RNA–Protein interactions for RNA: ENST00000372064.8

VEGFA-204, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,909 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-204ENST00000372064 MTHFSDQ2M296 383 aaKnown RBP25.9■■□□□ 1.74
VEGFA-204ENST00000372064 LNPKQ9C0E8 428 aa25.89■■□□□ 1.74
VEGFA-204ENST00000372064 RGS12O14924 1447 aa25.88■■□□□ 1.73
VEGFA-204ENST00000372064 IGSF1Q8N6C5 1336 aa25.88■■□□□ 1.73
VEGFA-204ENST00000372064 SIRT2Q8IXJ6 389 aa25.88■■□□□ 1.73
VEGFA-204ENST00000372064 INTS3Q68E01 1043 aaKnown RBP25.86■■□□□ 1.73
VEGFA-204ENST00000372064 ANKLE2Q86XL3 938 aa25.86■■□□□ 1.73
VEGFA-204ENST00000372064 RBM33Q96EV2 1170 aaKnown RBP25.86■■□□□ 1.73
VEGFA-204ENST00000372064 MIS18AQ9NYP9 233 aa25.86■■□□□ 1.73
VEGFA-204ENST00000372064 ABTB2Q8N961 1025 aa25.85■■□□□ 1.73
VEGFA-204ENST00000372064 RTF1Q92541 710 aaKnown RBP25.84■■□□□ 1.73
VEGFA-204ENST00000372064 HOXC9P31274 260 aa25.83■■□□□ 1.73
VEGFA-204ENST00000372064 C22orf23Q9BZE7 217 aa25.83■■□□□ 1.73
VEGFA-204ENST00000372064 BMP2KLQ5H9B9 411 aa25.82■■□□□ 1.72
VEGFA-204ENST00000372064 ANKRD45Q5TZF3 282 aa25.82■■□□□ 1.72
VEGFA-204ENST00000372064 LRRC37A3O60309 1634 aa25.82■■□□□ 1.72
VEGFA-204ENST00000372064 PTPRCP08575 1304 aa25.82■■□□□ 1.72
VEGFA-204ENST00000372064 CHD2O14647 1828 aaKnown RBP25.82■■□□□ 1.72
VEGFA-204ENST00000372064 TBC1D2Q9BYX2 928 aa25.81■■□□□ 1.72
VEGFA-204ENST00000372064 NWD1Q149M9 1564 aa25.81■■□□□ 1.72
VEGFA-204ENST00000372064 MFAP1P55081 439 aaKnown RBP25.81■■□□□ 1.72
VEGFA-204ENST00000372064 GAS2L2Q8NHY3 880 aa25.81■■□□□ 1.72
VEGFA-204ENST00000372064 PHF8Q9UPP1 1060 aa25.81■■□□□ 1.72
VEGFA-204ENST00000372064 ZNF142P52746 1687 aaPredicted RBP25.8■■□□□ 1.72
VEGFA-204ENST00000372064 C14orf37Q86TY3 774 aa25.8■■□□□ 1.72
VEGFA-204ENST00000372064 TSPYL4Q9UJ04 414 aa25.8■■□□□ 1.72
VEGFA-204ENST00000372064 LTV1Q96GA3 475 aaPredicted RBP25.78■■□□□ 1.72
VEGFA-204ENST00000372064 ANTXR1Q9H6X2 564 aa25.78■■□□□ 1.72
VEGFA-204ENST00000372064 HTATSF1O43719 755 aaKnown RBP25.77■■□□□ 1.72
VEGFA-204ENST00000372064 ATP10DQ9P241 1426 aa25.77■■□□□ 1.72
VEGFA-204ENST00000372064 SLC4A2P04920 1241 aa25.75■■□□□ 1.71
VEGFA-204ENST00000372064 FRAT2O75474 233 aaPredicted RBP25.75■■□□□ 1.71
VEGFA-204ENST00000372064 BCL11AQ9H165 835 aa25.75■■□□□ 1.71
VEGFA-204ENST00000372064 DCTPP1Q9H773 170 aa25.74■■□□□ 1.71
VEGFA-204ENST00000372064 RBM25P49756 843 aaKnown RBP25.74■■□□□ 1.71
VEGFA-204ENST00000372064 RTL1A6NKG5 1358 aa25.73■■□□□ 1.71
VEGFA-204ENST00000372064 ANKRD44Q8N8A2 993 aa25.73■■□□□ 1.71
VEGFA-204ENST00000372064 MSH6P52701 1360 aa25.73■■□□□ 1.71
VEGFA-204ENST00000372064 GNAT3A8MTJ3 354 aa25.71■■□□□ 1.71
VEGFA-204ENST00000372064 RPAP2Q8IXW5 612 aaPredicted RBP25.71■■□□□ 1.71
VEGFA-204ENST00000372064 ESCO1Q5FWF5 840 aa25.71■■□□□ 1.71
VEGFA-204ENST00000372064 G2E3Q7L622 706 aa25.7■■□□□ 1.71
VEGFA-204ENST00000372064 SLKQ9H2G2 1235 aaPredicted RBP25.7■■□□□ 1.7
VEGFA-204ENST00000372064 USHBP1Q8N6Y0 703 aa25.7■■□□□ 1.7
VEGFA-204ENST00000372064 ADGRL3Q9HAR2 1447 aa25.69■■□□□ 1.7
VEGFA-204ENST00000372064 GSE1Q14687 1217 aa25.69■■□□□ 1.7
VEGFA-204ENST00000372064 CEP85Q6P2H3 762 aa25.69■■□□□ 1.7
VEGFA-204ENST00000372064 LTN1O94822 1766 aa25.68■■□□□ 1.7
VEGFA-204ENST00000372064 MEIS3Q99687 375 aa25.68■■□□□ 1.7
VEGFA-204ENST00000372064 PSME1Q06323 249 aa25.68■■□□□ 1.7
VEGFA-204ENST00000372064 NFAT5O94916 1531 aa25.67■■□□□ 1.7
VEGFA-204ENST00000372064 IL17REQ8NFR9 667 aa25.67■■□□□ 1.7
VEGFA-204ENST00000372064 FAM208AQ9UK61 1670 aaKnown RBP25.67■■□□□ 1.7
VEGFA-204ENST00000372064 MAP3K5Q99683 1374 aa25.67■■□□□ 1.7
VEGFA-204ENST00000372064 ADAMTSL3P82987 1691 aa25.66■■□□□ 1.7
VEGFA-204ENST00000372064 F6X3S4 739 aa25.66■■□□□ 1.7
VEGFA-204ENST00000372064 IP6K1Q92551 441 aa25.66■■□□□ 1.7
VEGFA-204ENST00000372064 PLEKHM2Q8IWE5 1019 aa25.65■■□□□ 1.7
VEGFA-204ENST00000372064 BABAM1Q9NWV8 329 aa25.65■■□□□ 1.7
VEGFA-204ENST00000372064 SETD1BQ9UPS6 1966 aaKnown RBP25.65■■□□□ 1.7
VEGFA-204ENST00000372064 TBC1D9Q6ZT07 1266 aa25.64■■□□□ 1.7
VEGFA-204ENST00000372064 SOS1Q07889 1333 aaPredicted RBP25.64■■□□□ 1.7
VEGFA-204ENST00000372064 NPHP4O75161 1426 aaPredicted RBP25.64■■□□□ 1.7
VEGFA-204ENST00000372064 SLC4A10Q6U841 1118 aa25.64■■□□□ 1.7
VEGFA-204ENST00000372064 PHRF1Q9P1Y6 1649 aaKnown RBP25.63■■□□□ 1.69
VEGFA-204ENST00000372064 ZBTB7CA1YPR0 619 aa25.63■■□□□ 1.69
VEGFA-204ENST00000372064 CCT4P50991 539 aaKnown RBP25.63■■□□□ 1.69
VEGFA-204ENST00000372064 STK31Q9BXU1 1019 aa25.62■■□□□ 1.69
VEGFA-204ENST00000372064 GSPT1P15170 499 aaKnown RBP25.62■■□□□ 1.69
VEGFA-204ENST00000372064 SNX21Q969T3 373 aa25.62■■□□□ 1.69
VEGFA-204ENST00000372064 ORAI2Q96SN7 254 aa25.61■■□□□ 1.69
VEGFA-204ENST00000372064 NBPF6Q5VWK0 638 aa25.61■■□□□ 1.69
VEGFA-204ENST00000372064 NECTIN2Q92692 538 aa25.61■■□□□ 1.69
VEGFA-204ENST00000372064 NBPF4Q96M43 638 aa25.61■■□□□ 1.69
VEGFA-204ENST00000372064 NCOA3Q9Y6Q9 1424 aa25.6■■□□□ 1.69
VEGFA-204ENST00000372064 CDC45O75419 566 aa25.6■■□□□ 1.69
VEGFA-204ENST00000372064 TAF7Q15545 349 aaPredicted RBP25.6■■□□□ 1.69
VEGFA-204ENST00000372064 XPCQ01831 940 aaPredicted RBP25.59■■□□□ 1.69
VEGFA-204ENST00000372064 TTC22Q5TAA0 569 aa25.59■■□□□ 1.69
VEGFA-204ENST00000372064 CCDC30Q5VVM6 783 aa25.59■■□□□ 1.69
VEGFA-204ENST00000372064 HSCBQ8IWL3 235 aa25.59■■□□□ 1.69
VEGFA-204ENST00000372064 C16orf71Q8IYS4 520 aaPredicted RBP25.59■■□□□ 1.69
VEGFA-204ENST00000372064 N4BP2Q86UW6 1770 aaPredicted RBP25.58■■□□□ 1.69
VEGFA-204ENST00000372064 KCNH5Q8NCM2 988 aa25.58■■□□□ 1.69
VEGFA-204ENST00000372064 KIF2CQ99661 725 aa25.58■■□□□ 1.69
VEGFA-204ENST00000372064 FLIIQ13045 1269 aa25.57■■□□□ 1.68
VEGFA-204ENST00000372064 CACNA1FO60840 1977 aa25.57■■□□□ 1.68
VEGFA-204ENST00000372064 PLEKHG5O94827 1062 aa25.57■■□□□ 1.68
VEGFA-204ENST00000372064 SPRYD3Q8NCJ5 442 aa25.57■■□□□ 1.68
VEGFA-204ENST00000372064 MED1Q15648 1581 aaPredicted RBP25.57■■□□□ 1.68
VEGFA-204ENST00000372064 CEMIPQ8WUJ3 1361 aa25.56■■□□□ 1.68
VEGFA-204ENST00000372064 APBB1O00213 710 aa25.55■■□□□ 1.68
VEGFA-204ENST00000372064 EIF5BO60841 1220 aaKnown RBP25.55■■□□□ 1.68
VEGFA-204ENST00000372064 FKBP5Q13451 457 aaPredicted RBP25.55■■□□□ 1.68
VEGFA-204ENST00000372064 OTUD7AQ8TE49 926 aaPredicted RBP25.55■■□□□ 1.68
VEGFA-204ENST00000372064 LRRC59Q96AG4 307 aaKnown RBP25.55■■□□□ 1.68
VEGFA-204ENST00000372064 HMMRO75330 724 aa25.54■■□□□ 1.68
VEGFA-204ENST00000372064 SMARCA5O60264 1052 aaPredicted RBP25.54■■□□□ 1.68
VEGFA-204ENST00000372064 CHMP5Q9NZZ3 219 aa25.54■■□□□ 1.68
VEGFA-204ENST00000372064 PXDNLA1KZ92 1463 aa25.54■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 467.2 ms