RNA–Protein interactions for RNA: ENST00000368935.1

PRUNE1-203, Transcript of prune exopolyphosphatase 1, humanhuman

TSL 1 (best) BASIC

Gene PRUNE1, Length 2,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE1-203ENST00000368935 KRT24Q2M2I5 525 aa12.35□□□□□ -0.43
PRUNE1-203ENST00000368935 GBP4Q96PP9 640 aa12.35□□□□□ -0.43
PRUNE1-203ENST00000368935 ESF1Q9H501 851 aaKnown RBP12.35□□□□□ -0.43
PRUNE1-203ENST00000368935 KIAA0232Q92628 1395 aa12.35□□□□□ -0.43
PRUNE1-203ENST00000368935 TTC22Q5TAA0 569 aa12.35□□□□□ -0.43
PRUNE1-203ENST00000368935 RBM42Q9BTD8 480 aaKnown RBP12.35□□□□□ -0.43
PRUNE1-203ENST00000368935 PANK2Q9BZ23 570 aa12.35□□□□□ -0.43
PRUNE1-203ENST00000368935 TMEM2Q9UHN6 1383 aa12.35□□□□□ -0.43
PRUNE1-203ENST00000368935 USP6P35125 1406 aa12.35□□□□□ -0.43
PRUNE1-203ENST00000368935 ADAMTS13Q76LX8 1427 aa12.35□□□□□ -0.43
PRUNE1-203ENST00000368935 RIMS1Q86UR5 1692 aaKnown RBP12.34□□□□□ -0.43
PRUNE1-203ENST00000368935 CHL1O00533 1208 aa12.34□□□□□ -0.43
PRUNE1-203ENST00000368935 MCM10Q7L590 875 aa12.34□□□□□ -0.43
PRUNE1-203ENST00000368935 ANKRD44Q8N8A2 993 aa12.34□□□□□ -0.43
PRUNE1-203ENST00000368935 EIF5BO60841 1220 aaKnown RBP12.34□□□□□ -0.43
PRUNE1-203ENST00000368935 PTPRCP08575 1304 aa12.34□□□□□ -0.43
PRUNE1-203ENST00000368935 ACEP12821 1306 aa12.34□□□□□ -0.43
PRUNE1-203ENST00000368935 RTL1A6NKG5 1358 aa12.33□□□□□ -0.44
PRUNE1-203ENST00000368935 MRE11P49959 708 aa12.33□□□□□ -0.44
PRUNE1-203ENST00000368935 CEP85Q6P2H3 762 aa12.33□□□□□ -0.44
PRUNE1-203ENST00000368935 FOXD4L1Q9NU39 408 aa12.33□□□□□ -0.44
PRUNE1-203ENST00000368935 AK9Q5TCS8 1911 aa12.33□□□□□ -0.44
PRUNE1-203ENST00000368935 KIF13AQ9H1H9 1805 aa12.33□□□□□ -0.44
PRUNE1-203ENST00000368935 RPAP2Q8IXW5 612 aaPredicted RBP12.33□□□□□ -0.44
PRUNE1-203ENST00000368935 RRAGDQ9NQL2 400 aaPredicted RBP12.33□□□□□ -0.44
PRUNE1-203ENST00000368935 CRB1P82279 1406 aa12.33□□□□□ -0.44
PRUNE1-203ENST00000368935 USP31Q70CQ4 1352 aa12.32□□□□□ -0.44
PRUNE1-203ENST00000368935 ISY1Q9ULR0 285 aaKnown RBP12.32□□□□□ -0.44
PRUNE1-203ENST00000368935 PTMSP20962 102 aa12.31□□□□□ -0.44
PRUNE1-203ENST00000368935 HSP90AB2PQ58FF8 381 aa12.31□□□□□ -0.44
PRUNE1-203ENST00000368935 GAS2L2Q8NHY3 880 aa12.31□□□□□ -0.44
PRUNE1-203ENST00000368935 ARHGEF10O15013 1369 aa12.31□□□□□ -0.44
PRUNE1-203ENST00000368935 PLEKHG3A1L390 1219 aa12.31□□□□□ -0.44
PRUNE1-203ENST00000368935 RABEP1Q15276 862 aa12.31□□□□□ -0.44
PRUNE1-203ENST00000368935 C16orf71Q8IYS4 520 aaPredicted RBP12.31□□□□□ -0.44
PRUNE1-203ENST00000368935 OTUD7AQ8TE49 926 aaPredicted RBP12.31□□□□□ -0.44
PRUNE1-203ENST00000368935 GRPEL1Q9HAV7 217 aa12.31□□□□□ -0.44
PRUNE1-203ENST00000368935 MEIS3Q99687 375 aa12.3□□□□□ -0.44
PRUNE1-203ENST00000368935 PLEKHG1Q9ULL1 1385 aa12.3□□□□□ -0.44
PRUNE1-203ENST00000368935 NUTM2FA1L443 756 aa12.3□□□□□ -0.44
PRUNE1-203ENST00000368935 SKOR2Q2VWA4 1001 aaPredicted RBP12.3□□□□□ -0.44
PRUNE1-203ENST00000368935 FAM208AQ9UK61 1670 aaKnown RBP12.3□□□□□ -0.44
PRUNE1-203ENST00000368935 SSFA2P28290 1259 aa12.29□□□□□ -0.44
PRUNE1-203ENST00000368935 SSH2Q76I76 1423 aa12.29□□□□□ -0.44
PRUNE1-203ENST00000368935 LRRC37A3O60309 1634 aa12.29□□□□□ -0.44
PRUNE1-203ENST00000368935 SOX12O15370 315 aa12.29□□□□□ -0.44
PRUNE1-203ENST00000368935 SMARCA5O60264 1052 aaPredicted RBP12.29□□□□□ -0.44
PRUNE1-203ENST00000368935 SDSP20132 328 aa12.29□□□□□ -0.44
PRUNE1-203ENST00000368935 MAP3K19Q56UN5 1328 aa12.29□□□□□ -0.44
PRUNE1-203ENST00000368935 RGPD8O14715 1765 aaPredicted RBP12.28□□□□□ -0.44
PRUNE1-203ENST00000368935 APBB1O00213 710 aa12.28□□□□□ -0.44
PRUNE1-203ENST00000368935 CASC1Q6TDU7 716 aa12.28□□□□□ -0.44
PRUNE1-203ENST00000368935 USP26Q9BXU7 913 aa12.28□□□□□ -0.44
PRUNE1-203ENST00000368935 TUBGCP6Q96RT7 1819 aa12.28□□□□□ -0.44
PRUNE1-203ENST00000368935 SLC4A2P04920 1241 aa12.27□□□□□ -0.44
PRUNE1-203ENST00000368935 FLT4P35916 1363 aa12.27□□□□□ -0.44
PRUNE1-203ENST00000368935 N4BP2Q86UW6 1770 aaPredicted RBP12.27□□□□□ -0.45
PRUNE1-203ENST00000368935 PIK3C2AO00443 1686 aa12.27□□□□□ -0.45
PRUNE1-203ENST00000368935 PTPRUQ92729 1446 aa12.27□□□□□ -0.45
PRUNE1-203ENST00000368935 SBNO1A3KN83 1393 aa12.27□□□□□ -0.45
PRUNE1-203ENST00000368935 KDRP35968 1356 aa12.27□□□□□ -0.45
PRUNE1-203ENST00000368935 GOLGA6L22H0YM25 854 aa12.27□□□□□ -0.45
PRUNE1-203ENST00000368935 CLEC17AQ6ZS10 378 aa12.27□□□□□ -0.45
PRUNE1-203ENST00000368935 CEP170BQ9Y4F5 1589 aaPredicted RBP12.27□□□□□ -0.45
PRUNE1-203ENST00000368935 TTC21AQ8NDW8 1320 aa12.26□□□□□ -0.45
PRUNE1-203ENST00000368935 FOXO3O43524 673 aa12.26□□□□□ -0.45
PRUNE1-203ENST00000368935 HMMRO75330 724 aa12.26□□□□□ -0.45
PRUNE1-203ENST00000368935 MIS18AQ9NYP9 233 aa12.26□□□□□ -0.45
PRUNE1-203ENST00000368935 TSPYL4Q9UJ04 414 aa12.26□□□□□ -0.45
PRUNE1-203ENST00000368935 XRN1Q8IZH2 1706 aaKnown RBP12.26□□□□□ -0.45
PRUNE1-203ENST00000368935 LTKP29376 864 aa12.26□□□□□ -0.45
PRUNE1-203ENST00000368935 MTHFSDQ2M296 383 aaKnown RBP12.26□□□□□ -0.45
PRUNE1-203ENST00000368935 GAS2L3Q86XJ1 694 aa12.26□□□□□ -0.45
PRUNE1-203ENST00000368935 RTF1Q92541 710 aaKnown RBP12.26□□□□□ -0.45
PRUNE1-203ENST00000368935 CACNA1FO60840 1977 aa12.26□□□□□ -0.45
PRUNE1-203ENST00000368935 DIP2AQ14689 1571 aa12.26□□□□□ -0.45
PRUNE1-203ENST00000368935 CCT4P50991 539 aaKnown RBP12.25□□□□□ -0.45
PRUNE1-203ENST00000368935 G2E3Q7L622 706 aa12.25□□□□□ -0.45
PRUNE1-203ENST00000368935 REC8O95072 547 aa12.25□□□□□ -0.45
PRUNE1-203ENST00000368935 BAG4O95429 457 aaKnown RBP12.25□□□□□ -0.45
PRUNE1-203ENST00000368935 SLC4A10Q6U841 1118 aa12.25□□□□□ -0.45
PRUNE1-203ENST00000368935 F6X3S4 739 aa12.24□□□□□ -0.45
PRUNE1-203ENST00000368935 IGSF1Q8N6C5 1336 aa12.24□□□□□ -0.45
PRUNE1-203ENST00000368935 ST18O60284 1047 aa12.23□□□□□ -0.45
PRUNE1-203ENST00000368935 MARF1Q9Y4F3 1742 aaKnown RBP12.23□□□□□ -0.45
PRUNE1-203ENST00000368935 CLCN1P35523 988 aa12.23□□□□□ -0.45
PRUNE1-203ENST00000368935 NUCB2P80303 420 aa12.23□□□□□ -0.45
PRUNE1-203ENST00000368935 KLHL40Q2TBA0 621 aa12.23□□□□□ -0.45
PRUNE1-203ENST00000368935 SLC26A8Q96RN1 970 aa12.23□□□□□ -0.45
PRUNE1-203ENST00000368935 OSBPL3Q9H4L5 887 aa12.23□□□□□ -0.45
PRUNE1-203ENST00000368935 IBTKQ9P2D0 1353 aaPredicted RBP12.23□□□□□ -0.45
PRUNE1-203ENST00000368935 ERC2O15083 957 aa12.22□□□□□ -0.45
PRUNE1-203ENST00000368935 CYP2E1P05181 493 aaPredicted RBP12.22□□□□□ -0.45
PRUNE1-203ENST00000368935 PDE1AP54750 535 aa12.22□□□□□ -0.45
PRUNE1-203ENST00000368935 DDX49Q9Y6V7 483 aaKnown RBP12.22□□□□□ -0.45
PRUNE1-203ENST00000368935 GNAI2P04899 355 aa12.22□□□□□ -0.45
PRUNE1-203ENST00000368935 EYA1Q99502 592 aa12.22□□□□□ -0.45
PRUNE1-203ENST00000368935 STK31Q9BXU1 1019 aa12.22□□□□□ -0.45
PRUNE1-203ENST00000368935 SLIT1O75093 1534 aa12.21□□□□□ -0.45
PRUNE1-203ENST00000368935 AMPHP49418 695 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms