RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 ARAP1Q96P48 1450 aa26.1■■□□□ 1.77
TM9SF3-201ENST00000371142 LRP2BPQ9P2M1 347 aa26.1■■□□□ 1.77
TM9SF3-201ENST00000371142 CBFA2T2O43439 604 aa26.1■■□□□ 1.77
TM9SF3-201ENST00000371142 IDH1O75874 414 aaKnown RBP26.1■■□□□ 1.77
TM9SF3-201ENST00000371142 CTNNA3Q9UI47 895 aa26.1■■□□□ 1.77
TM9SF3-201ENST00000371142 DDX11Q96FC9 970 aa26.09■■□□□ 1.77
TM9SF3-201ENST00000371142 GOLGA6L10A6NI86 522 aa26.09■■□□□ 1.77
TM9SF3-201ENST00000371142 TMEM57Q8N5G2 664 aa26.09■■□□□ 1.77
TM9SF3-201ENST00000371142 CCDC112Q8NEF3 446 aa26.09■■□□□ 1.77
TM9SF3-201ENST00000371142 CCDC184Q52MB2 194 aa26.08■■□□□ 1.77
TM9SF3-201ENST00000371142 ZSCAN31Q96LW9 406 aaPredicted RBP26.08■■□□□ 1.77
TM9SF3-201ENST00000371142 CASTP20810 708 aaKnown RBP26.08■■□□□ 1.77
TM9SF3-201ENST00000371142 NUP62CLQ9H1M0 184 aa26.08■■□□□ 1.77
TM9SF3-201ENST00000371142 ANKRD62A6NC57 917 aa26.08■■□□□ 1.77
TM9SF3-201ENST00000371142 SF3B2Q13435 895 aaKnown RBP26.08■■□□□ 1.77
TM9SF3-201ENST00000371142 CFAP45Q9UL16 551 aa26.07■■□□□ 1.76
TM9SF3-201ENST00000371142 EXOC6BQ9Y2D4 811 aa26.07■■□□□ 1.76
TM9SF3-201ENST00000371142 ERICH3Q5RHP9 1530 aa26.07■■□□□ 1.76
TM9SF3-201ENST00000371142 ZC3H6P61129 1189 aaKnown RBP26.07■■□□□ 1.76
TM9SF3-201ENST00000371142 CALRP27797 417 aaKnown RBP26.06■■□□□ 1.76
TM9SF3-201ENST00000371142 EHBP1L1Q8N3D4 1523 aa26.06■■□□□ 1.76
TM9SF3-201ENST00000371142 USP5P45974 858 aa26.06■■□□□ 1.76
TM9SF3-201ENST00000371142 CENPHQ9H3R5 247 aa26.06■■□□□ 1.76
TM9SF3-201ENST00000371142 DCAF8L1A6NGE4 600 aa26.06■■□□□ 1.76
TM9SF3-201ENST00000371142 NFE2L2Q16236 605 aa26.06■■□□□ 1.76
TM9SF3-201ENST00000371142 GNAT3A8MTJ3 354 aa26.05■■□□□ 1.76
TM9SF3-201ENST00000371142 FCHSD2O94868 740 aa26.05■■□□□ 1.76
TM9SF3-201ENST00000371142 SEPT7Q16181 437 aaKnown RBP26.05■■□□□ 1.76
TM9SF3-201ENST00000371142 SLC52A1Q9NWF4 448 aa26.05■■□□□ 1.76
TM9SF3-201ENST00000371142 IL27Q8NEV9 243 aa26.05■■□□□ 1.76
TM9SF3-201ENST00000371142 NSD3Q9BZ95 1437 aa26.05■■□□□ 1.76
TM9SF3-201ENST00000371142 CCDC66A2RUB6 948 aa26.05■■□□□ 1.76
TM9SF3-201ENST00000371142 ZNF76P36508 570 aa26.05■■□□□ 1.76
TM9SF3-201ENST00000371142 CEP57L1Q8IYX8 460 aa26.05■■□□□ 1.76
TM9SF3-201ENST00000371142 THUMPD2Q9BTF0 503 aaKnown RBP26.05■■□□□ 1.76
TM9SF3-201ENST00000371142 PPP6R1Q9UPN7 881 aa26.05■■□□□ 1.76
TM9SF3-201ENST00000371142 ANKRD30BQ9BXX2 1392 aa26.05■■□□□ 1.76
TM9SF3-201ENST00000371142 UPF3BQ9BZI7 483 aaKnown RBP26.05■■□□□ 1.76
TM9SF3-201ENST00000371142 IGHMBP2P38935 993 aaKnown RBP26.04■■□□□ 1.76
TM9SF3-201ENST00000371142 DHX8Q14562 1220 aaKnown RBP26.04■■□□□ 1.76
TM9SF3-201ENST00000371142 FAM193AP78312 1265 aa26.04■■□□□ 1.76
TM9SF3-201ENST00000371142 KRT32Q14532 448 aa26.04■■□□□ 1.76
TM9SF3-201ENST00000371142 AIDAQ96BJ3 306 aa26.04■■□□□ 1.76
TM9SF3-201ENST00000371142 BMP2KQ9NSY1 1161 aaPredicted RBP26.04■■□□□ 1.76
TM9SF3-201ENST00000371142 TMPOP42166 694 aaKnown RBP26.04■■□□□ 1.76
TM9SF3-201ENST00000371142 IMMTQ16891 758 aaKnown RBP26.04■■□□□ 1.76
TM9SF3-201ENST00000371142 MCM10Q7L590 875 aa26.04■■□□□ 1.76
TM9SF3-201ENST00000371142 FILIP1Q7Z7B0 1213 aa26.04■■□□□ 1.76
TM9SF3-201ENST00000371142 SMARCA5O60264 1052 aaPredicted RBP26.03■■□□□ 1.76
TM9SF3-201ENST00000371142 MATR3P43243 847 aaKnown RBP eCLIP26.03■■□□□ 1.76
TM9SF3-201ENST00000371142 RPAP2Q8IXW5 612 aaPredicted RBP26.03■■□□□ 1.76
TM9SF3-201ENST00000371142 ABCF2Q9UG63 623 aa26.03■■□□□ 1.76
TM9SF3-201ENST00000371142 RAPGEF3O95398 923 aa26.03■■□□□ 1.76
TM9SF3-201ENST00000371142 CAMK4Q16566 473 aa26.02■■□□□ 1.76
TM9SF3-201ENST00000371142 ANKLE2Q86XL3 938 aa26.02■■□□□ 1.76
TM9SF3-201ENST00000371142 ATAD2Q6PL18 1390 aa26.02■■□□□ 1.76
TM9SF3-201ENST00000371142 PIP4K2BP78356 416 aa26.02■■□□□ 1.76
TM9SF3-201ENST00000371142 ENOX2Q16206 610 aaKnown RBP26.02■■□□□ 1.76
TM9SF3-201ENST00000371142 TXLNBQ8N3L3 684 aa26.02■■□□□ 1.76
TM9SF3-201ENST00000371142 PLEKHH2Q8IVE3 1493 aa26.02■■□□□ 1.76
TM9SF3-201ENST00000371142 PLCD4Q9BRC7 762 aa26.01■■□□□ 1.75
TM9SF3-201ENST00000371142 MPHOSPH10O00566 681 aaKnown RBP26.01■■□□□ 1.75
TM9SF3-201ENST00000371142 METTL24Q5JXM2 366 aa26.01■■□□□ 1.75
TM9SF3-201ENST00000371142 DUSP27Q5VZP5 1158 aa26■■□□□ 1.75
TM9SF3-201ENST00000371142 TAX1BP1Q86VP1 789 aa26■■□□□ 1.75
TM9SF3-201ENST00000371142 WASF1Q92558 559 aa26■■□□□ 1.75
TM9SF3-201ENST00000371142 CCDC83Q8IWF9 413 aa26■■□□□ 1.75
TM9SF3-201ENST00000371142 SLFN5Q08AF3 891 aa25.99■■□□□ 1.75
TM9SF3-201ENST00000371142 NUDT16Q96DE0 195 aaKnown RBP25.99■■□□□ 1.75
TM9SF3-201ENST00000371142 UQCRHLA0A096LP55 91 aa25.99■■□□□ 1.75
TM9SF3-201ENST00000371142 UQCRHP07919 91 aa25.99■■□□□ 1.75
TM9SF3-201ENST00000371142 MCM4P33991 863 aa25.99■■□□□ 1.75
TM9SF3-201ENST00000371142 FERMT3Q86UX7 667 aa25.99■■□□□ 1.75
TM9SF3-201ENST00000371142 LRRFIP2Q9Y608 721 aaKnown RBP25.99■■□□□ 1.75
TM9SF3-201ENST00000371142 EIF5P55010 431 aaKnown RBP25.98■■□□□ 1.75
TM9SF3-201ENST00000371142 ERLIN1O75477 346 aa25.98■■□□□ 1.75
TM9SF3-201ENST00000371142 ZRSR2Q15696 482 aaKnown RBP25.97■■□□□ 1.75
TM9SF3-201ENST00000371142 PRPF40BQ6NWY9 871 aaKnown RBP25.97■■□□□ 1.75
TM9SF3-201ENST00000371142 SYCE3A1L190 88 aa25.97■■□□□ 1.75
TM9SF3-201ENST00000371142 DHX37Q8IY37 1157 aaKnown RBP25.97■■□□□ 1.75
TM9SF3-201ENST00000371142 SMTNL1A8MU46 457 aa25.97■■□□□ 1.75
TM9SF3-201ENST00000371142 PTCD1O75127 700 aaKnown RBP25.97■■□□□ 1.75
TM9SF3-201ENST00000371142 KIAA1328Q86T90 577 aa25.96■■□□□ 1.75
TM9SF3-201ENST00000371142 MX1P20591 662 aa25.96■■□□□ 1.75
TM9SF3-201ENST00000371142 STARD3NLO95772 234 aa25.96■■□□□ 1.75
TM9SF3-201ENST00000371142 DAPK1P53355 1430 aa25.95■■□□□ 1.75
TM9SF3-201ENST00000371142 MYD88Q99836 296 aa25.95■■□□□ 1.74
TM9SF3-201ENST00000371142 RPGRIP1LQ68CZ1 1315 aa25.95■■□□□ 1.74
TM9SF3-201ENST00000371142 IBSPP21815 317 aaPredicted RBP25.95■■□□□ 1.74
TM9SF3-201ENST00000371142 MAP3K11Q16584 847 aa25.95■■□□□ 1.74
TM9SF3-201ENST00000371142 KIF1BPQ96EK5 621 aa25.95■■□□□ 1.74
TM9SF3-201ENST00000371142 BOLA2Q9H3K6 86 aa25.95■■□□□ 1.74
TM9SF3-201ENST00000371142 CIZ1Q9ULV3 898 aaPredicted RBP25.95■■□□□ 1.74
TM9SF3-201ENST00000371142 MINDY4BA8MYZ0 360 aa25.95■■□□□ 1.74
TM9SF3-201ENST00000371142 EPB41L2O43491 1005 aaKnown RBP25.95■■□□□ 1.74
TM9SF3-201ENST00000371142 CFAP100Q494V2 611 aa25.95■■□□□ 1.74
TM9SF3-201ENST00000371142 KIAA0754O94854 1291 aa25.94■■□□□ 1.74
TM9SF3-201ENST00000371142 ANKRD18AQ8IVF6 992 aa25.94■■□□□ 1.74
TM9SF3-201ENST00000371142 USHBP1Q8N6Y0 703 aa25.94■■□□□ 1.74
TM9SF3-201ENST00000371142 CEP131Q9UPN4 1083 aa25.94■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms