RNA–Protein interactions for RNA: ENST00000374255.6

PTBP3-204, Transcript of polypyrimidine tract binding protein 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PTBP3, Length 3,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP3-204ENST00000374255 CASC1Q6TDU7 716 aa9.73□□□□□ -0.85
PTBP3-204ENST00000374255 C16orf71Q8IYS4 520 aaPredicted RBP9.73□□□□□ -0.85
PTBP3-204ENST00000374255 CCDC9Q9Y3X0 531 aaKnown RBP9.73□□□□□ -0.85
PTBP3-204ENST00000374255 ARHGEF28Q8N1W1 1705 aaKnown RBP9.72□□□□□ -0.85
PTBP3-204ENST00000374255 CHRNA2Q15822 529 aa9.72□□□□□ -0.85
PTBP3-204ENST00000374255 HOXC9P31274 260 aa9.72□□□□□ -0.85
PTBP3-204ENST00000374255 CD163L1Q9NR16 1453 aa9.72□□□□□ -0.85
PTBP3-204ENST00000374255 FLT4P35916 1363 aa9.71□□□□□ -0.85
PTBP3-204ENST00000374255 CCDC30Q5VVM6 783 aa9.71□□□□□ -0.85
PTBP3-204ENST00000374255 RAPGEF4Q8WZA2 1011 aa9.71□□□□□ -0.85
PTBP3-204ENST00000374255 SETD1BQ9UPS6 1966 aaKnown RBP9.71□□□□□ -0.85
PTBP3-204ENST00000374255 PLEKHG1Q9ULL1 1385 aa9.71□□□□□ -0.86
PTBP3-204ENST00000374255 ZBTB7BO15156 539 aaPredicted RBP9.71□□□□□ -0.86
PTBP3-204ENST00000374255 FOXD4L5Q5VV16 416 aaPredicted RBP9.71□□□□□ -0.86
PTBP3-204ENST00000374255 FOXD4L4Q8WXT5 416 aaPredicted RBP9.71□□□□□ -0.86
PTBP3-204ENST00000374255 IL1RAPL2Q9NP60 686 aa9.71□□□□□ -0.86
PTBP3-204ENST00000374255 ATP7BP35670 1465 aa9.71□□□□□ -0.86
PTBP3-204ENST00000374255 CPS1P31327 1500 aa9.7□□□□□ -0.86
PTBP3-204ENST00000374255 TTC21AQ8NDW8 1320 aa9.7□□□□□ -0.86
PTBP3-204ENST00000374255 NCLP19338 710 aaKnown RBP9.7□□□□□ -0.86
PTBP3-204ENST00000374255 BTBD11A6QL63 1104 aa9.7□□□□□ -0.86
PTBP3-204ENST00000374255 UBTFL1P0CB47 393 aaPredicted RBP9.7□□□□□ -0.86
PTBP3-204ENST00000374255 KRT28Q7Z3Y7 464 aa9.7□□□□□ -0.86
PTBP3-204ENST00000374255 GCC1Q96CN9 775 aa9.7□□□□□ -0.86
PTBP3-204ENST00000374255 C9orf78Q9NZ63 289 aaPredicted RBP9.7□□□□□ -0.86
PTBP3-204ENST00000374255 USP6P35125 1406 aa9.7□□□□□ -0.86
PTBP3-204ENST00000374255 MAP4K4O95819 1239 aaPredicted RBP9.69□□□□□ -0.86
PTBP3-204ENST00000374255 MYL6BP14649 208 aa9.69□□□□□ -0.86
PTBP3-204ENST00000374255 FLIIQ13045 1269 aa9.69□□□□□ -0.86
PTBP3-204ENST00000374255 HDAC1Q13547 482 aaPredicted RBP9.69□□□□□ -0.86
PTBP3-204ENST00000374255 OTUD7AQ8TE49 926 aaPredicted RBP9.69□□□□□ -0.86
PTBP3-204ENST00000374255 NLRP1Q9C000 1473 aa9.69□□□□□ -0.86
PTBP3-204ENST00000374255 PIP4K2AP48426 406 aaPredicted RBP9.69□□□□□ -0.86
PTBP3-204ENST00000374255 TAF7Q15545 349 aaPredicted RBP9.69□□□□□ -0.86
PTBP3-204ENST00000374255 LGR6Q9HBX8 967 aa9.69□□□□□ -0.86
PTBP3-204ENST00000374255 CHMP3Q9Y3E7 222 aa9.69□□□□□ -0.86
PTBP3-204ENST00000374255 LRRC7Q96NW7 1537 aa9.69□□□□□ -0.86
PTBP3-204ENST00000374255 IFT172Q9UG01 1749 aa9.69□□□□□ -0.86
PTBP3-204ENST00000374255 NBPF6Q5VWK0 638 aa9.69□□□□□ -0.86
PTBP3-204ENST00000374255 NBPF4Q96M43 638 aa9.69□□□□□ -0.86
PTBP3-204ENST00000374255 FAM135BQ49AJ0 1406 aa9.69□□□□□ -0.86
PTBP3-204ENST00000374255 NEURL4Q96JN8 1562 aa9.69□□□□□ -0.86
PTBP3-204ENST00000374255 CHL1O00533 1208 aa9.68□□□□□ -0.86
PTBP3-204ENST00000374255 SURF6O75683 361 aaKnown RBP9.68□□□□□ -0.86
PTBP3-204ENST00000374255 GCP02774 474 aa9.68□□□□□ -0.86
PTBP3-204ENST00000374255 NUCB1Q02818 461 aa9.68□□□□□ -0.86
PTBP3-204ENST00000374255 ADAMTS13Q76LX8 1427 aa9.68□□□□□ -0.86
PTBP3-204ENST00000374255 PNPLA6Q8IY17 1366 aa9.68□□□□□ -0.86
PTBP3-204ENST00000374255 TBC1D2Q9BYX2 928 aa9.68□□□□□ -0.86
PTBP3-204ENST00000374255 STRN4Q9NRL3 753 aa9.68□□□□□ -0.86
PTBP3-204ENST00000374255 GNAI2P04899 355 aa9.68□□□□□ -0.86
PTBP3-204ENST00000374255 FOXD4L6Q3SYB3 417 aaPredicted RBP9.68□□□□□ -0.86
PTBP3-204ENST00000374255 PLEKHO1Q53GL0 409 aaPredicted RBP9.68□□□□□ -0.86
PTBP3-204ENST00000374255 FOXD4L3Q6VB84 417 aaPredicted RBP9.68□□□□□ -0.86
PTBP3-204ENST00000374255 SMC5Q8IY18 1101 aa9.68□□□□□ -0.86
PTBP3-204ENST00000374255 PHAXQ9H814 394 aaKnown RBP9.68□□□□□ -0.86
PTBP3-204ENST00000374255 CPSF1Q10570 1443 aaKnown RBP9.68□□□□□ -0.86
PTBP3-204ENST00000374255 ANKRD24Q8TF21 1146 aa9.68□□□□□ -0.86
PTBP3-204ENST00000374255 SIRT1Q96EB6 747 aa9.68□□□□□ -0.86
PTBP3-204ENST00000374255 MYO3AQ8NEV4 1616 aa9.67□□□□□ -0.86
PTBP3-204ENST00000374255 SLC39A6Q13433 755 aa9.67□□□□□ -0.86
PTBP3-204ENST00000374255 LRRFIP2Q9Y608 721 aaKnown RBP9.67□□□□□ -0.86
PTBP3-204ENST00000374255 AGLP35573 1532 aa9.67□□□□□ -0.86
PTBP3-204ENST00000374255 RBM42Q9BTD8 480 aaKnown RBP9.67□□□□□ -0.86
PTBP3-204ENST00000374255 IQSEC2Q5JU85 1478 aa9.67□□□□□ -0.86
PTBP3-204ENST00000374255 PTPRUQ92729 1446 aa9.67□□□□□ -0.86
PTBP3-204ENST00000374255 KCNH5Q8NCM2 988 aa9.66□□□□□ -0.86
PTBP3-204ENST00000374255 TBC1D32Q96NH3 1257 aa9.66□□□□□ -0.86
PTBP3-204ENST00000374255 ANO2Q9NQ90 1003 aa9.66□□□□□ -0.86
PTBP3-204ENST00000374255 BRPF3Q9ULD4 1205 aa9.66□□□□□ -0.86
PTBP3-204ENST00000374255 KCNQ3O43525 872 aa9.66□□□□□ -0.86
PTBP3-204ENST00000374255 CDC45O75419 566 aa9.66□□□□□ -0.86
PTBP3-204ENST00000374255 IL17REQ8NFR9 667 aa9.66□□□□□ -0.86
PTBP3-204ENST00000374255 CHPF2Q9P2E5 772 aa9.66□□□□□ -0.86
PTBP3-204ENST00000374255 SBNO1A3KN83 1393 aa9.66□□□□□ -0.86
PTBP3-204ENST00000374255 MSH6P52701 1360 aa9.66□□□□□ -0.86
PTBP3-204ENST00000374255 AATKQ6ZMQ8 1374 aa9.66□□□□□ -0.86
PTBP3-204ENST00000374255 PI4KAP2A4QPH2 592 aa9.66□□□□□ -0.86
PTBP3-204ENST00000374255 CCT4P50991 539 aaKnown RBP9.66□□□□□ -0.86
PTBP3-204ENST00000374255 PPP4R3CPQ6ZMV5 832 aa9.66□□□□□ -0.86
PTBP3-204ENST00000374255 TBC1D9Q6ZT07 1266 aa9.66□□□□□ -0.86
PTBP3-204ENST00000374255 TTC5Q8N0Z6 440 aa9.66□□□□□ -0.86
PTBP3-204ENST00000374255 PI4KAP1Q8N8J0 262 aa9.66□□□□□ -0.86
PTBP3-204ENST00000374255 ARHGAP45Q92619 1136 aa9.66□□□□□ -0.86
PTBP3-204ENST00000374255 JARID2Q92833 1246 aaPredicted RBP9.66□□□□□ -0.86
PTBP3-204ENST00000374255 SRGAP3O43295 1099 aa9.65□□□□□ -0.86
PTBP3-204ENST00000374255 KCNJ4P48050 445 aa9.65□□□□□ -0.86
PTBP3-204ENST00000374255 NUTM1Q86Y26 1132 aa9.65□□□□□ -0.86
PTBP3-204ENST00000374255 DDX54Q8TDD1 881 aaKnown RBP9.65□□□□□ -0.86
PTBP3-204ENST00000374255 SIL1Q9H173 461 aa9.65□□□□□ -0.86
PTBP3-204ENST00000374255 SPATA31D1Q6ZQQ2 1576 aa9.65□□□□□ -0.86
PTBP3-204ENST00000374255 GSE1Q14687 1217 aa9.65□□□□□ -0.86
PTBP3-204ENST00000374255 SRCIN1Q9C0H9 1055 aa9.65□□□□□ -0.86
PTBP3-204ENST00000374255 GNAI3P08754 354 aa9.65□□□□□ -0.87
PTBP3-204ENST00000374255 ZNF853P0CG23 659 aa9.65□□□□□ -0.87
PTBP3-204ENST00000374255 RIC3Q7Z5B4 369 aa9.65□□□□□ -0.87
PTBP3-204ENST00000374255 SIRT2Q8IXJ6 389 aa9.65□□□□□ -0.87
PTBP3-204ENST00000374255 KAT6BQ8WYB5 2073 aa9.64□□□□□ -0.87
PTBP3-204ENST00000374255 EVA1CP58658 441 aa9.64□□□□□ -0.87
PTBP3-204ENST00000374255 RPAP2Q8IXW5 612 aaPredicted RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms