RNA–Protein interactions for RNA: ENST00000368012.3

NECTIN4-201, Transcript of nectin cell adhesion molecule 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NECTIN4, Length 3,502 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4-201ENST00000368012 HSP90AB2PQ58FF8 381 aa13.43□□□□□ -0.26
NECTIN4-201ENST00000368012 G2E3Q7L622 706 aa13.43□□□□□ -0.26
NECTIN4-201ENST00000368012 IFT57Q9NWB7 429 aa13.43□□□□□ -0.26
NECTIN4-201ENST00000368012 PPRC1Q5VV67 1664 aaKnown RBP13.42□□□□□ -0.26
NECTIN4-201ENST00000368012 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.42□□□□□ -0.26
NECTIN4-201ENST00000368012 NGDNQ8NEJ9 315 aaKnown RBP13.42□□□□□ -0.26
NECTIN4-201ENST00000368012 USP26Q9BXU7 913 aa13.42□□□□□ -0.26
NECTIN4-201ENST00000368012 IL16Q14005 1332 aa13.42□□□□□ -0.26
NECTIN4-201ENST00000368012 ZMYM3Q14202 1370 aa13.42□□□□□ -0.26
NECTIN4-201ENST00000368012 JARID2Q92833 1246 aaPredicted RBP13.42□□□□□ -0.26
NECTIN4-201ENST00000368012 NUDT16Q96DE0 195 aaKnown RBP13.42□□□□□ -0.26
NECTIN4-201ENST00000368012 NAP1L2Q9ULW6 460 aaPredicted RBP13.42□□□□□ -0.26
NECTIN4-201ENST00000368012 TULP4Q9NRJ4 1543 aa13.42□□□□□ -0.26
NECTIN4-201ENST00000368012 TSC1Q92574 1164 aa13.42□□□□□ -0.26
NECTIN4-201ENST00000368012 NSFL1CQ9UNZ2 370 aaKnown RBP13.42□□□□□ -0.26
NECTIN4-201ENST00000368012 QRICH2Q9H0J4 1663 aa13.41□□□□□ -0.26
NECTIN4-201ENST00000368012 VPS37CA5D8V6 355 aaPredicted RBP13.41□□□□□ -0.26
NECTIN4-201ENST00000368012 SURF6O75683 361 aaKnown RBP13.41□□□□□ -0.26
NECTIN4-201ENST00000368012 KIAA2012Q0VF49 1180 aa13.41□□□□□ -0.26
NECTIN4-201ENST00000368012 DRC7Q8IY82 874 aa13.41□□□□□ -0.26
NECTIN4-201ENST00000368012 PODXL2Q9NZ53 605 aa13.41□□□□□ -0.26
NECTIN4-201ENST00000368012 SPC24Q8NBT2 197 aa13.41□□□□□ -0.26
NECTIN4-201ENST00000368012 UHRF1BP1LA0JNW5 1464 aa13.41□□□□□ -0.26
NECTIN4-201ENST00000368012 VWDEQ8N2E2 1590 aa13.4□□□□□ -0.26
NECTIN4-201ENST00000368012 TMX3Q96JJ7 454 aa13.4□□□□□ -0.26
NECTIN4-201ENST00000368012 NRXN1Q9ULB1 1477 aa13.4□□□□□ -0.26
NECTIN4-201ENST00000368012 ADGRB1O14514 1584 aa13.4□□□□□ -0.26
NECTIN4-201ENST00000368012 DCTPP1Q9H773 170 aa13.4□□□□□ -0.26
NECTIN4-201ENST00000368012 MROH1Q8NDA8 1641 aa13.4□□□□□ -0.26
NECTIN4-201ENST00000368012 KIAA1210Q9ULL0 1709 aa13.4□□□□□ -0.26
NECTIN4-201ENST00000368012 DEPDC5O75140 1603 aa13.4□□□□□ -0.26
NECTIN4-201ENST00000368012 VIRMAQ69YN4 1812 aaKnown RBP13.4□□□□□ -0.26
NECTIN4-201ENST00000368012 CEP85Q6P2H3 762 aa13.39□□□□□ -0.27
NECTIN4-201ENST00000368012 C17orf53Q8N3J3 647 aaPredicted RBP13.39□□□□□ -0.27
NECTIN4-201ENST00000368012 ADGRB3O60242 1522 aa13.39□□□□□ -0.27
NECTIN4-201ENST00000368012 FOSBP53539 338 aa13.39□□□□□ -0.27
NECTIN4-201ENST00000368012 LMBRD1Q9NUN5 540 aa13.39□□□□□ -0.27
NECTIN4-201ENST00000368012 INO80Q9ULG1 1556 aaPredicted RBP13.39□□□□□ -0.27
NECTIN4-201ENST00000368012 SLC26A8Q96RN1 970 aa13.39□□□□□ -0.27
NECTIN4-201ENST00000368012 PDCL3Q9H2J4 239 aa13.39□□□□□ -0.27
NECTIN4-201ENST00000368012 TMEM63CQ9P1W3 806 aa13.39□□□□□ -0.27
NECTIN4-201ENST00000368012 USP25Q9UHP3 1055 aa13.39□□□□□ -0.27
NECTIN4-201ENST00000368012 ISY1Q9ULR0 285 aaKnown RBP13.39□□□□□ -0.27
NECTIN4-201ENST00000368012 ANXA1P04083 346 aa13.38□□□□□ -0.27
NECTIN4-201ENST00000368012 CPA1P15085 419 aa13.38□□□□□ -0.27
NECTIN4-201ENST00000368012 HAP1P54257 671 aaPredicted RBP13.38□□□□□ -0.27
NECTIN4-201ENST00000368012 RPAP2Q8IXW5 612 aaPredicted RBP13.38□□□□□ -0.27
NECTIN4-201ENST00000368012 SLC52A1Q9NWF4 448 aa13.38□□□□□ -0.27
NECTIN4-201ENST00000368012 TPM2P07951 284 aa13.38□□□□□ -0.27
NECTIN4-201ENST00000368012 ANKRD44Q8N8A2 993 aa13.38□□□□□ -0.27
NECTIN4-201ENST00000368012 GOLGA6L4A6NEF3 574 aa13.38□□□□□ -0.27
NECTIN4-201ENST00000368012 GNAI2P04899 355 aa13.38□□□□□ -0.27
NECTIN4-201ENST00000368012 DDIT3P35638 169 aa13.38□□□□□ -0.27
NECTIN4-201ENST00000368012 CWC27Q6UX04 472 aaKnown RBP13.38□□□□□ -0.27
NECTIN4-201ENST00000368012 SYAP1Q96A49 352 aaPredicted RBP13.38□□□□□ -0.27
NECTIN4-201ENST00000368012 LRRCC1Q9C099 1032 aa13.38□□□□□ -0.27
NECTIN4-201ENST00000368012 GPT2Q8TD30 523 aa13.37□□□□□ -0.27
NECTIN4-201ENST00000368012 FBXW7Q969H0 707 aa13.37□□□□□ -0.27
NECTIN4-201ENST00000368012 TSPY26PQ9H489 355 aa13.37□□□□□ -0.27
NECTIN4-201ENST00000368012 FERMT3Q86UX7 667 aa13.37□□□□□ -0.27
NECTIN4-201ENST00000368012 USHBP1Q8N6Y0 703 aa13.37□□□□□ -0.27
NECTIN4-201ENST00000368012 SPG7Q9UQ90 795 aa13.37□□□□□ -0.27
NECTIN4-201ENST00000368012 PDE1AP54750 535 aa13.36□□□□□ -0.27
NECTIN4-201ENST00000368012 FAM69CQ0P6D2 419 aa13.36□□□□□ -0.27
NECTIN4-201ENST00000368012 PALD1Q9ULE6 856 aa13.36□□□□□ -0.27
NECTIN4-201ENST00000368012 PUS7Q96PZ0 661 aaKnown RBP13.36□□□□□ -0.27
NECTIN4-201ENST00000368012 CWC22Q9HCG8 908 aaKnown RBP13.36□□□□□ -0.27
NECTIN4-201ENST00000368012 LRRFIP2Q9Y608 721 aaKnown RBP13.36□□□□□ -0.27
NECTIN4-201ENST00000368012 IL13P35225 146 aa13.36□□□□□ -0.27
NECTIN4-201ENST00000368012 RBM33Q96EV2 1170 aaKnown RBP13.36□□□□□ -0.27
NECTIN4-201ENST00000368012 DNAJC5Q9H3Z4 198 aa13.36□□□□□ -0.27
NECTIN4-201ENST00000368012 CCDC61Q9Y6R9 512 aa13.36□□□□□ -0.27
NECTIN4-201ENST00000368012 GLI2P10070 1586 aa13.35□□□□□ -0.27
NECTIN4-201ENST00000368012 GADD45BO75293 160 aaPredicted RBP13.35□□□□□ -0.27
NECTIN4-201ENST00000368012 ARHGAP45Q92619 1136 aa13.35□□□□□ -0.27
NECTIN4-201ENST00000368012 TTC12Q9H892 705 aaPredicted RBP13.35□□□□□ -0.27
NECTIN4-201ENST00000368012 UBTFL1P0CB47 393 aaPredicted RBP13.35□□□□□ -0.27
NECTIN4-201ENST00000368012 MX1P20591 662 aa13.35□□□□□ -0.27
NECTIN4-201ENST00000368012 FGD1P98174 961 aa13.35□□□□□ -0.27
NECTIN4-201ENST00000368012 NCBP3Q53F19 620 aaKnown RBP13.35□□□□□ -0.27
NECTIN4-201ENST00000368012 AK9Q5TCS8 1911 aa13.35□□□□□ -0.27
NECTIN4-201ENST00000368012 EIF4A2Q14240 407 aaKnown RBP13.35□□□□□ -0.27
NECTIN4-201ENST00000368012 MSH6P52701 1360 aa13.35□□□□□ -0.27
NECTIN4-201ENST00000368012 HCLS1P14317 486 aaPredicted RBP13.34□□□□□ -0.27
NECTIN4-201ENST00000368012 SMC3Q9UQE7 1217 aa13.34□□□□□ -0.27
NECTIN4-201ENST00000368012 SETBP1Q9Y6X0 1596 aa13.34□□□□□ -0.27
NECTIN4-201ENST00000368012 WASLO00401 505 aaPredicted RBP13.34□□□□□ -0.27
NECTIN4-201ENST00000368012 PPFIA3O75145 1194 aa13.34□□□□□ -0.27
NECTIN4-201ENST00000368012 TCEANC2Q96MN5 208 aa13.34□□□□□ -0.27
NECTIN4-201ENST00000368012 CCDC39Q9UFE4 941 aa13.34□□□□□ -0.27
NECTIN4-201ENST00000368012 CAMK4Q16566 473 aa13.33□□□□□ -0.28
NECTIN4-201ENST00000368012 KIDINS220Q9ULH0 1771 aa13.33□□□□□ -0.28
NECTIN4-201ENST00000368012 IGSF3O75054 1194 aa13.33□□□□□ -0.28
NECTIN4-201ENST00000368012 NLRP6P59044 892 aa13.33□□□□□ -0.28
NECTIN4-201ENST00000368012 AIMP1Q12904 312 aaKnown RBP13.33□□□□□ -0.28
NECTIN4-201ENST00000368012 STK3Q13188 491 aa13.33□□□□□ -0.28
NECTIN4-201ENST00000368012 DIAPH3Q9NSV4 1193 aa13.33□□□□□ -0.28
NECTIN4-201ENST00000368012 PNMA6EA0A0J9YXQ4 647 aa13.33□□□□□ -0.28
NECTIN4-201ENST00000368012 CNPY2Q9Y2B0 182 aa13.33□□□□□ -0.28
NECTIN4-201ENST00000368012 YTHDC2Q9H6S0 1430 aaKnown RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms