RNA–Protein interactions for RNA: ENST00000370399.6

TGFBR3-202, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 4,550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-202ENST00000370399 INTS3Q68E01 1043 aaKnown RBP8.75□□□□□ -1.01
TGFBR3-202ENST00000370399 MRPL50Q8N5N7 158 aaKnown RBP8.75□□□□□ -1.01
TGFBR3-202ENST00000370399 NEUROD6Q96NK8 337 aa8.75□□□□□ -1.01
TGFBR3-202ENST00000370399 PLCB2Q00722 1185 aa8.74□□□□□ -1.01
TGFBR3-202ENST00000370399 FLT4P35916 1363 aa8.74□□□□□ -1.01
TGFBR3-202ENST00000370399 CLASRPQ8N2M8 674 aaKnown RBP8.74□□□□□ -1.01
TGFBR3-202ENST00000370399 ZNF521Q96K83 1311 aa8.74□□□□□ -1.01
TGFBR3-202ENST00000370399 PI4KAP2A4QPH2 592 aa8.74□□□□□ -1.01
TGFBR3-202ENST00000370399 ADAMTS2O95450 1211 aa8.74□□□□□ -1.01
TGFBR3-202ENST00000370399 RPAP2Q8IXW5 612 aaPredicted RBP8.74□□□□□ -1.01
TGFBR3-202ENST00000370399 PI4KAP1Q8N8J0 262 aa8.74□□□□□ -1.01
TGFBR3-202ENST00000370399 CCDC85AQ96PX6 553 aaPredicted RBP8.74□□□□□ -1.01
TGFBR3-202ENST00000370399 LRRFIP2Q9Y608 721 aaKnown RBP8.74□□□□□ -1.01
TGFBR3-202ENST00000370399 ZMYM4Q5VZL5 1548 aa8.74□□□□□ -1.01
TGFBR3-202ENST00000370399 ARHGAP31Q2M1Z3 1444 aa8.73□□□□□ -1.01
TGFBR3-202ENST00000370399 JARID2Q92833 1246 aaPredicted RBP8.73□□□□□ -1.01
TGFBR3-202ENST00000370399 KDM5AP29375 1690 aaKnown RBP8.73□□□□□ -1.01
TGFBR3-202ENST00000370399 FRAT2O75474 233 aaPredicted RBP8.73□□□□□ -1.01
TGFBR3-202ENST00000370399 PLEKHF1Q96S99 279 aa8.73□□□□□ -1.01
TGFBR3-202ENST00000370399 LRRCC1Q9C099 1032 aa8.73□□□□□ -1.01
TGFBR3-202ENST00000370399 MAP3K4Q9Y6R4 1608 aa8.73□□□□□ -1.01
TGFBR3-202ENST00000370399 G2E3Q7L622 706 aa8.73□□□□□ -1.01
TGFBR3-202ENST00000370399 NUTM1Q86Y26 1132 aa8.73□□□□□ -1.01
TGFBR3-202ENST00000370399 GBP4Q96PP9 640 aa8.73□□□□□ -1.01
TGFBR3-202ENST00000370399 SPHKAPQ2M3C7 1700 aa8.73□□□□□ -1.01
TGFBR3-202ENST00000370399 A2ML1A8K2U0 1454 aa8.72□□□□□ -1.01
TGFBR3-202ENST00000370399 AMOTQ4VCS5 1084 aa8.72□□□□□ -1.01
TGFBR3-202ENST00000370399 C16orf71Q8IYS4 520 aaPredicted RBP8.72□□□□□ -1.01
TGFBR3-202ENST00000370399 CEP152O94986 1710 aa8.72□□□□□ -1.01
TGFBR3-202ENST00000370399 ZFYVE9O95405 1425 aa8.72□□□□□ -1.01
TGFBR3-202ENST00000370399 SEC24BO95487 1268 aa8.72□□□□□ -1.01
TGFBR3-202ENST00000370399 NBPF6Q5VWK0 638 aa8.72□□□□□ -1.01
TGFBR3-202ENST00000370399 TRIM44Q96DX7 344 aaPredicted RBP8.72□□□□□ -1.01
TGFBR3-202ENST00000370399 NBPF4Q96M43 638 aa8.72□□□□□ -1.01
TGFBR3-202ENST00000370399 LGR6Q9HBX8 967 aa8.72□□□□□ -1.01
TGFBR3-202ENST00000370399 KIDINS220Q9ULH0 1771 aa8.72□□□□□ -1.01
TGFBR3-202ENST00000370399 ZBTB40Q9NUA8 1239 aa8.71□□□□□ -1.01
TGFBR3-202ENST00000370399 CHPF2Q9P2E5 772 aa8.71□□□□□ -1.01
TGFBR3-202ENST00000370399 MADDQ8WXG6 1647 aa8.71□□□□□ -1.02
TGFBR3-202ENST00000370399 TRMT2AQ8IZ69 625 aaKnown RBP8.71□□□□□ -1.02
TGFBR3-202ENST00000370399 PPRC1Q5VV67 1664 aaKnown RBP8.71□□□□□ -1.02
TGFBR3-202ENST00000370399 HSP90AB4PQ58FF6 505 aa8.71□□□□□ -1.02
TGFBR3-202ENST00000370399 NEK4P51957 841 aa8.7□□□□□ -1.02
TGFBR3-202ENST00000370399 C8orf34Q49A92 452 aa8.7□□□□□ -1.02
TGFBR3-202ENST00000370399 DNAAF4Q8WXU2 420 aa8.7□□□□□ -1.02
TGFBR3-202ENST00000370399 IP6K1Q92551 441 aa8.7□□□□□ -1.02
TGFBR3-202ENST00000370399 PHAXQ9H814 394 aaKnown RBP8.7□□□□□ -1.02
TGFBR3-202ENST00000370399 INO80Q9ULG1 1556 aaPredicted RBP8.7□□□□□ -1.02
TGFBR3-202ENST00000370399 NFATC2IPQ8NCF5 419 aa8.7□□□□□ -1.02
TGFBR3-202ENST00000370399 SIRT1Q96EB6 747 aa8.7□□□□□ -1.02
TGFBR3-202ENST00000370399 ATP5J2-PTCD1G3V325 749 aa8.7□□□□□ -1.02
TGFBR3-202ENST00000370399 DBF4Q9UBU7 674 aaPredicted RBP8.7□□□□□ -1.02
TGFBR3-202ENST00000370399 SYNMO15061 1565 aa8.7□□□□□ -1.02
TGFBR3-202ENST00000370399 HSP90B1P14625 803 aaKnown RBP8.69□□□□□ -1.02
TGFBR3-202ENST00000370399 ARHGAP45Q92619 1136 aa8.69□□□□□ -1.02
TGFBR3-202ENST00000370399 CHMP5Q9NZZ3 219 aa8.69□□□□□ -1.02
TGFBR3-202ENST00000370399 NPHP3Q7Z494 1330 aa8.69□□□□□ -1.02
TGFBR3-202ENST00000370399 CHL1O00533 1208 aa8.69□□□□□ -1.02
TGFBR3-202ENST00000370399 ZBTB7BO15156 539 aaPredicted RBP8.69□□□□□ -1.02
TGFBR3-202ENST00000370399 DNAJC2Q99543 621 aaKnown RBP8.69□□□□□ -1.02
TGFBR3-202ENST00000370399 MYD88Q99836 296 aa8.69□□□□□ -1.02
TGFBR3-202ENST00000370399 MAP3K2Q9Y2U5 619 aa8.69□□□□□ -1.02
TGFBR3-202ENST00000370399 GOLGA6L4A6NEF3 574 aa8.69□□□□□ -1.02
TGFBR3-202ENST00000370399 HDAC1Q13547 482 aaPredicted RBP8.69□□□□□ -1.02
TGFBR3-202ENST00000370399 PTPRCP08575 1304 aa8.69□□□□□ -1.02
TGFBR3-202ENST00000370399 DIP2CQ9Y2E4 1556 aa8.69□□□□□ -1.02
TGFBR3-202ENST00000370399 PLEKHG1Q9ULL1 1385 aa8.69□□□□□ -1.02
TGFBR3-202ENST00000370399 ERC2O15083 957 aa8.68□□□□□ -1.02
TGFBR3-202ENST00000370399 IFNL2Q8IZJ0 200 aa8.68□□□□□ -1.02
TGFBR3-202ENST00000370399 ABCA6Q8N139 1617 aa8.68□□□□□ -1.02
TGFBR3-202ENST00000370399 FSD1Q9BTV5 496 aa8.68□□□□□ -1.02
TGFBR3-202ENST00000370399 TOMM22Q9NS69 142 aa8.68□□□□□ -1.02
TGFBR3-202ENST00000370399 MSH6P52701 1360 aa8.68□□□□□ -1.02
TGFBR3-202ENST00000370399 ADGRB3O60242 1522 aa8.68□□□□□ -1.02
TGFBR3-202ENST00000370399 PPP1R42Q7Z4L9 355 aa8.68□□□□□ -1.02
TGFBR3-202ENST00000370399 AACSQ86V21 672 aa8.68□□□□□ -1.02
TGFBR3-202ENST00000370399 ZBTB3Q9H5J0 574 aa8.68□□□□□ -1.02
TGFBR3-202ENST00000370399 KDM2BQ8NHM5 1336 aa8.68□□□□□ -1.02
TGFBR3-202ENST00000370399 RIMBP3CA6NJZ7 1639 aa8.68□□□□□ -1.02
TGFBR3-202ENST00000370399 RIMBP3BA6NNM3 1639 aa8.68□□□□□ -1.02
TGFBR3-202ENST00000370399 RIMBP3Q9UFD9 1639 aa8.68□□□□□ -1.02
TGFBR3-202ENST00000370399 GSE1Q14687 1217 aa8.68□□□□□ -1.02
TGFBR3-202ENST00000370399 RUFY2Q8WXA3 655 aa8.68□□□□□ -1.02
TGFBR3-202ENST00000370399 SBNO1A3KN83 1393 aa8.68□□□□□ -1.02
TGFBR3-202ENST00000370399 NUCB1Q02818 461 aa8.67□□□□□ -1.02
TGFBR3-202ENST00000370399 CWC27Q6UX04 472 aaKnown RBP8.67□□□□□ -1.02
TGFBR3-202ENST00000370399 IL17REQ8NFR9 667 aa8.67□□□□□ -1.02
TGFBR3-202ENST00000370399 DDX49Q9Y6V7 483 aaKnown RBP8.67□□□□□ -1.02
TGFBR3-202ENST00000370399 KCNQ3O43525 872 aa8.67□□□□□ -1.02
TGFBR3-202ENST00000370399 CNTROBQ8N137 903 aa8.67□□□□□ -1.02
TGFBR3-202ENST00000370399 PTMAP06454 111 aaKnown RBP8.67□□□□□ -1.02
TGFBR3-202ENST00000370399 ZKSCAN1P17029 563 aaPredicted RBP8.67□□□□□ -1.02
TGFBR3-202ENST00000370399 AKAP4Q5JQC9 854 aa8.67□□□□□ -1.02
TGFBR3-202ENST00000370399 TBC1D9Q6ZT07 1266 aa8.67□□□□□ -1.02
TGFBR3-202ENST00000370399 INSRP06213 1382 aa8.66□□□□□ -1.02
TGFBR3-202ENST00000370399 MX1P20591 662 aa8.66□□□□□ -1.02
TGFBR3-202ENST00000370399 CWF19L2Q2TBE0 894 aaKnown RBP8.66□□□□□ -1.02
TGFBR3-202ENST00000370399 CCDC8Q9H0W5 538 aaPredicted RBP8.66□□□□□ -1.02
TGFBR3-202ENST00000370399 COPS6Q7L5N1 327 aa8.66□□□□□ -1.02
TGFBR3-202ENST00000370399 UPF3BQ9BZI7 483 aaKnown RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms