RNA–Protein interactions for RNA: ENST00000371600.7

NPDC1-201, Transcript of neural proliferation, differentiation and control 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPDC1, Length 2,187 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPDC1-201ENST00000371600 CRB1P82279 1406 aa31.33■■■□□ 2.61
NPDC1-201ENST00000371600 KRT24Q2M2I5 525 aa31.33■■■□□ 2.61
NPDC1-201ENST00000371600 ANKRD44Q8N8A2 993 aa31.33■■■□□ 2.61
NPDC1-201ENST00000371600 BRPF3Q9ULD4 1205 aa31.33■■■□□ 2.61
NPDC1-201ENST00000371600 MAP3K19Q56UN5 1328 aa31.32■■■□□ 2.6
NPDC1-201ENST00000371600 MCM4P33991 863 aa31.32■■■□□ 2.6
NPDC1-201ENST00000371600 NCOA3Q9Y6Q9 1424 aa31.32■■■□□ 2.6
NPDC1-201ENST00000371600 SBNO1A3KN83 1393 aa31.32■■■□□ 2.6
NPDC1-201ENST00000371600 FLT4P35916 1363 aa31.31■■■□□ 2.6
NPDC1-201ENST00000371600 CDC45O75419 566 aa31.3■■■□□ 2.6
NPDC1-201ENST00000371600 RIMS1Q86UR5 1692 aaKnown RBP31.29■■■□□ 2.6
NPDC1-201ENST00000371600 PLEKHM2Q8IWE5 1019 aa31.29■■■□□ 2.6
NPDC1-201ENST00000371600 RTF1Q92541 710 aaKnown RBP31.29■■■□□ 2.6
NPDC1-201ENST00000371600 SOX12O15370 315 aa31.27■■■□□ 2.6
NPDC1-201ENST00000371600 NGDNQ8NEJ9 315 aaKnown RBP31.27■■■□□ 2.6
NPDC1-201ENST00000371600 KDRP35968 1356 aa31.27■■■□□ 2.6
NPDC1-201ENST00000371600 KIF2CQ99661 725 aa31.27■■■□□ 2.6
NPDC1-201ENST00000371600 ATP10DQ9P241 1426 aa31.27■■■□□ 2.6
NPDC1-201ENST00000371600 DDIT3P35638 169 aa31.26■■■□□ 2.6
NPDC1-201ENST00000371600 MTHFSDQ2M296 383 aaKnown RBP31.26■■■□□ 2.59
NPDC1-201ENST00000371600 CEP85Q6P2H3 762 aa31.26■■■□□ 2.59
NPDC1-201ENST00000371600 THEMISQ8N1K5 641 aaPredicted RBP31.26■■■□□ 2.59
NPDC1-201ENST00000371600 SLC4A2P04920 1241 aa31.24■■■□□ 2.59
NPDC1-201ENST00000371600 GAS2L2Q8NHY3 880 aa31.24■■■□□ 2.59
NPDC1-201ENST00000371600 CIZ1Q9ULV3 898 aaPredicted RBP31.24■■■□□ 2.59
NPDC1-201ENST00000371600 RTL1A6NKG5 1358 aa31.23■■■□□ 2.59
NPDC1-201ENST00000371600 GSPT1P15170 499 aaKnown RBP31.23■■■□□ 2.59
NPDC1-201ENST00000371600 IGSF1Q8N6C5 1336 aa31.23■■■□□ 2.59
NPDC1-201ENST00000371600 AMPHP49418 695 aa31.23■■■□□ 2.59
NPDC1-201ENST00000371600 L1TD1Q5T7N2 865 aaKnown RBP31.22■■■□□ 2.59
NPDC1-201ENST00000371600 TSPYL4Q9UJ04 414 aa31.22■■■□□ 2.59
NPDC1-201ENST00000371600 MSH6P52701 1360 aa31.22■■■□□ 2.59
NPDC1-201ENST00000371600 CEP170BQ9Y4F5 1589 aaPredicted RBP31.22■■■□□ 2.59
NPDC1-201ENST00000371600 HSP90AB1P08238 724 aaKnown RBP31.22■■■□□ 2.59
NPDC1-201ENST00000371600 TTC22Q5TAA0 569 aa31.22■■■□□ 2.59
NPDC1-201ENST00000371600 DIP2AQ14689 1571 aa31.21■■■□□ 2.59
NPDC1-201ENST00000371600 HTATSF1O43719 755 aaKnown RBP31.2■■■□□ 2.59
NPDC1-201ENST00000371600 EYA1Q99502 592 aa31.2■■■□□ 2.59
NPDC1-201ENST00000371600 FOXO3O43524 673 aa31.2■■■□□ 2.58
NPDC1-201ENST00000371600 FMN2Q9NZ56 1722 aa31.19■■■□□ 2.58
NPDC1-201ENST00000371600 DDX11L8A8MPP1 907 aa31.18■■■□□ 2.58
NPDC1-201ENST00000371600 MEIS3Q99687 375 aa31.18■■■□□ 2.58
NPDC1-201ENST00000371600 MIS18AQ9NYP9 233 aa31.18■■■□□ 2.58
NPDC1-201ENST00000371600 CCT4P50991 539 aaKnown RBP31.17■■■□□ 2.58
NPDC1-201ENST00000371600 ANKARQ7Z5J8 1434 aa31.17■■■□□ 2.58
NPDC1-201ENST00000371600 HMMRO75330 724 aa31.16■■■□□ 2.58
NPDC1-201ENST00000371600 K7ELQ4 463 aaPredicted RBP31.15■■■□□ 2.58
NPDC1-201ENST00000371600 ADAMTSL3P82987 1691 aa31.15■■■□□ 2.58
NPDC1-201ENST00000371600 C16orf71Q8IYS4 520 aaPredicted RBP31.15■■■□□ 2.58
NPDC1-201ENST00000371600 RTN4Q9NQC3 1192 aaKnown RBP31.15■■■□□ 2.58
NPDC1-201ENST00000371600 NLRP6P59044 892 aa31.14■■■□□ 2.58
NPDC1-201ENST00000371600 TRAK2O60296 914 aa31.13■■■□□ 2.57
NPDC1-201ENST00000371600 XRN1Q8IZH2 1706 aaKnown RBP31.13■■■□□ 2.57
NPDC1-201ENST00000371600 PIK3C2AO00443 1686 aa31.11■■■□□ 2.57
NPDC1-201ENST00000371600 HSP90AA1P07900 732 aaKnown RBP31.1■■■□□ 2.57
NPDC1-201ENST00000371600 G2E3Q7L622 706 aa31.1■■■□□ 2.57
NPDC1-201ENST00000371600 STK31Q9BXU1 1019 aa31.1■■■□□ 2.57
NPDC1-201ENST00000371600 CD2BP2O95400 341 aaKnown RBP31.09■■■□□ 2.57
NPDC1-201ENST00000371600 RAB3GAP1Q15042 981 aa31.09■■■□□ 2.57
NPDC1-201ENST00000371600 CASC1Q6TDU7 716 aa31.09■■■□□ 2.57
NPDC1-201ENST00000371600 SOS1Q07889 1333 aaPredicted RBP31.09■■■□□ 2.57
NPDC1-201ENST00000371600 GNAT3A8MTJ3 354 aa31.09■■■□□ 2.57
NPDC1-201ENST00000371600 RABEP1Q15276 862 aa31.09■■■□□ 2.57
NPDC1-201ENST00000371600 HOXC9P31274 260 aa31.08■■■□□ 2.57
NPDC1-201ENST00000371600 RGPD8O14715 1765 aaPredicted RBP31.08■■■□□ 2.57
NPDC1-201ENST00000371600 SLC4A10Q6U841 1118 aa31.07■■■□□ 2.57
NPDC1-201ENST00000371600 TNPO1Q92973 898 aaKnown RBP31.07■■■□□ 2.57
NPDC1-201ENST00000371600 GBP4Q96PP9 640 aa31.07■■■□□ 2.57
NPDC1-201ENST00000371600 OTUD7AQ8TE49 926 aaPredicted RBP31.07■■■□□ 2.56
NPDC1-201ENST00000371600 RBM42Q9BTD8 480 aaKnown RBP31.07■■■□□ 2.56
NPDC1-201ENST00000371600 USP26Q9BXU7 913 aa31.07■■■□□ 2.56
NPDC1-201ENST00000371600 DNAJC5Q9H3Z4 198 aa31.07■■■□□ 2.56
NPDC1-201ENST00000371600 BABAM1Q9NWV8 329 aa31.07■■■□□ 2.56
NPDC1-201ENST00000371600 FSD2A1L4K1 749 aa31.06■■■□□ 2.56
NPDC1-201ENST00000371600 GOLGA6L3A6NEY3 463 aa31.06■■■□□ 2.56
NPDC1-201ENST00000371600 SDSP20132 328 aa31.06■■■□□ 2.56
NPDC1-201ENST00000371600 CCDC30Q5VVM6 783 aa31.06■■■□□ 2.56
NPDC1-201ENST00000371600 ZNF142P52746 1687 aaPredicted RBP31.06■■■□□ 2.56
NPDC1-201ENST00000371600 F6X3S4 739 aa31.06■■■□□ 2.56
NPDC1-201ENST00000371600 SMARCA5O60264 1052 aaPredicted RBP31.05■■■□□ 2.56
NPDC1-201ENST00000371600 GNAI2P04899 355 aa31.05■■■□□ 2.56
NPDC1-201ENST00000371600 KCNA6P17658 529 aa31.04■■■□□ 2.56
NPDC1-201ENST00000371600 PTMSP20962 102 aa31.04■■■□□ 2.56
NPDC1-201ENST00000371600 OSBPL3Q9H4L5 887 aa31.04■■■□□ 2.56
NPDC1-201ENST00000371600 LRRC37A3O60309 1634 aa31.02■■■□□ 2.56
NPDC1-201ENST00000371600 APBB1O00213 710 aa31.02■■■□□ 2.56
NPDC1-201ENST00000371600 FLIIQ13045 1269 aa31.02■■■□□ 2.56
NPDC1-201ENST00000371600 ABTB2Q8N961 1025 aa31.01■■■□□ 2.55
NPDC1-201ENST00000371600 GZF1Q9H116 711 aaPredicted RBP31.01■■■□□ 2.55
NPDC1-201ENST00000371600 GNAI3P08754 354 aa31■■■□□ 2.55
NPDC1-201ENST00000371600 MAP3K5Q99683 1374 aa31■■■□□ 2.55
NPDC1-201ENST00000371600 USP54Q70EL1 1684 aa31■■■□□ 2.55
NPDC1-201ENST00000371600 TAF7Q15545 349 aaPredicted RBP30.99■■■□□ 2.55
NPDC1-201ENST00000371600 NWD1Q149M9 1564 aa30.98■■■□□ 2.55
NPDC1-201ENST00000371600 REC8O95072 547 aa30.98■■■□□ 2.55
NPDC1-201ENST00000371600 FKBP5Q13451 457 aaPredicted RBP30.98■■■□□ 2.55
NPDC1-201ENST00000371600 SKOR2Q2VWA4 1001 aaPredicted RBP30.98■■■□□ 2.55
NPDC1-201ENST00000371600 IL17REQ8NFR9 667 aa30.98■■■□□ 2.55
NPDC1-201ENST00000371600 SETD1BQ9UPS6 1966 aaKnown RBP30.97■■■□□ 2.55
NPDC1-201ENST00000371600 NUTM2GQ5VZR2 741 aa30.97■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms