RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 CEP85Q6P2H3 762 aa18.02■□□□□ 0.48
MSH5-201ENST00000375703 PTPRCP08575 1304 aa18.02■□□□□ 0.48
MSH5-201ENST00000375703 KIAA0232Q92628 1395 aa18.02■□□□□ 0.48
MSH5-201ENST00000375703 PLEKHG3A1L390 1219 aa18.02■□□□□ 0.48
MSH5-201ENST00000375703 AKAP12Q02952 1782 aa18.02■□□□□ 0.47
MSH5-201ENST00000375703 SLC4A2P04920 1241 aa18.01■□□□□ 0.47
MSH5-201ENST00000375703 SKOR2Q2VWA4 1001 aaPredicted RBP18.01■□□□□ 0.47
MSH5-201ENST00000375703 GAS2L2Q8NHY3 880 aa18.01■□□□□ 0.47
MSH5-201ENST00000375703 RRAGDQ9NQL2 400 aaPredicted RBP18.01■□□□□ 0.47
MSH5-201ENST00000375703 KNDC1Q76NI1 1749 aa18.01■□□□□ 0.47
MSH5-201ENST00000375703 TNRQ92752 1358 aa18.01■□□□□ 0.47
MSH5-201ENST00000375703 SOX12O15370 315 aa18■□□□□ 0.47
MSH5-201ENST00000375703 PTMSP20962 102 aa18■□□□□ 0.47
MSH5-201ENST00000375703 ITSN1Q15811 1721 aa18■□□□□ 0.47
MSH5-201ENST00000375703 RGS12O14924 1447 aa18■□□□□ 0.47
MSH5-201ENST00000375703 TMEM2Q9UHN6 1383 aa18■□□□□ 0.47
MSH5-201ENST00000375703 MEIS3Q99687 375 aa18■□□□□ 0.47
MSH5-201ENST00000375703 APBB1O00213 710 aa18■□□□□ 0.47
MSH5-201ENST00000375703 RABEP1Q15276 862 aa18■□□□□ 0.47
MSH5-201ENST00000375703 OTUD7AQ8TE49 926 aaPredicted RBP18■□□□□ 0.47
MSH5-201ENST00000375703 USP26Q9BXU7 913 aa18■□□□□ 0.47
MSH5-201ENST00000375703 GRPEL1Q9HAV7 217 aa18■□□□□ 0.47
MSH5-201ENST00000375703 MIS18AQ9NYP9 233 aa18■□□□□ 0.47
MSH5-201ENST00000375703 ISY1Q9ULR0 285 aaKnown RBP18■□□□□ 0.47
MSH5-201ENST00000375703 ATP10DQ9P241 1426 aa17.99■□□□□ 0.47
MSH5-201ENST00000375703 SMARCA5O60264 1052 aaPredicted RBP17.99■□□□□ 0.47
MSH5-201ENST00000375703 RTL1A6NKG5 1358 aa17.99■□□□□ 0.47
MSH5-201ENST00000375703 NRKQ7Z2Y5 1582 aa17.98■□□□□ 0.47
MSH5-201ENST00000375703 MSH6P52701 1360 aa17.98■□□□□ 0.47
MSH5-201ENST00000375703 OVOS2A0A0J9YW53 1432 aa17.98■□□□□ 0.47
MSH5-201ENST00000375703 SDSP20132 328 aa17.98■□□□□ 0.47
MSH5-201ENST00000375703 OVOS2Q6IE36 1432 aa17.98■□□□□ 0.47
MSH5-201ENST00000375703 CASC1Q6TDU7 716 aa17.97■□□□□ 0.47
MSH5-201ENST00000375703 RTF1Q92541 710 aaKnown RBP17.97■□□□□ 0.47
MSH5-201ENST00000375703 SSFA2P28290 1259 aa17.97■□□□□ 0.47
MSH5-201ENST00000375703 USP6P35125 1406 aa17.96■□□□□ 0.47
MSH5-201ENST00000375703 CRB1P82279 1406 aa17.96■□□□□ 0.47
MSH5-201ENST00000375703 FOXO3O43524 673 aa17.96■□□□□ 0.47
MSH5-201ENST00000375703 TSPYL4Q9UJ04 414 aa17.96■□□□□ 0.47
MSH5-201ENST00000375703 HMMRO75330 724 aa17.95■□□□□ 0.46
MSH5-201ENST00000375703 MTHFSDQ2M296 383 aaKnown RBP17.95■□□□□ 0.46
MSH5-201ENST00000375703 SLC4A10Q6U841 1118 aa17.95■□□□□ 0.46
MSH5-201ENST00000375703 ADAMTS13Q76LX8 1427 aa17.95■□□□□ 0.46
MSH5-201ENST00000375703 USP31Q70CQ4 1352 aa17.95■□□□□ 0.46
MSH5-201ENST00000375703 GOLGA6L22H0YM25 854 aa17.95■□□□□ 0.46
MSH5-201ENST00000375703 LTKP29376 864 aa17.95■□□□□ 0.46
MSH5-201ENST00000375703 MAP3K19Q56UN5 1328 aa17.94■□□□□ 0.46
MSH5-201ENST00000375703 G2E3Q7L622 706 aa17.94■□□□□ 0.46
MSH5-201ENST00000375703 CLEC17AQ6ZS10 378 aa17.93■□□□□ 0.46
MSH5-201ENST00000375703 F6X3S4 739 aa17.93■□□□□ 0.46
MSH5-201ENST00000375703 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.93■□□□□ 0.46
MSH5-201ENST00000375703 CCT4P50991 539 aaKnown RBP17.92■□□□□ 0.46
MSH5-201ENST00000375703 GAS2L3Q86XJ1 694 aa17.92■□□□□ 0.46
MSH5-201ENST00000375703 SLC26A8Q96RN1 970 aa17.92■□□□□ 0.46
MSH5-201ENST00000375703 ARHGEF10O15013 1369 aa17.92■□□□□ 0.46
MSH5-201ENST00000375703 BAG4O95429 457 aaKnown RBP17.92■□□□□ 0.46
MSH5-201ENST00000375703 REC8O95072 547 aa17.91■□□□□ 0.46
MSH5-201ENST00000375703 PEAK1Q9H792 1746 aa17.91■□□□□ 0.46
MSH5-201ENST00000375703 TTC21AQ8NDW8 1320 aa17.91■□□□□ 0.46
MSH5-201ENST00000375703 PLEKHG1Q9ULL1 1385 aa17.91■□□□□ 0.46
MSH5-201ENST00000375703 AMPHP49418 695 aa17.9■□□□□ 0.46
MSH5-201ENST00000375703 NUCB2P80303 420 aa17.9■□□□□ 0.46
MSH5-201ENST00000375703 ST18O60284 1047 aa17.9■□□□□ 0.46
MSH5-201ENST00000375703 NGDNQ8NEJ9 315 aaKnown RBP17.9■□□□□ 0.46
MSH5-201ENST00000375703 SSH2Q76I76 1423 aa17.89■□□□□ 0.45
MSH5-201ENST00000375703 EYA1Q99502 592 aa17.89■□□□□ 0.45
MSH5-201ENST00000375703 STK31Q9BXU1 1019 aa17.89■□□□□ 0.45
MSH5-201ENST00000375703 DDX49Q9Y6V7 483 aaKnown RBP17.89■□□□□ 0.45
MSH5-201ENST00000375703 ERC2O15083 957 aa17.89■□□□□ 0.45
MSH5-201ENST00000375703 GNAI2P04899 355 aa17.89■□□□□ 0.45
MSH5-201ENST00000375703 PDE1AP54750 535 aa17.89■□□□□ 0.45
MSH5-201ENST00000375703 OSBPL3Q9H4L5 887 aa17.89■□□□□ 0.45
MSH5-201ENST00000375703 AMOTL2Q9Y2J4 779 aa17.89■□□□□ 0.45
MSH5-201ENST00000375703 UBR1Q8IWV7 1749 aa17.89■□□□□ 0.45
MSH5-201ENST00000375703 FLT4P35916 1363 aa17.88■□□□□ 0.45
MSH5-201ENST00000375703 RGPD1P0DJD0 1748 aa17.88■□□□□ 0.45
MSH5-201ENST00000375703 SBNO1A3KN83 1393 aa17.88■□□□□ 0.45
MSH5-201ENST00000375703 CWC22Q9HCG8 908 aaKnown RBP17.88■□□□□ 0.45
MSH5-201ENST00000375703 EID1Q9Y6B2 187 aa17.88■□□□□ 0.45
MSH5-201ENST00000375703 KLHL40Q2TBA0 621 aa17.87■□□□□ 0.45
MSH5-201ENST00000375703 TOPAZ1Q8N9V7 1692 aa17.87■□□□□ 0.45
MSH5-201ENST00000375703 CLCN1P35523 988 aa17.87■□□□□ 0.45
MSH5-201ENST00000375703 PTPRUQ92729 1446 aa17.86■□□□□ 0.45
MSH5-201ENST00000375703 MCTP1Q6DN14 999 aa17.86■□□□□ 0.45
MSH5-201ENST00000375703 EXOC6BQ9Y2D4 811 aa17.86■□□□□ 0.45
MSH5-201ENST00000375703 KDRP35968 1356 aa17.86■□□□□ 0.45
MSH5-201ENST00000375703 NALCNQ8IZF0 1738 aa17.86■□□□□ 0.45
MSH5-201ENST00000375703 IGSF1Q8N6C5 1336 aa17.85■□□□□ 0.45
MSH5-201ENST00000375703 HTATSF1O43719 755 aaKnown RBP17.85■□□□□ 0.45
MSH5-201ENST00000375703 CCDC30Q5VVM6 783 aa17.85■□□□□ 0.45
MSH5-201ENST00000375703 CYP2E1P05181 493 aaPredicted RBP17.85■□□□□ 0.45
MSH5-201ENST00000375703 FKBP5Q13451 457 aaPredicted RBP17.85■□□□□ 0.45
MSH5-201ENST00000375703 GNAI3P08754 354 aa17.84■□□□□ 0.45
MSH5-201ENST00000375703 FLIIQ13045 1269 aa17.84■□□□□ 0.45
MSH5-201ENST00000375703 TRIM44Q96DX7 344 aaPredicted RBP17.84■□□□□ 0.45
MSH5-201ENST00000375703 CEBPAP49715 358 aaPredicted RBP17.84■□□□□ 0.45
MSH5-201ENST00000375703 LRRCC1Q9C099 1032 aa17.84■□□□□ 0.45
MSH5-201ENST00000375703 GNAT3A8MTJ3 354 aa17.83■□□□□ 0.45
MSH5-201ENST00000375703 NLRP6P59044 892 aa17.83■□□□□ 0.45
MSH5-201ENST00000375703 PKP1Q13835 747 aa17.83■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms