1673 aa23.41■■□□□ 1.34
PPP1R3F-202ENST00000376188 ZBTB7CA1YPR0 619 aa23.41■■□□□ 1.34
PPP1R3F-202ENST00000376188 GNAI3P08754 354 aa23.41■■□□□ 1.34
PPP1R3F-202ENST00000376188 GSPT1P15170 499 aaKnown RBP23.41■■□□□ 1.34
PPP1R3F-202ENST00000376188 PROSER2Q86WR7 435 aaPredicted RBP23.4■■□□□ 1.34
PPP1R3F-202ENST00000376188 SNX21Q969T3 373 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms