RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 RTF1Q92541 710 aaKnown RBP36.32■■■■□ 3.4
SSBP3-204ENST00000371320 KDRP35968 1356 aa36.32■■■■□ 3.4
SSBP3-204ENST00000371320 EYA1Q99502 592 aa36.31■■■■□ 3.4
SSBP3-204ENST00000371320 FOXO3O43524 673 aa36.3■■■■□ 3.4
SSBP3-204ENST00000371320 INTS3Q68E01 1043 aaKnown RBP36.3■■■■□ 3.4
SSBP3-204ENST00000371320 IGSF1Q8N6C5 1336 aa36.3■■■■□ 3.4
SSBP3-204ENST00000371320 CEP170BQ9Y4F5 1589 aaPredicted RBP36.29■■■■□ 3.4
SSBP3-204ENST00000371320 TBC1D2Q9BYX2 928 aa36.27■■■■□ 3.4
SSBP3-204ENST00000371320 GAS2L2Q8NHY3 880 aa36.26■■■■□ 3.4
SSBP3-204ENST00000371320 BMP2KLQ5H9B9 411 aa36.25■■■■□ 3.39
SSBP3-204ENST00000371320 NUTM2GQ5VZR2 741 aa36.25■■■■□ 3.39
SSBP3-204ENST00000371320 MIS18AQ9NYP9 233 aa36.25■■■■□ 3.39
SSBP3-204ENST00000371320 PTPRCP08575 1304 aa36.24■■■■□ 3.39
SSBP3-204ENST00000371320 TSPYL4Q9UJ04 414 aa36.23■■■■□ 3.39
SSBP3-204ENST00000371320 RGS12O14924 1447 aa36.23■■■■□ 3.39
SSBP3-204ENST00000371320 FRAT2O75474 233 aaPredicted RBP36.23■■■■□ 3.39
SSBP3-204ENST00000371320 ABTB2Q8N961 1025 aa36.22■■■■□ 3.39
SSBP3-204ENST00000371320 HOXC9P31274 260 aa36.22■■■■□ 3.39
SSBP3-204ENST00000371320 BCL11AQ9H165 835 aa36.22■■■■□ 3.39
SSBP3-204ENST00000371320 SLKQ9H2G2 1235 aaPredicted RBP36.21■■■■□ 3.39
SSBP3-204ENST00000371320 ANKLE2Q86XL3 938 aa36.19■■■■□ 3.38
SSBP3-204ENST00000371320 SLC4A2P04920 1241 aa36.19■■■■□ 3.38
SSBP3-204ENST00000371320 HTATSF1O43719 755 aaKnown RBP36.17■■■■□ 3.38
SSBP3-204ENST00000371320 DCTPP1Q9H773 170 aa36.15■■■■□ 3.38
SSBP3-204ENST00000371320 ANTXR1Q9H6X2 564 aa36.15■■■■□ 3.38
SSBP3-204ENST00000371320 PHF8Q9UPP1 1060 aa36.15■■■■□ 3.38
SSBP3-204ENST00000371320 ANKRD44Q8N8A2 993 aa36.14■■■■□ 3.38
SSBP3-204ENST00000371320 C14orf37Q86TY3 774 aa36.13■■■■□ 3.37
SSBP3-204ENST00000371320 MARF1Q9Y4F3 1742 aaKnown RBP36.12■■■■□ 3.37
SSBP3-204ENST00000371320 RPAP2Q8IXW5 612 aaPredicted RBP36.12■■■■□ 3.37
SSBP3-204ENST00000371320 MSH6P52701 1360 aa36.12■■■■□ 3.37
SSBP3-204ENST00000371320 GNAT3A8MTJ3 354 aa36.12■■■■□ 3.37
SSBP3-204ENST00000371320 GSE1Q14687 1217 aa36.12■■■■□ 3.37
SSBP3-204ENST00000371320 USP54Q70EL1 1684 aa36.12■■■■□ 3.37
SSBP3-204ENST00000371320 ADAMTSL3P82987 1691 aa36.11■■■■□ 3.37
SSBP3-204ENST00000371320 RBM25P49756 843 aaKnown RBP36.11■■■■□ 3.37
SSBP3-204ENST00000371320 LTV1Q96GA3 475 aaPredicted RBP36.1■■■■□ 3.37
SSBP3-204ENST00000371320 ATP10DQ9P241 1426 aa36.1■■■■□ 3.37
SSBP3-204ENST00000371320 CEP85Q6P2H3 762 aa36.08■■■■□ 3.37
SSBP3-204ENST00000371320 RTL1A6NKG5 1358 aa36.08■■■■□ 3.37
SSBP3-204ENST00000371320 NWD1Q149M9 1564 aa36.07■■■■□ 3.37
SSBP3-204ENST00000371320 MEIS3Q99687 375 aa36.07■■■■□ 3.36
SSBP3-204ENST00000371320 CHD2O14647 1828 aaKnown RBP36.07■■■■□ 3.36
SSBP3-204ENST00000371320 G2E3Q7L622 706 aa36.06■■■■□ 3.36
SSBP3-204ENST00000371320 RBM33Q96EV2 1170 aaKnown RBP36.05■■■■□ 3.36
SSBP3-204ENST00000371320 STK31Q9BXU1 1019 aa36.04■■■■□ 3.36
SSBP3-204ENST00000371320 TBC1D9Q6ZT07 1266 aa36.04■■■■□ 3.36
SSBP3-204ENST00000371320 MAP3K5Q99683 1374 aa36.03■■■■□ 3.36
SSBP3-204ENST00000371320 PLEKHM2Q8IWE5 1019 aa36.03■■■■□ 3.36
SSBP3-204ENST00000371320 CCT4P50991 539 aaKnown RBP36.02■■■■□ 3.36
SSBP3-204ENST00000371320 SLC4A10Q6U841 1118 aa36.02■■■■□ 3.36
SSBP3-204ENST00000371320 HSCBQ8IWL3 235 aa36.02■■■■□ 3.36
SSBP3-204ENST00000371320 SPRYD3Q8NCJ5 442 aa36.02■■■■□ 3.36
SSBP3-204ENST00000371320 LRRC37A3O60309 1634 aa36.02■■■■□ 3.36
SSBP3-204ENST00000371320 F6X3S4 739 aa36■■■■□ 3.35
SSBP3-204ENST00000371320 IL17REQ8NFR9 667 aa36■■■■□ 3.35
SSBP3-204ENST00000371320 CDC45O75419 566 aa35.99■■■■□ 3.35
SSBP3-204ENST00000371320 CCDC30Q5VVM6 783 aa35.99■■■■□ 3.35
SSBP3-204ENST00000371320 PSME1Q06323 249 aa35.98■■■■□ 3.35
SSBP3-204ENST00000371320 ESCO1Q5FWF5 840 aa35.98■■■■□ 3.35
SSBP3-204ENST00000371320 IP6K1Q92551 441 aa35.98■■■■□ 3.35
SSBP3-204ENST00000371320 ZNF142P52746 1687 aaPredicted RBP35.98■■■■□ 3.35
SSBP3-204ENST00000371320 GSPT1P15170 499 aaKnown RBP35.98■■■■□ 3.35
SSBP3-204ENST00000371320 TAF7Q15545 349 aaPredicted RBP35.97■■■■□ 3.35
SSBP3-204ENST00000371320 USHBP1Q8N6Y0 703 aa35.97■■■■□ 3.35
SSBP3-204ENST00000371320 BABAM1Q9NWV8 329 aa35.97■■■■□ 3.35
SSBP3-204ENST00000371320 ADGRL3Q9HAR2 1447 aa35.97■■■■□ 3.35
SSBP3-204ENST00000371320 C16orf71Q8IYS4 520 aaPredicted RBP35.96■■■■□ 3.35
SSBP3-204ENST00000371320 HMMRO75330 724 aa35.95■■■■□ 3.34
SSBP3-204ENST00000371320 SNX21Q969T3 373 aa35.95■■■■□ 3.34
SSBP3-204ENST00000371320 SOS1Q07889 1333 aaPredicted RBP35.94■■■■□ 3.34
SSBP3-204ENST00000371320 TTC22Q5TAA0 569 aa35.94■■■■□ 3.34
SSBP3-204ENST00000371320 FLIIQ13045 1269 aa35.93■■■■□ 3.34
SSBP3-204ENST00000371320 LTN1O94822 1766 aa35.91■■■■□ 3.34
SSBP3-204ENST00000371320 KCNH5Q8NCM2 988 aa35.91■■■■□ 3.34
SSBP3-204ENST00000371320 CHMP5Q9NZZ3 219 aa35.91■■■■□ 3.34
SSBP3-204ENST00000371320 NFAT5O94916 1531 aa35.9■■■■□ 3.34
SSBP3-204ENST00000371320 APBB1O00213 710 aa35.9■■■■□ 3.34
SSBP3-204ENST00000371320 EIF5BO60841 1220 aaKnown RBP35.9■■■■□ 3.34
SSBP3-204ENST00000371320 FKBP5Q13451 457 aaPredicted RBP35.9■■■■□ 3.34
SSBP3-204ENST00000371320 NECTIN2Q92692 538 aa35.9■■■■□ 3.34
SSBP3-204ENST00000371320 SMARCA5O60264 1052 aaPredicted RBP35.89■■■■□ 3.34
SSBP3-204ENST00000371320 OTUD7AQ8TE49 926 aaPredicted RBP35.88■■■■□ 3.34
SSBP3-204ENST00000371320 KIF2CQ99661 725 aa35.88■■■■□ 3.34
SSBP3-204ENST00000371320 GNAI2P04899 355 aa35.88■■■■□ 3.33
SSBP3-204ENST00000371320 NBPF6Q5VWK0 638 aa35.88■■■■□ 3.33
SSBP3-204ENST00000371320 NBPF4Q96M43 638 aa35.88■■■■□ 3.33
SSBP3-204ENST00000371320 ZBTB7CA1YPR0 619 aa35.87■■■■□ 3.33
SSBP3-204ENST00000371320 FAM208AQ9UK61 1670 aaKnown RBP35.85■■■■□ 3.33
SSBP3-204ENST00000371320 NPHP4O75161 1426 aaPredicted RBP35.85■■■■□ 3.33
SSBP3-204ENST00000371320 GNAI3P08754 354 aa35.83■■■■□ 3.33
SSBP3-204ENST00000371320 CEMIPQ8WUJ3 1361 aa35.82■■■■□ 3.32
SSBP3-204ENST00000371320 NCOA3Q9Y6Q9 1424 aa35.81■■■■□ 3.32
SSBP3-204ENST00000371320 SETD1BQ9UPS6 1966 aaKnown RBP35.81■■■■□ 3.32
SSBP3-204ENST00000371320 HSP90AB1P08238 724 aaKnown RBP35.8■■■■□ 3.32
SSBP3-204ENST00000371320 HDGFL1Q5TGJ6 251 aa35.8■■■■□ 3.32
SSBP3-204ENST00000371320 ORAI2Q96SN7 254 aa35.79■■■■□ 3.32
SSBP3-204ENST00000371320 SDSP20132 328 aa35.79■■■■□ 3.32
SSBP3-204ENST00000371320 CASC1Q6TDU7 716 aa35.76■■■■□ 3.32
SSBP3-204ENST00000371320 LGR6Q9HBX8 967 aa35.76■■■■□ 3.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms