RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 ANKLE2Q86XL3 938 aa23.58■■□□□ 1.37
USP49-202ENST00000373010 ABTB2Q8N961 1025 aa23.58■■□□□ 1.37
USP49-202ENST00000373010 CHD2O14647 1828 aaKnown RBP23.58■■□□□ 1.37
USP49-202ENST00000373010 ANKRD45Q5TZF3 282 aa23.57■■□□□ 1.36
USP49-202ENST00000373010 HOXC9P31274 260 aa23.57■■□□□ 1.36
USP49-202ENST00000373010 NFKBIBQ15653 356 aa23.57■■□□□ 1.36
USP49-202ENST00000373010 RTF1Q92541 710 aaKnown RBP23.57■■□□□ 1.36
USP49-202ENST00000373010 MFAP1P55081 439 aaKnown RBP23.55■■□□□ 1.36
USP49-202ENST00000373010 C14orf37Q86TY3 774 aa23.55■■□□□ 1.36
USP49-202ENST00000373010 GCC1Q96CN9 775 aa23.55■■□□□ 1.36
USP49-202ENST00000373010 RGS12O14924 1447 aa23.55■■□□□ 1.36
USP49-202ENST00000373010 HAP1P54257 671 aaPredicted RBP23.54■■□□□ 1.36
USP49-202ENST00000373010 BECN1Q14457 450 aa23.54■■□□□ 1.36
USP49-202ENST00000373010 LTV1Q96GA3 475 aaPredicted RBP23.54■■□□□ 1.36
USP49-202ENST00000373010 PHF8Q9UPP1 1060 aa23.54■■□□□ 1.36
USP49-202ENST00000373010 INTS3Q68E01 1043 aaKnown RBP23.53■■□□□ 1.36
USP49-202ENST00000373010 TSPYL4Q9UJ04 414 aa23.53■■□□□ 1.36
USP49-202ENST00000373010 USP54Q70EL1 1684 aa23.52■■□□□ 1.36
USP49-202ENST00000373010 GAS2L2Q8NHY3 880 aa23.52■■□□□ 1.36
USP49-202ENST00000373010 KIF24Q5T7B8 1368 aa23.52■■□□□ 1.36
USP49-202ENST00000373010 ZNF142P52746 1687 aaPredicted RBP23.51■■□□□ 1.35
USP49-202ENST00000373010 NWD1Q149M9 1564 aa23.51■■□□□ 1.35
USP49-202ENST00000373010 C22orf23Q9BZE7 217 aa23.51■■□□□ 1.35
USP49-202ENST00000373010 SLC4A2P04920 1241 aa23.5■■□□□ 1.35
USP49-202ENST00000373010 PTPRCP08575 1304 aa23.48■■□□□ 1.35
USP49-202ENST00000373010 TBC1D2Q9BYX2 928 aa23.48■■□□□ 1.35
USP49-202ENST00000373010 MSH6P52701 1360 aa23.47■■□□□ 1.35
USP49-202ENST00000373010 G2E3Q7L622 706 aa23.47■■□□□ 1.35
USP49-202ENST00000373010 USHBP1Q8N6Y0 703 aa23.47■■□□□ 1.35
USP49-202ENST00000373010 LTN1O94822 1766 aa23.46■■□□□ 1.35
USP49-202ENST00000373010 GNAT3A8MTJ3 354 aa23.46■■□□□ 1.35
USP49-202ENST00000373010 BMP2KLQ5H9B9 411 aa23.46■■□□□ 1.35
USP49-202ENST00000373010 ESCO1Q5FWF5 840 aa23.45■■□□□ 1.35
USP49-202ENST00000373010 SLKQ9H2G2 1235 aaPredicted RBP23.45■■□□□ 1.35
USP49-202ENST00000373010 ADAMTSL3P82987 1691 aa23.45■■□□□ 1.34
USP49-202ENST00000373010 LRRC37A3O60309 1634 aa23.44■■□□□ 1.34
USP49-202ENST00000373010 ATP10DQ9P241 1426 aa23.44■■□□□ 1.34
USP49-202ENST00000373010 HTATSF1O43719 755 aaKnown RBP23.44■■□□□ 1.34
USP49-202ENST00000373010 FRAT2O75474 233 aaPredicted RBP23.44■■□□□ 1.34
USP49-202ENST00000373010 SETD1BQ9UPS6 1966 aaKnown RBP23.44■■□□□ 1.34
USP49-202ENST00000373010 ADGRL3Q9HAR2 1447 aa23.44■■□□□ 1.34
USP49-202ENST00000373010 MEIS3Q99687 375 aa23.43■■□□□ 1.34
USP49-202ENST00000373010 ANKRD44Q8N8A2 993 aa23.43■■□□□ 1.34
USP49-202ENST00000373010 BCL11AQ9H165 835 aa23.43■■□□□ 1.34
USP49-202ENST00000373010 DCTPP1Q9H773 170 aa23.43■■□□□ 1.34
USP49-202ENST00000373010 PSME1Q06323 249 aa23.42■■□□□ 1.34
USP49-202ENST00000373010 IL17REQ8NFR9 667 aa23.42■■□□□ 1.34
USP49-202ENST00000373010 F6X3S4 739 aa23.42■■□□□ 1.34
USP49-202ENST00000373010 RTL1A6NKG5 1358 aa23.42■■□□□ 1.34
USP49-202ENST00000373010 MAP3K5Q99683 1374 aa23.42■■□□□ 1.34
USP49-202ENST00000373010 CEP85Q6P2H3 762 aa23.41■■□□□ 1.34
USP49-202ENST00000373010 ZBTB7CA1YPR0 619 aa23.41■■□□□ 1.34
USP49-202ENST00000373010 NFAT5O94916 1531 aa23.4■■□□□ 1.34
USP49-202ENST00000373010 SLC4A10Q6U841 1118 aa23.4■■□□□ 1.34
USP49-202ENST00000373010 IP6K1Q92551 441 aa23.4■■□□□ 1.34
USP49-202ENST00000373010 RPAP2Q8IXW5 612 aaPredicted RBP23.39■■□□□ 1.34
USP49-202ENST00000373010 NECTIN2Q92692 538 aa23.39■■□□□ 1.34
USP49-202ENST00000373010 NPHP4O75161 1426 aaPredicted RBP23.39■■□□□ 1.33
USP49-202ENST00000373010 ANTXR1Q9H6X2 564 aa23.39■■□□□ 1.33
USP49-202ENST00000373010 PLEKHG5O94827 1062 aa23.37■■□□□ 1.33
USP49-202ENST00000373010 NBPF6Q5VWK0 638 aa23.37■■□□□ 1.33
USP49-202ENST00000373010 C16orf71Q8IYS4 520 aaPredicted RBP23.37■■□□□ 1.33
USP49-202ENST00000373010 SPRYD3Q8NCJ5 442 aa23.37■■□□□ 1.33
USP49-202ENST00000373010 NBPF4Q96M43 638 aa23.37■■□□□ 1.33
USP49-202ENST00000373010 STK31Q9BXU1 1019 aa23.37■■□□□ 1.33
USP49-202ENST00000373010 XPCQ01831 940 aaPredicted RBP23.37■■□□□ 1.33
USP49-202ENST00000373010 PLEKHM2Q8IWE5 1019 aa23.37■■□□□ 1.33
USP49-202ENST00000373010 ORAI2Q96SN7 254 aa23.37■■□□□ 1.33
USP49-202ENST00000373010 TBC1D9Q6ZT07 1266 aa23.36■■□□□ 1.33
USP49-202ENST00000373010 FAM208AQ9UK61 1670 aaKnown RBP23.36■■□□□ 1.33
USP49-202ENST00000373010 TAF7Q15545 349 aaPredicted RBP23.35■■□□□ 1.33
USP49-202ENST00000373010 APBB1O00213 710 aa23.34■■□□□ 1.33
USP49-202ENST00000373010 GSPT1P15170 499 aaKnown RBP23.34■■□□□ 1.33
USP49-202ENST00000373010 RBM25P49756 843 aaKnown RBP23.34■■□□□ 1.33
USP49-202ENST00000373010 RGPD2P0DJD1 1756 aa23.34■■□□□ 1.33
USP49-202ENST00000373010 CCDC30Q5VVM6 783 aa23.34■■□□□ 1.33
USP49-202ENST00000373010 CCT4P50991 539 aaKnown RBP23.33■■□□□ 1.33
USP49-202ENST00000373010 SMARCA5O60264 1052 aaPredicted RBP23.33■■□□□ 1.33
USP49-202ENST00000373010 FLIIQ13045 1269 aa23.33■■□□□ 1.33
USP49-202ENST00000373010 OTUD7AQ8TE49 926 aaPredicted RBP23.33■■□□□ 1.33
USP49-202ENST00000373010 KCNH5Q8NCM2 988 aa23.32■■□□□ 1.32
USP49-202ENST00000373010 FKBP5Q13451 457 aaPredicted RBP23.31■■□□□ 1.32
USP49-202ENST00000373010 LRRC59Q96AG4 307 aaKnown RBP23.31■■□□□ 1.32
USP49-202ENST00000373010 TTC22Q5TAA0 569 aa23.3■■□□□ 1.32
USP49-202ENST00000373010 CDC45O75419 566 aa23.29■■□□□ 1.32
USP49-202ENST00000373010 LGR6Q9HBX8 967 aa23.29■■□□□ 1.32
USP49-202ENST00000373010 BABAM1Q9NWV8 329 aa23.29■■□□□ 1.32
USP49-202ENST00000373010 GSE1Q14687 1217 aa23.29■■□□□ 1.32
USP49-202ENST00000373010 LMOD2Q6P5Q4 547 aa23.29■■□□□ 1.32
USP49-202ENST00000373010 HSCBQ8IWL3 235 aa23.28■■□□□ 1.32
USP49-202ENST00000373010 CACNA1FO60840 1977 aa23.27■■□□□ 1.32
USP49-202ENST00000373010 GCP02774 474 aa23.27■■□□□ 1.32
USP49-202ENST00000373010 CEMIPQ8WUJ3 1361 aa23.27■■□□□ 1.32
USP49-202ENST00000373010 HMMRO75330 724 aa23.27■■□□□ 1.31
USP49-202ENST00000373010 PHRF1Q9P1Y6 1649 aaKnown RBP23.26■■□□□ 1.31
USP49-202ENST00000373010 GNAI2P04899 355 aa23.26■■□□□ 1.31
USP49-202ENST00000373010 PROSER2Q86WR7 435 aaPredicted RBP23.26■■□□□ 1.31
USP49-202ENST00000373010 KIF2CQ99661 725 aa23.26■■□□□ 1.31
USP49-202ENST00000373010 HDGFL1Q5TGJ6 251 aa23.25■■□□□ 1.31
USP49-202ENST00000373010 SOS1Q07889 1333 aaPredicted RBP23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms