RNA–Protein interactions for RNA: ENST00000372873.8

SYNPO2L-201, Transcript of synaptopodin 2 like, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2L, Length 4,121 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2L-201ENST00000372873 KIF14Q15058 1648 aa13.31□□□□□ -0.28
SYNPO2L-201ENST00000372873 PZPP20742 1482 aa13.31□□□□□ -0.28
SYNPO2L-201ENST00000372873 SLU7O95391 586 aaKnown RBP13.31□□□□□ -0.28
SYNPO2L-201ENST00000372873 CD2BP2O95400 341 aaKnown RBP13.31□□□□□ -0.28
SYNPO2L-201ENST00000372873 TMEM132EQ6IEE7 984 aa13.31□□□□□ -0.28
SYNPO2L-201ENST00000372873 DRC1Q96MC2 740 aa13.31□□□□□ -0.28
SYNPO2L-201ENST00000372873 URI1O94763 535 aaPredicted RBP13.31□□□□□ -0.28
SYNPO2L-201ENST00000372873 TERF2Q15554 542 aa13.31□□□□□ -0.28
SYNPO2L-201ENST00000372873 MNAT1P51948 309 aa13.3□□□□□ -0.28
SYNPO2L-201ENST00000372873 UBE2HP62256 183 aa13.3□□□□□ -0.28
SYNPO2L-201ENST00000372873 KRT85P78386 507 aa13.3□□□□□ -0.28
SYNPO2L-201ENST00000372873 TTC31Q49AM3 519 aaPredicted RBP13.3□□□□□ -0.28
SYNPO2L-201ENST00000372873 DMRT2Q9Y5R5 561 aa13.3□□□□□ -0.28
SYNPO2L-201ENST00000372873 KLHL34Q8N239 644 aa13.3□□□□□ -0.28
SYNPO2L-201ENST00000372873 ELF2Q15723 593 aa13.29□□□□□ -0.28
SYNPO2L-201ENST00000372873 CCDC73Q6ZRK6 1079 aa13.29□□□□□ -0.28
SYNPO2L-201ENST00000372873 CCDC102AQ96A19 550 aa13.29□□□□□ -0.28
SYNPO2L-201ENST00000372873 DISP3Q9P2K9 1392 aa13.29□□□□□ -0.28
SYNPO2L-201ENST00000372873 GIMAP7Q8NHV1 300 aa13.28□□□□□ -0.28
SYNPO2L-201ENST00000372873 NOC3LQ8WTT2 800 aaKnown RBP13.28□□□□□ -0.28
SYNPO2L-201ENST00000372873 SDF4Q9BRK5 362 aa13.28□□□□□ -0.28
SYNPO2L-201ENST00000372873 EIF4G3O43432 1585 aaKnown RBP13.28□□□□□ -0.28
SYNPO2L-201ENST00000372873 DNAAF4Q8WXU2 420 aa13.28□□□□□ -0.28
SYNPO2L-201ENST00000372873 CNPY2Q9Y2B0 182 aa13.28□□□□□ -0.28
SYNPO2L-201ENST00000372873 TEX14Q8IWB6 1497 aa13.28□□□□□ -0.28
SYNPO2L-201ENST00000372873 EIF3JO75822 258 aaKnown RBP13.28□□□□□ -0.28
SYNPO2L-201ENST00000372873 SKILP12757 684 aa13.28□□□□□ -0.28
SYNPO2L-201ENST00000372873 FERMT3Q86UX7 667 aa13.28□□□□□ -0.28
SYNPO2L-201ENST00000372873 BANK1Q8NDB2 785 aa13.28□□□□□ -0.28
SYNPO2L-201ENST00000372873 NAT10Q9H0A0 1025 aaKnown RBP13.28□□□□□ -0.28
SYNPO2L-201ENST00000372873 SCAPERQ9BY12 1400 aa13.28□□□□□ -0.28
SYNPO2L-201ENST00000372873 BRD2P25440 801 aaKnown RBP13.28□□□□□ -0.28
SYNPO2L-201ENST00000372873 ZNF165P49910 485 aa13.28□□□□□ -0.28
SYNPO2L-201ENST00000372873 ZMYM4Q5VZL5 1548 aa13.27□□□□□ -0.28
SYNPO2L-201ENST00000372873 ZKSCAN1P17029 563 aaPredicted RBP13.27□□□□□ -0.28
SYNPO2L-201ENST00000372873 SNW1Q13573 536 aaKnown RBP13.27□□□□□ -0.28
SYNPO2L-201ENST00000372873 ARHGAP29Q52LW3 1261 aa13.27□□□□□ -0.28
SYNPO2L-201ENST00000372873 CREBRFQ8IUR6 639 aa13.27□□□□□ -0.28
SYNPO2L-201ENST00000372873 NEK11Q8NG66 645 aa13.27□□□□□ -0.28
SYNPO2L-201ENST00000372873 SLC26A8Q96RN1 970 aa13.27□□□□□ -0.28
SYNPO2L-201ENST00000372873 PYCARDQ9ULZ3 195 aa13.27□□□□□ -0.28
SYNPO2L-201ENST00000372873 IBSPP21815 317 aaPredicted RBP13.27□□□□□ -0.29
SYNPO2L-201ENST00000372873 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.27□□□□□ -0.29
SYNPO2L-201ENST00000372873 FAM200AQ8TCP9 573 aa13.27□□□□□ -0.29
SYNPO2L-201ENST00000372873 MYCBPQ99417 103 aaPredicted RBP13.27□□□□□ -0.29
SYNPO2L-201ENST00000372873 CCDC171Q6TFL3 1326 aa13.27□□□□□ -0.29
SYNPO2L-201ENST00000372873 HNRNPH2P55795 449 aaKnown RBP13.27□□□□□ -0.29
SYNPO2L-201ENST00000372873 DNMT1P26358 1616 aaKnown RBP13.27□□□□□ -0.29
SYNPO2L-201ENST00000372873 A0A1B0GUL7 405 aa13.26□□□□□ -0.29
SYNPO2L-201ENST00000372873 ZNF710Q8N1W2 664 aa13.26□□□□□ -0.29
SYNPO2L-201ENST00000372873 GPRASP1Q5JY77 1395 aa13.26□□□□□ -0.29
SYNPO2L-201ENST00000372873 CCP110O43303 1012 aa13.26□□□□□ -0.29
SYNPO2L-201ENST00000372873 TPM1P09493 284 aa13.26□□□□□ -0.29
SYNPO2L-201ENST00000372873 TDO2P48775 406 aa13.26□□□□□ -0.29
SYNPO2L-201ENST00000372873 CEBPZQ03701 1054 aaKnown RBP13.26□□□□□ -0.29
SYNPO2L-201ENST00000372873 ERO1AQ96HE7 468 aa13.26□□□□□ -0.29
SYNPO2L-201ENST00000372873 DENND4BO75064 1496 aaPredicted RBP13.26□□□□□ -0.29
SYNPO2L-201ENST00000372873 TULP1O00294 542 aaPredicted RBP13.25□□□□□ -0.29
SYNPO2L-201ENST00000372873 SOX12O15370 315 aa13.25□□□□□ -0.29
SYNPO2L-201ENST00000372873 NEMFO60524 1076 aa13.25□□□□□ -0.29
SYNPO2L-201ENST00000372873 CAPN2P17655 700 aa13.25□□□□□ -0.29
SYNPO2L-201ENST00000372873 LARP1BQ659C4 914 aaKnown RBP13.25□□□□□ -0.29
SYNPO2L-201ENST00000372873 LARP6Q9BRS8 491 aaKnown RBP13.25□□□□□ -0.29
SYNPO2L-201ENST00000372873 KINO60870 393 aaKnown RBP13.25□□□□□ -0.29
SYNPO2L-201ENST00000372873 GADD45BO75293 160 aaPredicted RBP13.25□□□□□ -0.29
SYNPO2L-201ENST00000372873 ZNF692Q9BU19 519 aaPredicted RBP13.25□□□□□ -0.29
SYNPO2L-201ENST00000372873 BLMP54132 1417 aaPredicted RBP13.25□□□□□ -0.29
SYNPO2L-201ENST00000372873 ZSCAN26Q16670 478 aa13.25□□□□□ -0.29
SYNPO2L-201ENST00000372873 PDILTQ8N807 584 aa13.25□□□□□ -0.29
SYNPO2L-201ENST00000372873 CCDC34Q96HJ3 373 aa13.25□□□□□ -0.29
SYNPO2L-201ENST00000372873 ZNF215Q9UL58 517 aaPredicted RBP13.25□□□□□ -0.29
SYNPO2L-201ENST00000372873 SMARCA5O60264 1052 aaPredicted RBP13.24□□□□□ -0.29
SYNPO2L-201ENST00000372873 SFPQP23246 707 aaKnown RBP eCLIP13.24□□□□□ -0.29
SYNPO2L-201ENST00000372873 AXDND1Q5T1B0 1012 aaPredicted RBP13.24□□□□□ -0.29
SYNPO2L-201ENST00000372873 DHX37Q8IY37 1157 aaKnown RBP13.24□□□□□ -0.29
SYNPO2L-201ENST00000372873 KIAA1524Q8TCG1 905 aa13.24□□□□□ -0.29
SYNPO2L-201ENST00000372873 SPATA32Q96LK8 384 aa13.24□□□□□ -0.29
SYNPO2L-201ENST00000372873 DDX41Q9UJV9 622 aaKnown RBP13.24□□□□□ -0.29
SYNPO2L-201ENST00000372873 EFCC1Q9HA90 598 aa13.24□□□□□ -0.29
SYNPO2L-201ENST00000372873 IVLP07476 585 aa13.24□□□□□ -0.29
SYNPO2L-201ENST00000372873 CCDC91Q7Z6B0 441 aa13.24□□□□□ -0.29
SYNPO2L-201ENST00000372873 LUZP1Q86V48 1076 aa13.24□□□□□ -0.29
SYNPO2L-201ENST00000372873 ERLIN1O75477 346 aa13.24□□□□□ -0.29
SYNPO2L-201ENST00000372873 PDCP20941 246 aa13.24□□□□□ -0.29
SYNPO2L-201ENST00000372873 CT47A1Q5JQC4 288 aaPredicted RBP13.24□□□□□ -0.29
SYNPO2L-201ENST00000372873 SECISBP2LQ93073 1101 aaKnown RBP13.24□□□□□ -0.29
SYNPO2L-201ENST00000372873 STX6O43752 255 aa13.23□□□□□ -0.29
SYNPO2L-201ENST00000372873 NCBP1Q09161 790 aaKnown RBP13.23□□□□□ -0.29
SYNPO2L-201ENST00000372873 FOSBP53539 338 aa13.23□□□□□ -0.29
SYNPO2L-201ENST00000372873 ERCC4Q92889 916 aaPredicted RBP13.23□□□□□ -0.29
SYNPO2L-201ENST00000372873 SLC12A5Q9H2X9 1139 aa13.23□□□□□ -0.29
SYNPO2L-201ENST00000372873 ARFGAP3Q9NP61 516 aa13.23□□□□□ -0.29
SYNPO2L-201ENST00000372873 NSFL1CQ9UNZ2 370 aaKnown RBP13.23□□□□□ -0.29
SYNPO2L-201ENST00000372873 LRMPQ12912 555 aa13.23□□□□□ -0.29
SYNPO2L-201ENST00000372873 HOMEZQ8IX15 550 aa13.23□□□□□ -0.29
SYNPO2L-201ENST00000372873 ANO6Q4KMQ2 910 aa13.22□□□□□ -0.29
SYNPO2L-201ENST00000372873 TEX2Q8IWB9 1127 aa13.22□□□□□ -0.29
SYNPO2L-201ENST00000372873 CASTP20810 708 aaKnown RBP13.22□□□□□ -0.29
SYNPO2L-201ENST00000372873 NAA30Q147X3 362 aaPredicted RBP13.22□□□□□ -0.29
SYNPO2L-201ENST00000372873 CHMP4CQ96CF2 233 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms