RNA–Protein interactions for RNA: ENST00000368908.9

LYSMD1-201, Transcript of LysM domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD1, Length 2,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1-201ENST00000368908 MBD3O95983 291 aa12.91□□□□□ -0.34
LYSMD1-201ENST00000368908 NCLP19338 710 aaKnown RBP12.91□□□□□ -0.34
LYSMD1-201ENST00000368908 GPT2Q8TD30 523 aa12.91□□□□□ -0.34
LYSMD1-201ENST00000368908 KIF20BQ96Q89 1820 aa12.91□□□□□ -0.34
LYSMD1-201ENST00000368908 PNPLA6Q8IY17 1366 aa12.91□□□□□ -0.34
LYSMD1-201ENST00000368908 CHGAP10645 457 aaKnown RBP12.9□□□□□ -0.34
LYSMD1-201ENST00000368908 USP26Q9BXU7 913 aa12.9□□□□□ -0.34
LYSMD1-201ENST00000368908 EID1Q9Y6B2 187 aa12.9□□□□□ -0.34
LYSMD1-201ENST00000368908 U2SURPO15042 1029 aaKnown RBP12.9□□□□□ -0.34
LYSMD1-201ENST00000368908 GSPT1P15170 499 aaKnown RBP12.9□□□□□ -0.34
LYSMD1-201ENST00000368908 MRPL50Q8N5N7 158 aaKnown RBP12.9□□□□□ -0.34
LYSMD1-201ENST00000368908 NPHP4O75161 1426 aaPredicted RBP12.9□□□□□ -0.34
LYSMD1-201ENST00000368908 ST18O60284 1047 aa12.89□□□□□ -0.35
LYSMD1-201ENST00000368908 TTC22Q5TAA0 569 aa12.89□□□□□ -0.35
LYSMD1-201ENST00000368908 SIRT2Q8IXJ6 389 aa12.89□□□□□ -0.35
LYSMD1-201ENST00000368908 CCDC94Q9BW85 323 aaPredicted RBP12.89□□□□□ -0.35
LYSMD1-201ENST00000368908 FAM135BQ49AJ0 1406 aa12.89□□□□□ -0.35
LYSMD1-201ENST00000368908 INTS3Q68E01 1043 aaKnown RBP12.89□□□□□ -0.35
LYSMD1-201ENST00000368908 DIP2AQ14689 1571 aa12.89□□□□□ -0.35
LYSMD1-201ENST00000368908 PLEKHM2Q8IWE5 1019 aa12.88□□□□□ -0.35
LYSMD1-201ENST00000368908 A0A1W2PP64 1363 aa12.88□□□□□ -0.35
LYSMD1-201ENST00000368908 PLEKHG1Q9ULL1 1385 aa12.88□□□□□ -0.35
LYSMD1-201ENST00000368908 PRPF40AO75400 957 aaKnown RBP12.88□□□□□ -0.35
LYSMD1-201ENST00000368908 MYRIPQ8NFW9 859 aa12.88□□□□□ -0.35
LYSMD1-201ENST00000368908 TMEM63CQ9P1W3 806 aa12.88□□□□□ -0.35
LYSMD1-201ENST00000368908 NCKAP5LQ9HCH0 1330 aa12.88□□□□□ -0.35
LYSMD1-201ENST00000368908 KIAA2012Q0VF49 1180 aa12.87□□□□□ -0.35
LYSMD1-201ENST00000368908 TXNDC2Q86VQ3 553 aa12.87□□□□□ -0.35
LYSMD1-201ENST00000368908 PRIMPOLQ96LW4 560 aa12.87□□□□□ -0.35
LYSMD1-201ENST00000368908 RBM27Q9P2N5 1060 aaKnown RBP12.87□□□□□ -0.35
LYSMD1-201ENST00000368908 ZDHHC9Q9Y397 364 aa12.87□□□□□ -0.35
LYSMD1-201ENST00000368908 FCHSD2O94868 740 aa12.86□□□□□ -0.35
LYSMD1-201ENST00000368908 LTKP29376 864 aa12.86□□□□□ -0.35
LYSMD1-201ENST00000368908 DIAPH1O60610 1272 aaKnown RBP12.86□□□□□ -0.35
LYSMD1-201ENST00000368908 VAMP4O75379 141 aa12.86□□□□□ -0.35
LYSMD1-201ENST00000368908 GTF2F1P35269 517 aaKnown RBP eCLIP12.86□□□□□ -0.35
LYSMD1-201ENST00000368908 DMTNQ08495 405 aa12.86□□□□□ -0.35
LYSMD1-201ENST00000368908 PKP1Q13835 747 aa12.86□□□□□ -0.35
LYSMD1-201ENST00000368908 DCTPP1Q9H773 170 aa12.86□□□□□ -0.35
LYSMD1-201ENST00000368908 CASC1Q6TDU7 716 aa12.85□□□□□ -0.35
LYSMD1-201ENST00000368908 API5Q9BZZ5 524 aaKnown RBP12.85□□□□□ -0.35
LYSMD1-201ENST00000368908 SYCE3A1L190 88 aa12.85□□□□□ -0.35
LYSMD1-201ENST00000368908 HMGN5P82970 282 aaKnown RBP12.85□□□□□ -0.35
LYSMD1-201ENST00000368908 SYAP1Q96A49 352 aaPredicted RBP12.85□□□□□ -0.35
LYSMD1-201ENST00000368908 TSPY26PQ9H489 355 aa12.85□□□□□ -0.35
LYSMD1-201ENST00000368908 C1orf115Q9H7X2 142 aa12.85□□□□□ -0.35
LYSMD1-201ENST00000368908 ATAD2Q6PL18 1390 aa12.85□□□□□ -0.35
LYSMD1-201ENST00000368908 NRXN3Q9Y4C0 1643 aa12.84□□□□□ -0.35
LYSMD1-201ENST00000368908 REC8O95072 547 aa12.84□□□□□ -0.35
LYSMD1-201ENST00000368908 UVSSAQ2YD98 709 aa12.84□□□□□ -0.35
LYSMD1-201ENST00000368908 IFT57Q9NWB7 429 aa12.84□□□□□ -0.35
LYSMD1-201ENST00000368908 ZGPATQ8N5A5 531 aaKnown RBP12.83□□□□□ -0.36
LYSMD1-201ENST00000368908 CD163L1Q9NR16 1453 aa12.83□□□□□ -0.36
LYSMD1-201ENST00000368908 VGFO15240 615 aaPredicted RBP12.83□□□□□ -0.36
LYSMD1-201ENST00000368908 PHF14O94880 888 aa12.83□□□□□ -0.36
LYSMD1-201ENST00000368908 MCM2P49736 904 aa12.83□□□□□ -0.36
LYSMD1-201ENST00000368908 GNAI1P63096 354 aa12.83□□□□□ -0.36
LYSMD1-201ENST00000368908 FAM184AQ8NB25 1140 aa12.83□□□□□ -0.36
LYSMD1-201ENST00000368908 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.83□□□□□ -0.36
LYSMD1-201ENST00000368908 TUBGCP6Q96RT7 1819 aa12.82□□□□□ -0.36
LYSMD1-201ENST00000368908 ATP10DQ9P241 1426 aa12.82□□□□□ -0.36
LYSMD1-201ENST00000368908 KLHL34Q8N239 644 aa12.82□□□□□ -0.36
LYSMD1-201ENST00000368908 BRD1O95696 1058 aa12.82□□□□□ -0.36
LYSMD1-201ENST00000368908 PTMAP06454 111 aaKnown RBP12.82□□□□□ -0.36
LYSMD1-201ENST00000368908 ZNF853P0CG23 659 aa12.82□□□□□ -0.36
LYSMD1-201ENST00000368908 TMEM132EQ6IEE7 984 aa12.82□□□□□ -0.36
LYSMD1-201ENST00000368908 PIBF1Q8WXW3 757 aa12.82□□□□□ -0.36
LYSMD1-201ENST00000368908 DLG5Q8TDM6 1919 aa12.82□□□□□ -0.36
LYSMD1-201ENST00000368908 SETD1AO15047 1707 aaKnown RBP12.81□□□□□ -0.36
LYSMD1-201ENST00000368908 NFE2L2Q16236 605 aa12.81□□□□□ -0.36
LYSMD1-201ENST00000368908 GTPBP4Q9BZE4 634 aaKnown RBP12.81□□□□□ -0.36
LYSMD1-201ENST00000368908 GGNBP2Q9H3C7 697 aa12.81□□□□□ -0.36
LYSMD1-201ENST00000368908 NWD1Q149M9 1564 aa12.81□□□□□ -0.36
LYSMD1-201ENST00000368908 ADAMTS13Q76LX8 1427 aa12.81□□□□□ -0.36
LYSMD1-201ENST00000368908 FYB1O15117 783 aa12.81□□□□□ -0.36
LYSMD1-201ENST00000368908 TERF2IPQ9NYB0 399 aa12.81□□□□□ -0.36
LYSMD1-201ENST00000368908 ZSCAN20P17040 1043 aaPredicted RBP12.8□□□□□ -0.36
LYSMD1-201ENST00000368908 KCNA4P22459 653 aa12.8□□□□□ -0.36
LYSMD1-201ENST00000368908 CUL4AQ13619 759 aa12.8□□□□□ -0.36
LYSMD1-201ENST00000368908 ANKRD44Q8N8A2 993 aa12.8□□□□□ -0.36
LYSMD1-201ENST00000368908 CABP2Q9NPB3 220 aa12.8□□□□□ -0.36
LYSMD1-201ENST00000368908 NSFL1CQ9UNZ2 370 aaKnown RBP12.8□□□□□ -0.36
LYSMD1-201ENST00000368908 ERC2O15083 957 aa12.8□□□□□ -0.36
LYSMD1-201ENST00000368908 INTS4Q96HW7 963 aaKnown RBP12.8□□□□□ -0.36
LYSMD1-201ENST00000368908 CPSF1Q10570 1443 aaKnown RBP12.8□□□□□ -0.36
LYSMD1-201ENST00000368908 SDSP20132 328 aa12.79□□□□□ -0.36
LYSMD1-201ENST00000368908 RPAP2Q8IXW5 612 aaPredicted RBP12.79□□□□□ -0.36
LYSMD1-201ENST00000368908 SPTLC3Q9NUV7 552 aa12.79□□□□□ -0.36
LYSMD1-201ENST00000368908 TBX22Q9Y458 520 aa12.79□□□□□ -0.36
LYSMD1-201ENST00000368908 CPS1P31327 1500 aa12.79□□□□□ -0.36
LYSMD1-201ENST00000368908 CHD2O14647 1828 aaKnown RBP12.78□□□□□ -0.36
LYSMD1-201ENST00000368908 PRKAR2BP31323 418 aa12.78□□□□□ -0.36
LYSMD1-201ENST00000368908 ZNF710Q8N1W2 664 aa12.78□□□□□ -0.36
LYSMD1-201ENST00000368908 ALKQ9UM73 1620 aa12.78□□□□□ -0.36
LYSMD1-201ENST00000368908 TSPYL6Q8N831 410 aa12.78□□□□□ -0.36
LYSMD1-201ENST00000368908 IL17RAQ96F46 866 aa12.78□□□□□ -0.36
LYSMD1-201ENST00000368908 LTBP4Q8N2S1 1624 aa12.77□□□□□ -0.36
LYSMD1-201ENST00000368908 KIF20AO95235 890 aa12.77□□□□□ -0.37
LYSMD1-201ENST00000368908 TWISTNBQ3B726 338 aaPredicted RBP12.77□□□□□ -0.37
LYSMD1-201ENST00000368908 RNF214Q8ND24 703 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms