RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 SYCE3A1L190 88 aa13.97□□□□□ -0.17
COPA-202ENST00000368069 TPD52L1Q16890 204 aaPredicted RBP13.97□□□□□ -0.17
COPA-202ENST00000368069 TRIM5Q9C035 493 aa13.97□□□□□ -0.17
COPA-202ENST00000368069 MYL6BP14649 208 aa13.97□□□□□ -0.17
COPA-202ENST00000368069 PDRG1Q9NUG6 133 aa13.97□□□□□ -0.17
COPA-202ENST00000368069 ZNF518AQ6AHZ1 1483 aa13.97□□□□□ -0.17
COPA-202ENST00000368069 TATP17735 454 aaPredicted RBP13.97□□□□□ -0.17
COPA-202ENST00000368069 TTC22Q5TAA0 569 aa13.96□□□□□ -0.17
COPA-202ENST00000368069 KIF1BPQ96EK5 621 aa13.96□□□□□ -0.17
COPA-202ENST00000368069 SDF4Q9BRK5 362 aa13.96□□□□□ -0.17
COPA-202ENST00000368069 LRRFIP2Q9Y608 721 aaKnown RBP13.96□□□□□ -0.17
COPA-202ENST00000368069 TARBP1Q13395 1621 aaKnown RBP13.96□□□□□ -0.17
COPA-202ENST00000368069 USHBP1Q8N6Y0 703 aa13.96□□□□□ -0.17
COPA-202ENST00000368069 TAF7Q15545 349 aaPredicted RBP13.96□□□□□ -0.17
COPA-202ENST00000368069 LARP1BQ659C4 914 aaKnown RBP13.96□□□□□ -0.17
COPA-202ENST00000368069 PES1O00541 588 aaKnown RBP13.96□□□□□ -0.18
COPA-202ENST00000368069 PROSER2Q86WR7 435 aaPredicted RBP13.96□□□□□ -0.18
COPA-202ENST00000368069 INSRP06213 1382 aa13.95□□□□□ -0.18
COPA-202ENST00000368069 TPM3P06753 285 aa13.95□□□□□ -0.18
COPA-202ENST00000368069 CEBPZQ03701 1054 aaKnown RBP13.95□□□□□ -0.18
COPA-202ENST00000368069 MRPL50Q8N5N7 158 aaKnown RBP13.95□□□□□ -0.18
COPA-202ENST00000368069 FLIIQ13045 1269 aa13.95□□□□□ -0.18
COPA-202ENST00000368069 ANKRD1Q15327 319 aa13.95□□□□□ -0.18
COPA-202ENST00000368069 BLOC1S2Q6QNY1 142 aa13.95□□□□□ -0.18
COPA-202ENST00000368069 PUS7Q96PZ0 661 aaKnown RBP13.95□□□□□ -0.18
COPA-202ENST00000368069 CASTP20810 708 aaKnown RBP13.95□□□□□ -0.18
COPA-202ENST00000368069 KRT85P78386 507 aa13.95□□□□□ -0.18
COPA-202ENST00000368069 SPC24Q8NBT2 197 aa13.95□□□□□ -0.18
COPA-202ENST00000368069 ABCC2Q92887 1545 aa13.95□□□□□ -0.18
COPA-202ENST00000368069 HOMER1Q86YM7 354 aa13.94□□□□□ -0.18
COPA-202ENST00000368069 CCAR2Q8N163 923 aaKnown RBP13.94□□□□□ -0.18
COPA-202ENST00000368069 CEP170Q5SW79 1584 aa13.94□□□□□ -0.18
COPA-202ENST00000368069 ABCC10Q5T3U5 1492 aa13.94□□□□□ -0.18
COPA-202ENST00000368069 RAB11FIP3O75154 756 aa13.94□□□□□ -0.18
COPA-202ENST00000368069 XPCQ01831 940 aaPredicted RBP13.94□□□□□ -0.18
COPA-202ENST00000368069 C8orf58Q8NAV2 365 aa13.94□□□□□ -0.18
COPA-202ENST00000368069 POLKQ9UBT6 870 aa13.94□□□□□ -0.18
COPA-202ENST00000368069 A0A1W2PP64 1363 aa13.94□□□□□ -0.18
COPA-202ENST00000368069 KINO60870 393 aaKnown RBP13.94□□□□□ -0.18
COPA-202ENST00000368069 CCDC192P0DO97 292 aa13.94□□□□□ -0.18
COPA-202ENST00000368069 KDM5CP41229 1560 aa13.94□□□□□ -0.18
COPA-202ENST00000368069 ZSCAN30Q86W11 494 aa13.93□□□□□ -0.18
COPA-202ENST00000368069 ZSCAN31Q96LW9 406 aaPredicted RBP13.93□□□□□ -0.18
COPA-202ENST00000368069 TTC21BQ7Z4L5 1316 aa13.93□□□□□ -0.18
COPA-202ENST00000368069 RBM10P98175 930 aaKnown RBP13.93□□□□□ -0.18
COPA-202ENST00000368069 TSHZ3Q63HK5 1081 aa13.93□□□□□ -0.18
COPA-202ENST00000368069 GLRX3O76003 335 aaKnown RBP13.93□□□□□ -0.18
COPA-202ENST00000368069 BAG4O95429 457 aaKnown RBP13.93□□□□□ -0.18
COPA-202ENST00000368069 MEIS3Q99687 375 aa13.93□□□□□ -0.18
COPA-202ENST00000368069 NAT10Q9H0A0 1025 aaKnown RBP13.93□□□□□ -0.18
COPA-202ENST00000368069 AMOTL2Q9Y2J4 779 aa13.93□□□□□ -0.18
COPA-202ENST00000368069 ACEP12821 1306 aa13.92□□□□□ -0.18
COPA-202ENST00000368069 ZBTB40Q9NUA8 1239 aa13.92□□□□□ -0.18
COPA-202ENST00000368069 ZRANB1Q9UGI0 708 aa13.92□□□□□ -0.18
COPA-202ENST00000368069 TSPYL6Q8N831 410 aa13.92□□□□□ -0.18
COPA-202ENST00000368069 BCL11BQ9C0K0 894 aaPredicted RBP13.92□□□□□ -0.18
COPA-202ENST00000368069 HOOK1Q9UJC3 728 aaKnown RBP13.92□□□□□ -0.18
COPA-202ENST00000368069 KDM4AO75164 1064 aa13.92□□□□□ -0.18
COPA-202ENST00000368069 SAFBQ15424 915 aaKnown RBP eCLIP13.92□□□□□ -0.18
COPA-202ENST00000368069 SMC5Q8IY18 1101 aa13.92□□□□□ -0.18
COPA-202ENST00000368069 TNMDQ9H2S6 317 aa13.92□□□□□ -0.18
COPA-202ENST00000368069 ERICH2A1L162 156 aa13.91□□□□□ -0.18
COPA-202ENST00000368069 PRPF40BQ6NWY9 871 aaKnown RBP13.91□□□□□ -0.18
COPA-202ENST00000368069 TPM1P09493 284 aa13.91□□□□□ -0.18
COPA-202ENST00000368069 HSP90AB2PQ58FF8 381 aa13.91□□□□□ -0.18
COPA-202ENST00000368069 CCDC83Q8IWF9 413 aa13.91□□□□□ -0.18
COPA-202ENST00000368069 VAMP4O75379 141 aa13.91□□□□□ -0.18
COPA-202ENST00000368069 CABP4P57796 275 aa13.91□□□□□ -0.18
COPA-202ENST00000368069 MAP7D2Q96T17 732 aa13.91□□□□□ -0.18
COPA-202ENST00000368069 SDSP20132 328 aa13.91□□□□□ -0.18
COPA-202ENST00000368069 PPIP5K1Q6PFW1 1433 aa13.9□□□□□ -0.18
COPA-202ENST00000368069 ANKLE2Q86XL3 938 aa13.9□□□□□ -0.18
COPA-202ENST00000368069 PHACTR3Q96KR7 559 aa13.9□□□□□ -0.18
COPA-202ENST00000368069 ANKRD44Q8N8A2 993 aa13.9□□□□□ -0.18
COPA-202ENST00000368069 DNAAF4Q8WXU2 420 aa13.9□□□□□ -0.18
COPA-202ENST00000368069 ZNF396Q96N95 335 aaPredicted RBP13.9□□□□□ -0.18
COPA-202ENST00000368069 RBM42Q9BTD8 480 aaKnown RBP13.9□□□□□ -0.18
COPA-202ENST00000368069 SPG7Q9UQ90 795 aa13.9□□□□□ -0.18
COPA-202ENST00000368069 VPS37DQ86XT2 251 aa13.9□□□□□ -0.18
COPA-202ENST00000368069 DDX54Q8TDD1 881 aaKnown RBP13.9□□□□□ -0.18
COPA-202ENST00000368069 ARHGEF5Q12774 1597 aa13.9□□□□□ -0.18
COPA-202ENST00000368069 KCNH5Q8NCM2 988 aa13.89□□□□□ -0.19
COPA-202ENST00000368069 SPATA32Q96LK8 384 aa13.89□□□□□ -0.19
COPA-202ENST00000368069 PPP6R1Q9UPN7 881 aa13.89□□□□□ -0.19
COPA-202ENST00000368069 MBD5Q9P267 1494 aa13.89□□□□□ -0.19
COPA-202ENST00000368069 HMGN5P82970 282 aaKnown RBP13.89□□□□□ -0.19
COPA-202ENST00000368069 STK38Q15208 465 aa13.89□□□□□ -0.19
COPA-202ENST00000368069 MTERF4Q7Z6M4 381 aaKnown RBP13.89□□□□□ -0.19
COPA-202ENST00000368069 FERMT3Q86UX7 667 aa13.89□□□□□ -0.19
COPA-202ENST00000368069 SNX21Q969T3 373 aa13.89□□□□□ -0.19
COPA-202ENST00000368069 TSR1Q2NL82 804 aaKnown RBP13.89□□□□□ -0.19
COPA-202ENST00000368069 POGZQ7Z3K3 1410 aa13.89□□□□□ -0.19
COPA-202ENST00000368069 ZC3H6P61129 1189 aaKnown RBP13.88□□□□□ -0.19
COPA-202ENST00000368069 TTC39AQ5SRH9 613 aa13.88□□□□□ -0.19
COPA-202ENST00000368069 C16orf71Q8IYS4 520 aaPredicted RBP13.88□□□□□ -0.19
COPA-202ENST00000368069 FMNL2Q96PY5 1086 aa13.88□□□□□ -0.19
COPA-202ENST00000368069 CCDC158Q5M9N0 1113 aa13.88□□□□□ -0.19
COPA-202ENST00000368069 MPRIPQ6WCQ1 1025 aa13.88□□□□□ -0.19
COPA-202ENST00000368069 GOLGA6L1Q8N7Z2 621 aa13.88□□□□□ -0.19
COPA-202ENST00000368069 NUP62CLQ9H1M0 184 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms