RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 PROSER2Q86WR7 435 aaPredicted RBP17.52■□□□□ 0.4
CLCNKA-202ENST00000375692 LRRC7Q96NW7 1537 aa17.52■□□□□ 0.39
CLCNKA-202ENST00000375692 NFE2L2Q16236 605 aa17.51■□□□□ 0.39
CLCNKA-202ENST00000375692 PLEKHG3A1L390 1219 aa17.51■□□□□ 0.39
CLCNKA-202ENST00000375692 MBIPQ9NS73 344 aa17.51■□□□□ 0.39
CLCNKA-202ENST00000375692 GSPT1P15170 499 aaKnown RBP17.5■□□□□ 0.39
CLCNKA-202ENST00000375692 ARHGAP45Q92619 1136 aa17.5■□□□□ 0.39
CLCNKA-202ENST00000375692 ZNF428Q96B54 188 aa17.5■□□□□ 0.39
CLCNKA-202ENST00000375692 C16orf71Q8IYS4 520 aaPredicted RBP17.49■□□□□ 0.39
CLCNKA-202ENST00000375692 C8orf58Q8NAV2 365 aa17.49■□□□□ 0.39
CLCNKA-202ENST00000375692 CDC45O75419 566 aa17.49■□□□□ 0.39
CLCNKA-202ENST00000375692 NGDNQ8NEJ9 315 aaKnown RBP17.49■□□□□ 0.39
CLCNKA-202ENST00000375692 RGPD8O14715 1765 aaPredicted RBP17.48■□□□□ 0.39
CLCNKA-202ENST00000375692 EMILIN1Q9Y6C2 1016 aa17.48■□□□□ 0.39
CLCNKA-202ENST00000375692 BAG4O95429 457 aaKnown RBP17.48■□□□□ 0.39
CLCNKA-202ENST00000375692 TWISTNBQ3B726 338 aaPredicted RBP17.48■□□□□ 0.39
CLCNKA-202ENST00000375692 DDX49Q9Y6V7 483 aaKnown RBP17.48■□□□□ 0.39
CLCNKA-202ENST00000375692 ABCC4O15439 1325 aa17.48■□□□□ 0.39
CLCNKA-202ENST00000375692 PLEKHM2Q8IWE5 1019 aa17.47■□□□□ 0.39
CLCNKA-202ENST00000375692 CDC42BPGQ6DT37 1551 aa17.47■□□□□ 0.39
CLCNKA-202ENST00000375692 FAM83GA6ND36 823 aa17.47■□□□□ 0.39
CLCNKA-202ENST00000375692 GNAI1P63096 354 aa17.47■□□□□ 0.39
CLCNKA-202ENST00000375692 CHMP4BQ9H444 224 aaKnown RBP17.47■□□□□ 0.39
CLCNKA-202ENST00000375692 EDC4Q6P2E9 1401 aaKnown RBP17.47■□□□□ 0.39
CLCNKA-202ENST00000375692 AK9Q5TCS8 1911 aa17.46■□□□□ 0.39
CLCNKA-202ENST00000375692 ANKRD26Q9UPS8 1709 aa17.46■□□□□ 0.39
CLCNKA-202ENST00000375692 DCTN1Q14203 1278 aa17.46■□□□□ 0.39
CLCNKA-202ENST00000375692 IFT57Q9NWB7 429 aa17.46■□□□□ 0.39
CLCNKA-202ENST00000375692 TTC21BQ7Z4L5 1316 aa17.46■□□□□ 0.39
CLCNKA-202ENST00000375692 ZNF853P0CG23 659 aa17.45■□□□□ 0.38
CLCNKA-202ENST00000375692 NALCNQ8IZF0 1738 aa17.45■□□□□ 0.38
CLCNKA-202ENST00000375692 GOLGA6L22H0YM25 854 aa17.45■□□□□ 0.38
CLCNKA-202ENST00000375692 PTMSP20962 102 aa17.45■□□□□ 0.38
CLCNKA-202ENST00000375692 NASPP49321 788 aaPredicted RBP17.45■□□□□ 0.38
CLCNKA-202ENST00000375692 HSP90AA2PQ14568 343 aaPredicted RBP17.45■□□□□ 0.38
CLCNKA-202ENST00000375692 ESCO1Q5FWF5 840 aa17.45■□□□□ 0.38
CLCNKA-202ENST00000375692 OTUD7AQ8TE49 926 aaPredicted RBP17.45■□□□□ 0.38
CLCNKA-202ENST00000375692 ORAI2Q96SN7 254 aa17.45■□□□□ 0.38
CLCNKA-202ENST00000375692 PKP1Q13835 747 aa17.44■□□□□ 0.38
CLCNKA-202ENST00000375692 MCTP1Q6DN14 999 aa17.44■□□□□ 0.38
CLCNKA-202ENST00000375692 SOX12O15370 315 aa17.44■□□□□ 0.38
CLCNKA-202ENST00000375692 APBB1O00213 710 aa17.43■□□□□ 0.38
CLCNKA-202ENST00000375692 NCLP19338 710 aaKnown RBP17.43■□□□□ 0.38
CLCNKA-202ENST00000375692 CALD1Q05682 793 aaKnown RBP17.43■□□□□ 0.38
CLCNKA-202ENST00000375692 NUTM2GQ5VZR2 741 aa17.43■□□□□ 0.38
CLCNKA-202ENST00000375692 ADGRL3Q9HAR2 1447 aa17.43■□□□□ 0.38
CLCNKA-202ENST00000375692 IL13P35225 146 aa17.43■□□□□ 0.38
CLCNKA-202ENST00000375692 KLHL40Q2TBA0 621 aa17.43■□□□□ 0.38
CLCNKA-202ENST00000375692 USP6P35125 1406 aa17.43■□□□□ 0.38
CLCNKA-202ENST00000375692 TMEM94Q12767 1356 aa17.42■□□□□ 0.38
CLCNKA-202ENST00000375692 RRS1Q15050 365 aaKnown RBP17.42■□□□□ 0.38
CLCNKA-202ENST00000375692 CLEC17AQ6ZS10 378 aa17.42■□□□□ 0.38
CLCNKA-202ENST00000375692 COG3Q96JB2 828 aa17.42■□□□□ 0.38
CLCNKA-202ENST00000375692 API5Q9BZZ5 524 aaKnown RBP17.42■□□□□ 0.38
CLCNKA-202ENST00000375692 DCTPP1Q9H773 170 aa17.42■□□□□ 0.38
CLCNKA-202ENST00000375692 TOPAZ1Q8N9V7 1692 aa17.42■□□□□ 0.38
CLCNKA-202ENST00000375692 ZNF335Q9H4Z2 1342 aaPredicted RBP17.41■□□□□ 0.38
CLCNKA-202ENST00000375692 XPCQ01831 940 aaPredicted RBP17.41■□□□□ 0.38
CLCNKA-202ENST00000375692 TTC22Q5TAA0 569 aa17.41■□□□□ 0.38
CLCNKA-202ENST00000375692 USP26Q9BXU7 913 aa17.41■□□□□ 0.38
CLCNKA-202ENST00000375692 PHF8Q9UPP1 1060 aa17.41■□□□□ 0.38
CLCNKA-202ENST00000375692 STRCQ7RTU9 1775 aa17.41■□□□□ 0.38
CLCNKA-202ENST00000375692 STRCP1A6NGW2 1772 aa17.41■□□□□ 0.38
CLCNKA-202ENST00000375692 SMARCA5O60264 1052 aaPredicted RBP17.41■□□□□ 0.38
CLCNKA-202ENST00000375692 CCDC173Q0VFZ6 552 aa17.41■□□□□ 0.38
CLCNKA-202ENST00000375692 RABEP1Q15276 862 aa17.41■□□□□ 0.38
CLCNKA-202ENST00000375692 CFAP44Q96MT7 982 aa17.41■□□□□ 0.38
CLCNKA-202ENST00000375692 KRT24Q2M2I5 525 aa17.4■□□□□ 0.38
CLCNKA-202ENST00000375692 CAVIN1Q6NZI2 390 aaKnown RBP17.4■□□□□ 0.38
CLCNKA-202ENST00000375692 PPP1R9BQ96SB3 815 aa17.4■□□□□ 0.38
CLCNKA-202ENST00000375692 C19orf44Q9H6X5 657 aa17.4■□□□□ 0.38
CLCNKA-202ENST00000375692 FOXO3O43524 673 aa17.39■□□□□ 0.38
CLCNKA-202ENST00000375692 CHAMP1Q96JM3 812 aa17.39■□□□□ 0.37
CLCNKA-202ENST00000375692 ANKARQ7Z5J8 1434 aa17.39■□□□□ 0.37
CLCNKA-202ENST00000375692 AKAP12Q02952 1782 aa17.39■□□□□ 0.37
CLCNKA-202ENST00000375692 MON2Q7Z3U7 1717 aa17.39■□□□□ 0.37
CLCNKA-202ENST00000375692 FMN2Q9NZ56 1722 aa17.39■□□□□ 0.37
CLCNKA-202ENST00000375692 MAP2P11137 1827 aaKnown RBP17.39■□□□□ 0.37
CLCNKA-202ENST00000375692 KIF20BQ96Q89 1820 aa17.39■□□□□ 0.37
CLCNKA-202ENST00000375692 RRP9O43818 475 aaKnown RBP17.38■□□□□ 0.37
CLCNKA-202ENST00000375692 ZGPATQ8N5A5 531 aaKnown RBP17.38■□□□□ 0.37
CLCNKA-202ENST00000375692 SSH2Q76I76 1423 aa17.38■□□□□ 0.37
CLCNKA-202ENST00000375692 NWD1Q149M9 1564 aa17.38■□□□□ 0.37
CLCNKA-202ENST00000375692 ITSN1Q15811 1721 aa17.38■□□□□ 0.37
CLCNKA-202ENST00000375692 SDSP20132 328 aa17.38■□□□□ 0.37
CLCNKA-202ENST00000375692 LMBRD1Q9NUN5 540 aa17.38■□□□□ 0.37
CLCNKA-202ENST00000375692 PLEKHG5O94827 1062 aa17.37■□□□□ 0.37
CLCNKA-202ENST00000375692 ZSCAN23Q3MJ62 389 aa17.37■□□□□ 0.37
CLCNKA-202ENST00000375692 CYP2E1P05181 493 aaPredicted RBP17.36■□□□□ 0.37
CLCNKA-202ENST00000375692 NUCB2P80303 420 aa17.36■□□□□ 0.37
CLCNKA-202ENST00000375692 ANP32BQ92688 251 aaKnown RBP17.36■□□□□ 0.37
CLCNKA-202ENST00000375692 INTS3Q68E01 1043 aaKnown RBP17.36■□□□□ 0.37
CLCNKA-202ENST00000375692 ZSCAN30Q86W11 494 aa17.36■□□□□ 0.37
CLCNKA-202ENST00000375692 DDX17Q92841 729 aaKnown RBP17.36■□□□□ 0.37
CLCNKA-202ENST00000375692 PRPF40AO75400 957 aaKnown RBP17.35■□□□□ 0.37
CLCNKA-202ENST00000375692 ANKRD44Q8N8A2 993 aa17.35■□□□□ 0.37
CLCNKA-202ENST00000375692 RBSNQ9H1K0 784 aa17.35■□□□□ 0.37
CLCNKA-202ENST00000375692 RBM27Q9P2N5 1060 aaKnown RBP17.35■□□□□ 0.37
CLCNKA-202ENST00000375692 NLRP6P59044 892 aa17.35■□□□□ 0.37
CLCNKA-202ENST00000375692 PSME1Q06323 249 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms