RNA–Protein interactions for RNA: ENST00000369047.8

ECM1-202, Transcript of extracellular matrix protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECM1, Length 2,070 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-202ENST00000369047 DLG5Q8TDM6 1919 aa16.71■□□□□ 0.27
ECM1-202ENST00000369047 EIF4A2Q14240 407 aaKnown RBP16.71■□□□□ 0.27
ECM1-202ENST00000369047 DDX17Q92841 729 aaKnown RBP16.71■□□□□ 0.27
ECM1-202ENST00000369047 PDZRN3Q9UPQ7 1066 aa16.71■□□□□ 0.27
ECM1-202ENST00000369047 SPATA31A6Q5VVP1 1343 aa16.7■□□□□ 0.26
ECM1-202ENST00000369047 SPATA31A3Q5VYP0 1347 aa16.7■□□□□ 0.26
ECM1-202ENST00000369047 COL22A1Q8NFW1 1626 aaPredicted RBP16.7■□□□□ 0.26
ECM1-202ENST00000369047 HAP1P54257 671 aaPredicted RBP16.69■□□□□ 0.26
ECM1-202ENST00000369047 ZBTB40Q9NUA8 1239 aa16.69■□□□□ 0.26
ECM1-202ENST00000369047 TMEM57Q8N5G2 664 aa16.69■□□□□ 0.26
ECM1-202ENST00000369047 MBIPQ9NS73 344 aa16.69■□□□□ 0.26
ECM1-202ENST00000369047 XPCQ01831 940 aaPredicted RBP16.68■□□□□ 0.26
ECM1-202ENST00000369047 MRPL50Q8N5N7 158 aaKnown RBP16.68■□□□□ 0.26
ECM1-202ENST00000369047 DAXXQ9UER7 740 aaPredicted RBP16.68■□□□□ 0.26
ECM1-202ENST00000369047 ALS2Q96Q42 1657 aa16.67■□□□□ 0.26
ECM1-202ENST00000369047 SULT6B1Q6IMI4 303 aa16.66■□□□□ 0.26
ECM1-202ENST00000369047 THUMPD2Q9BTF0 503 aaKnown RBP16.66■□□□□ 0.26
ECM1-202ENST00000369047 RGPD1P0DJD0 1748 aa16.66■□□□□ 0.26
ECM1-202ENST00000369047 TWISTNBQ3B726 338 aaPredicted RBP16.66■□□□□ 0.26
ECM1-202ENST00000369047 SMC5Q8IY18 1101 aa16.66■□□□□ 0.26
ECM1-202ENST00000369047 MED1Q15648 1581 aaPredicted RBP16.65■□□□□ 0.26
ECM1-202ENST00000369047 LMOD2Q6P5Q4 547 aa16.65■□□□□ 0.26
ECM1-202ENST00000369047 PEAK1Q9H792 1746 aa16.64■□□□□ 0.25
ECM1-202ENST00000369047 USP35Q9P2H5 1018 aa16.64■□□□□ 0.25
ECM1-202ENST00000369047 HSP90AB2PQ58FF8 381 aa16.63■□□□□ 0.25
ECM1-202ENST00000369047 TSPYL6Q8N831 410 aa16.63■□□□□ 0.25
ECM1-202ENST00000369047 FLT4P35916 1363 aa16.63■□□□□ 0.25
ECM1-202ENST00000369047 KIF24Q5T7B8 1368 aa16.63■□□□□ 0.25
ECM1-202ENST00000369047 API5Q9BZZ5 524 aaKnown RBP16.63■□□□□ 0.25
ECM1-202ENST00000369047 RTL5Q5HYW3 569 aaPredicted RBP16.62■□□□□ 0.25
ECM1-202ENST00000369047 ABTB2Q8N961 1025 aa16.62■□□□□ 0.25
ECM1-202ENST00000369047 UPF2Q9HAU5 1272 aaKnown RBP16.62■□□□□ 0.25
ECM1-202ENST00000369047 CHL1O00533 1208 aa16.61■□□□□ 0.25
ECM1-202ENST00000369047 ZBTB7BO15156 539 aaPredicted RBP16.61■□□□□ 0.25
ECM1-202ENST00000369047 NBR1Q14596 966 aa16.61■□□□□ 0.25
ECM1-202ENST00000369047 AEBP1Q8IUX7 1158 aa16.61■□□□□ 0.25
ECM1-202ENST00000369047 MAP3K19Q56UN5 1328 aa16.61■□□□□ 0.25
ECM1-202ENST00000369047 KIAA0232Q92628 1395 aa16.61■□□□□ 0.25
ECM1-202ENST00000369047 FAM83GA6ND36 823 aa16.61■□□□□ 0.25
ECM1-202ENST00000369047 C8orf58Q8NAV2 365 aa16.61■□□□□ 0.25
ECM1-202ENST00000369047 ABCC4O15439 1325 aa16.6■□□□□ 0.25
ECM1-202ENST00000369047 USP54Q70EL1 1684 aa16.6■□□□□ 0.25
ECM1-202ENST00000369047 USP19O94966 1318 aa16.6■□□□□ 0.25
ECM1-202ENST00000369047 KDRP35968 1356 aa16.59■□□□□ 0.25
ECM1-202ENST00000369047 ABCA3Q99758 1704 aa16.59■□□□□ 0.25
ECM1-202ENST00000369047 PIK3C2AO00443 1686 aa16.59■□□□□ 0.25
ECM1-202ENST00000369047 AMPHP49418 695 aa16.58■□□□□ 0.25
ECM1-202ENST00000369047 MEX3CQ5U5Q3 659 aaKnown RBP16.58■□□□□ 0.25
ECM1-202ENST00000369047 GCC1Q96CN9 775 aa16.58■□□□□ 0.25
ECM1-202ENST00000369047 ELL2O00472 640 aaPredicted RBP16.58■□□□□ 0.24
ECM1-202ENST00000369047 NUCB1Q02818 461 aa16.58■□□□□ 0.24
ECM1-202ENST00000369047 DCTN1Q14203 1278 aa16.58■□□□□ 0.24
ECM1-202ENST00000369047 PHRF1Q9P1Y6 1649 aaKnown RBP16.58■□□□□ 0.24
ECM1-202ENST00000369047 CRYBG1Q9Y4K1 1723 aa16.57■□□□□ 0.24
ECM1-202ENST00000369047 HTATSF1O43719 755 aaKnown RBP16.57■□□□□ 0.24
ECM1-202ENST00000369047 NLRP6P59044 892 aa16.57■□□□□ 0.24
ECM1-202ENST00000369047 MARF1Q9Y4F3 1742 aaKnown RBP16.57■□□□□ 0.24
ECM1-202ENST00000369047 IGSF1Q8N6C5 1336 aa16.57■□□□□ 0.24
ECM1-202ENST00000369047 NUTM2BA6NNL0 878 aaPredicted RBP16.56■□□□□ 0.24
ECM1-202ENST00000369047 NUTM2EB1AL46 878 aaPredicted RBP16.56■□□□□ 0.24
ECM1-202ENST00000369047 SEC24BO95487 1268 aa16.56■□□□□ 0.24
ECM1-202ENST00000369047 NUTM2AQ8IVF1 878 aaPredicted RBP16.56■□□□□ 0.24
ECM1-202ENST00000369047 KCNH5Q8NCM2 988 aa16.56■□□□□ 0.24
ECM1-202ENST00000369047 GAS2L2Q8NHY3 880 aa16.56■□□□□ 0.24
ECM1-202ENST00000369047 BECN1Q14457 450 aa16.55■□□□□ 0.24
ECM1-202ENST00000369047 RTF1Q92541 710 aaKnown RBP16.55■□□□□ 0.24
ECM1-202ENST00000369047 SLIT3O75094 1523 aa16.55■□□□□ 0.24
ECM1-202ENST00000369047 CRB1P82279 1406 aa16.55■□□□□ 0.24
ECM1-202ENST00000369047 LRP6O75581 1613 aa16.54■□□□□ 0.24
ECM1-202ENST00000369047 SOX12O15370 315 aa16.54■□□□□ 0.24
ECM1-202ENST00000369047 INTS3Q68E01 1043 aaKnown RBP16.54■□□□□ 0.24
ECM1-202ENST00000369047 MCM10Q7L590 875 aa16.54■□□□□ 0.24
ECM1-202ENST00000369047 CHD1LQ86WJ1 897 aa16.54■□□□□ 0.24
ECM1-202ENST00000369047 TBC1D32Q96NH3 1257 aa16.54■□□□□ 0.24
ECM1-202ENST00000369047 EYA1Q99502 592 aa16.54■□□□□ 0.24
ECM1-202ENST00000369047 PTPRCP08575 1304 aa16.53■□□□□ 0.24
ECM1-202ENST00000369047 MTHFSDQ2M296 383 aaKnown RBP16.53■□□□□ 0.24
ECM1-202ENST00000369047 NUTM2GQ5VZR2 741 aa16.52■□□□□ 0.24
ECM1-202ENST00000369047 HOXC9P31274 260 aa16.52■□□□□ 0.23
ECM1-202ENST00000369047 RTL1A6NKG5 1358 aa16.51■□□□□ 0.23
ECM1-202ENST00000369047 COL14A1Q05707 1796 aaKnown RBP16.51■□□□□ 0.23
ECM1-202ENST00000369047 SLC4A3P48751 1232 aa16.5■□□□□ 0.23
ECM1-202ENST00000369047 CPDO75976 1380 aa16.5■□□□□ 0.23
ECM1-202ENST00000369047 ADAMTS2O95450 1211 aa16.5■□□□□ 0.23
ECM1-202ENST00000369047 CABLES1Q8TDN4 633 aa16.5■□□□□ 0.23
ECM1-202ENST00000369047 GCP02774 474 aa16.49■□□□□ 0.23
ECM1-202ENST00000369047 BABAM1Q9NWV8 329 aa16.49■□□□□ 0.23
ECM1-202ENST00000369047 SOS1Q07889 1333 aaPredicted RBP16.49■□□□□ 0.23
ECM1-202ENST00000369047 ABCC6O95255 1503 aa16.49■□□□□ 0.23
ECM1-202ENST00000369047 PLEKHG5O94827 1062 aa16.48■□□□□ 0.23
ECM1-202ENST00000369047 DEKP35659 375 aaKnown RBP16.48■□□□□ 0.23
ECM1-202ENST00000369047 NWD2Q9ULI1 1742 aa16.48■□□□□ 0.23
ECM1-202ENST00000369047 GNAT3A8MTJ3 354 aa16.47■□□□□ 0.23
ECM1-202ENST00000369047 BMP2KLQ5H9B9 411 aa16.47■□□□□ 0.23
ECM1-202ENST00000369047 ANKRD45Q5TZF3 282 aa16.47■□□□□ 0.23
ECM1-202ENST00000369047 ZNF772Q68DY9 489 aaPredicted RBP16.47■□□□□ 0.23
ECM1-202ENST00000369047 RPAP2Q8IXW5 612 aaPredicted RBP16.47■□□□□ 0.23
ECM1-202ENST00000369047 NGLY1Q96IV0 654 aa16.47■□□□□ 0.23
ECM1-202ENST00000369047 C8orf37Q96NL8 207 aa16.47■□□□□ 0.23
ECM1-202ENST00000369047 LNPKQ9C0E8 428 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms