RNA–Protein interactions for RNA: ENST00000373386.6

GARNL3-201, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 3,143 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-201ENST00000373386 NRKQ7Z2Y5 1582 aa10.13□□□□□ -0.79
GARNL3-201ENST00000373386 UPF2Q9HAU5 1272 aaKnown RBP10.13□□□□□ -0.79
GARNL3-201ENST00000373386 C3P01024 1663 aa10.12□□□□□ -0.79
GARNL3-201ENST00000373386 RIMS2Q9UQ26 1411 aa10.12□□□□□ -0.79
GARNL3-201ENST00000373386 U2AF1L5P0DN76 240 aaPredicted RBP10.12□□□□□ -0.79
GARNL3-201ENST00000373386 U2AF1Q01081 240 aaKnown RBP eCLIP10.12□□□□□ -0.79
GARNL3-201ENST00000373386 CHMP4CQ96CF2 233 aa10.12□□□□□ -0.79
GARNL3-201ENST00000373386 RAI14Q9P0K7 980 aa10.12□□□□□ -0.79
GARNL3-201ENST00000373386 COG6Q9Y2V7 657 aa10.12□□□□□ -0.79
GARNL3-201ENST00000373386 PRAM1Q96QH2 718 aa10.12□□□□□ -0.79
GARNL3-201ENST00000373386 TRIM35Q9UPQ4 493 aa10.12□□□□□ -0.79
GARNL3-201ENST00000373386 ZBTB22O15209 634 aa10.11□□□□□ -0.79
GARNL3-201ENST00000373386 PRR29P0C7W0 189 aa10.11□□□□□ -0.79
GARNL3-201ENST00000373386 SSR1P43307 286 aaKnown RBP10.11□□□□□ -0.79
GARNL3-201ENST00000373386 SRPK2P78362 688 aaKnown RBP10.11□□□□□ -0.79
GARNL3-201ENST00000373386 PANK1Q8TE04 598 aa10.11□□□□□ -0.79
GARNL3-201ENST00000373386 CGNQ9P2M7 1197 aaKnown RBP10.11□□□□□ -0.79
GARNL3-201ENST00000373386 ITSN1Q15811 1721 aa10.11□□□□□ -0.79
GARNL3-201ENST00000373386 KIF16BQ96L93 1317 aa10.11□□□□□ -0.79
GARNL3-201ENST00000373386 DDX19BQ9UMR2 479 aa10.11□□□□□ -0.79
GARNL3-201ENST00000373386 TOPAZ1Q8N9V7 1692 aa10.11□□□□□ -0.79
GARNL3-201ENST00000373386 PIK3R4Q99570 1358 aa10.11□□□□□ -0.79
GARNL3-201ENST00000373386 DIAPH1O60610 1272 aaKnown RBP10.1□□□□□ -0.79
GARNL3-201ENST00000373386 DZIP1LQ8IYY4 767 aaKnown RBP10.1□□□□□ -0.79
GARNL3-201ENST00000373386 MAP2P11137 1827 aaKnown RBP10.1□□□□□ -0.79
GARNL3-201ENST00000373386 CDK19Q9BWU1 502 aa10.1□□□□□ -0.79
GARNL3-201ENST00000373386 POGKQ9P215 609 aa10.1□□□□□ -0.79
GARNL3-201ENST00000373386 ARID4AP29374 1257 aaPredicted RBP10.09□□□□□ -0.79
GARNL3-201ENST00000373386 NBPF6Q5VWK0 638 aa10.09□□□□□ -0.79
GARNL3-201ENST00000373386 NBPF10Q6P3W6 841 aaKnown RBP10.09□□□□□ -0.79
GARNL3-201ENST00000373386 KIAA1211Q6ZU35 1233 aa10.09□□□□□ -0.79
GARNL3-201ENST00000373386 NBPF5PQ86XG9 351 aaPredicted RBP10.09□□□□□ -0.79
GARNL3-201ENST00000373386 NBPF4Q96M43 638 aa10.09□□□□□ -0.79
GARNL3-201ENST00000373386 SEC24BO95487 1268 aa10.09□□□□□ -0.79
GARNL3-201ENST00000373386 CCDC94Q9BW85 323 aaPredicted RBP10.09□□□□□ -0.79
GARNL3-201ENST00000373386 TSPYL1Q9H0U9 437 aa10.09□□□□□ -0.79
GARNL3-201ENST00000373386 ESPNB1AK53 854 aa10.09□□□□□ -0.79
GARNL3-201ENST00000373386 IPO8O15397 1037 aaKnown RBP10.09□□□□□ -0.79
GARNL3-201ENST00000373386 RLBP1P12271 317 aa10.09□□□□□ -0.79
GARNL3-201ENST00000373386 ARHGAP45Q92619 1136 aa10.09□□□□□ -0.79
GARNL3-201ENST00000373386 TBC1D32Q96NH3 1257 aa10.09□□□□□ -0.79
GARNL3-201ENST00000373386 FAM13BQ9NYF5 915 aa10.09□□□□□ -0.79
GARNL3-201ENST00000373386 PCDHB15Q9Y5E8 787 aa10.09□□□□□ -0.79
GARNL3-201ENST00000373386 RRP7AQ9Y3A4 280 aaKnown RBP10.08□□□□□ -0.8
GARNL3-201ENST00000373386 NALCNQ8IZF0 1738 aa10.08□□□□□ -0.8
GARNL3-201ENST00000373386 PTCH1Q13635 1447 aa10.08□□□□□ -0.8
GARNL3-201ENST00000373386 KIF24Q5T7B8 1368 aa10.08□□□□□ -0.8
GARNL3-201ENST00000373386 UBR1Q8IWV7 1749 aa10.08□□□□□ -0.8
GARNL3-201ENST00000373386 ATF7IPQ6VMQ6 1270 aa10.08□□□□□ -0.8
GARNL3-201ENST00000373386 RINLQ6ZS11 566 aa10.08□□□□□ -0.8
GARNL3-201ENST00000373386 HDGFP51858 240 aaKnown RBP10.07□□□□□ -0.8
GARNL3-201ENST00000373386 TSHZ1Q6ZSZ6 1077 aa10.07□□□□□ -0.8
GARNL3-201ENST00000373386 ANTXR1Q9H6X2 564 aa10.07□□□□□ -0.8
GARNL3-201ENST00000373386 RIMS1Q86UR5 1692 aaKnown RBP10.07□□□□□ -0.8
GARNL3-201ENST00000373386 SMC5Q8IY18 1101 aa10.07□□□□□ -0.8
GARNL3-201ENST00000373386 EXOC8Q8IYI6 725 aa10.07□□□□□ -0.8
GARNL3-201ENST00000373386 GGNBP2Q9H3C7 697 aa10.07□□□□□ -0.8
GARNL3-201ENST00000373386 PDZRN3Q9UPQ7 1066 aa10.07□□□□□ -0.8
GARNL3-201ENST00000373386 CEP83Q9Y592 693 aa10.07□□□□□ -0.8
GARNL3-201ENST00000373386 EP400NLQ6ZTU2 488 aa10.06□□□□□ -0.8
GARNL3-201ENST00000373386 SLKQ9H2G2 1235 aaPredicted RBP10.06□□□□□ -0.8
GARNL3-201ENST00000373386 MINK1Q8N4C8 1332 aaPredicted RBP10.06□□□□□ -0.8
GARNL3-201ENST00000373386 RIPK4P57078 832 aa10.06□□□□□ -0.8
GARNL3-201ENST00000373386 NEUROD2Q15784 382 aa10.06□□□□□ -0.8
GARNL3-201ENST00000373386 CCDC96Q2M329 555 aa10.06□□□□□ -0.8
GARNL3-201ENST00000373386 TRIM27P14373 513 aa10.05□□□□□ -0.8
GARNL3-201ENST00000373386 EFCC1Q9HA90 598 aa10.05□□□□□ -0.8
GARNL3-201ENST00000373386 BSDC1Q9NW68 430 aaPredicted RBP10.05□□□□□ -0.8
GARNL3-201ENST00000373386 LOC102724159A0A0B4J2E5 919 aa10.05□□□□□ -0.8
GARNL3-201ENST00000373386 EXOSC9Q06265 439 aaKnown RBP10.05□□□□□ -0.8
GARNL3-201ENST00000373386 PWP2Q15269 919 aaKnown RBP10.05□□□□□ -0.8
GARNL3-201ENST00000373386 NUTM2DQ5VT03 806 aaPredicted RBP10.05□□□□□ -0.8
GARNL3-201ENST00000373386 RNF217Q8TC41 542 aa10.05□□□□□ -0.8
GARNL3-201ENST00000373386 SMC4Q9NTJ3 1288 aa10.05□□□□□ -0.8
GARNL3-201ENST00000373386 RBM28Q9NW13 759 aaKnown RBP10.05□□□□□ -0.8
GARNL3-201ENST00000373386 CABP1Q9NZU7 370 aa10.05□□□□□ -0.8
GARNL3-201ENST00000373386 STK26Q9P289 416 aa10.05□□□□□ -0.8
GARNL3-201ENST00000373386 RGPD1P0DJD0 1748 aa10.05□□□□□ -0.8
GARNL3-201ENST00000373386 WASLO00401 505 aaPredicted RBP10.05□□□□□ -0.8
GARNL3-201ENST00000373386 FBXO31Q5XUX0 539 aaPredicted RBP10.05□□□□□ -0.8
GARNL3-201ENST00000373386 SSH1Q8WYL5 1049 aa10.05□□□□□ -0.8
GARNL3-201ENST00000373386 TBC1D2Q9BYX2 928 aa10.05□□□□□ -0.8
GARNL3-201ENST00000373386 ZBTB40Q9NUA8 1239 aa10.05□□□□□ -0.8
GARNL3-201ENST00000373386 IFT57Q9NWB7 429 aa10.05□□□□□ -0.8
GARNL3-201ENST00000373386 POLKQ9UBT6 870 aa10.05□□□□□ -0.8
GARNL3-201ENST00000373386 DLG5Q8TDM6 1919 aa10.04□□□□□ -0.8
GARNL3-201ENST00000373386 NFE2L2Q16236 605 aa10.04□□□□□ -0.8
GARNL3-201ENST00000373386 ZNF513Q8N8E2 541 aaPredicted RBP10.04□□□□□ -0.8
GARNL3-201ENST00000373386 ZNF853P0CG23 659 aa10.04□□□□□ -0.8
GARNL3-201ENST00000373386 ZKSCAN8Q15776 578 aaPredicted RBP10.04□□□□□ -0.8
GARNL3-201ENST00000373386 SGSM3Q96HU1 749 aa10.04□□□□□ -0.8
GARNL3-201ENST00000373386 MYCBPQ99417 103 aaPredicted RBP10.04□□□□□ -0.8
GARNL3-201ENST00000373386 ZBTB12Q9Y330 459 aaPredicted RBP10.04□□□□□ -0.8
GARNL3-201ENST00000373386 USP54Q70EL1 1684 aa10.03□□□□□ -0.8
GARNL3-201ENST00000373386 U2SURPO15042 1029 aaKnown RBP10.03□□□□□ -0.8
GARNL3-201ENST00000373386 ARMCX6Q7L4S7 300 aa10.03□□□□□ -0.8
GARNL3-201ENST00000373386 DIP2AQ14689 1571 aa10.03□□□□□ -0.8
GARNL3-201ENST00000373386 IL13P35225 146 aa10.02□□□□□ -0.8
GARNL3-201ENST00000373386 KCNJ4P48050 445 aa10.02□□□□□ -0.8
GARNL3-201ENST00000373386 FOXD4L6Q3SYB3 417 aaPredicted RBP10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms