RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 PRIM1P49642 420 aaKnown RBP16.75■□□□□ 0.27
PRKN-205ENST00000366897 LMBRD1Q9NUN5 540 aa16.75■□□□□ 0.27
PRKN-205ENST00000366897 PNPLA6Q8IY17 1366 aa16.75■□□□□ 0.27
PRKN-205ENST00000366897 LTKP29376 864 aa16.75■□□□□ 0.27
PRKN-205ENST00000366897 TTC22Q5TAA0 569 aa16.75■□□□□ 0.27
PRKN-205ENST00000366897 ARID3AQ99856 593 aa16.75■□□□□ 0.27
PRKN-205ENST00000366897 USP26Q9BXU7 913 aa16.75■□□□□ 0.27
PRKN-205ENST00000366897 ZNF335Q9H4Z2 1342 aaPredicted RBP16.75■□□□□ 0.27
PRKN-205ENST00000366897 GNAI1P63096 354 aa16.75■□□□□ 0.27
PRKN-205ENST00000366897 RRS1Q15050 365 aaKnown RBP16.75■□□□□ 0.27
PRKN-205ENST00000366897 CERKQ8TCT0 537 aa16.75■□□□□ 0.27
PRKN-205ENST00000366897 FAM135BQ49AJ0 1406 aa16.74■□□□□ 0.27
PRKN-205ENST00000366897 RABEP1Q15276 862 aa16.74■□□□□ 0.27
PRKN-205ENST00000366897 ILDR1Q86SU0 546 aaPredicted RBP16.74■□□□□ 0.27
PRKN-205ENST00000366897 NEXMIFQ5QGS0 1516 aa16.74■□□□□ 0.27
PRKN-205ENST00000366897 XPCQ01831 940 aaPredicted RBP16.74■□□□□ 0.27
PRKN-205ENST00000366897 NOL8Q76FK4 1167 aaKnown RBP16.74■□□□□ 0.27
PRKN-205ENST00000366897 TXNDC2Q86VQ3 553 aa16.74■□□□□ 0.27
PRKN-205ENST00000366897 NME9Q86XW9 330 aa16.74■□□□□ 0.27
PRKN-205ENST00000366897 NSFL1CQ9UNZ2 370 aaKnown RBP16.74■□□□□ 0.27
PRKN-205ENST00000366897 PTCH1Q13635 1447 aa16.73■□□□□ 0.27
PRKN-205ENST00000366897 SDSP20132 328 aa16.73■□□□□ 0.27
PRKN-205ENST00000366897 FOXD4L6Q3SYB3 417 aaPredicted RBP16.73■□□□□ 0.27
PRKN-205ENST00000366897 FOXD4L3Q6VB84 417 aaPredicted RBP16.73■□□□□ 0.27
PRKN-205ENST00000366897 ARHGAP45Q92619 1136 aa16.73■□□□□ 0.27
PRKN-205ENST00000366897 R3HCC1Q9Y3T6 440 aaKnown RBP16.73■□□□□ 0.27
PRKN-205ENST00000366897 TMEM2Q9UHN6 1383 aa16.73■□□□□ 0.27
PRKN-205ENST00000366897 PTMSP20962 102 aa16.73■□□□□ 0.27
PRKN-205ENST00000366897 BRPF1P55201 1214 aaPredicted RBP16.73■□□□□ 0.27
PRKN-205ENST00000366897 TSHZ3Q63HK5 1081 aa16.73■□□□□ 0.27
PRKN-205ENST00000366897 RNF214Q8ND24 703 aa16.72■□□□□ 0.27
PRKN-205ENST00000366897 GPT2Q8TD30 523 aa16.72■□□□□ 0.27
PRKN-205ENST00000366897 IFT57Q9NWB7 429 aa16.72■□□□□ 0.27
PRKN-205ENST00000366897 NPHP4O75161 1426 aaPredicted RBP16.72■□□□□ 0.27
PRKN-205ENST00000366897 ARHGAP23Q9P227 1491 aa16.72■□□□□ 0.27
PRKN-205ENST00000366897 DCTPP1Q9H773 170 aa16.71■□□□□ 0.27
PRKN-205ENST00000366897 ZDHHC9Q9Y397 364 aa16.71■□□□□ 0.27
PRKN-205ENST00000366897 SLIT1O75093 1534 aa16.71■□□□□ 0.27
PRKN-205ENST00000366897 PIK3R4Q99570 1358 aa16.71■□□□□ 0.27
PRKN-205ENST00000366897 ZNF428Q96B54 188 aa16.71■□□□□ 0.27
PRKN-205ENST00000366897 EID1Q9Y6B2 187 aa16.71■□□□□ 0.27
PRKN-205ENST00000366897 YTHDC2Q9H6S0 1430 aaKnown RBP16.71■□□□□ 0.27
PRKN-205ENST00000366897 TPRNQ4KMQ1 711 aa16.71■□□□□ 0.26
PRKN-205ENST00000366897 API5Q9BZZ5 524 aaKnown RBP16.71■□□□□ 0.26
PRKN-205ENST00000366897 CHMP4BQ9H444 224 aaKnown RBP16.71■□□□□ 0.26
PRKN-205ENST00000366897 TPM2P07951 284 aa16.7■□□□□ 0.26
PRKN-205ENST00000366897 ZNF853P0CG23 659 aa16.7■□□□□ 0.26
PRKN-205ENST00000366897 CLEC17AQ6ZS10 378 aa16.7■□□□□ 0.26
PRKN-205ENST00000366897 MPNDQ8N594 471 aa16.7■□□□□ 0.26
PRKN-205ENST00000366897 SYCE3A1L190 88 aa16.7■□□□□ 0.26
PRKN-205ENST00000366897 CYP2E1P05181 493 aaPredicted RBP16.7■□□□□ 0.26
PRKN-205ENST00000366897 NUCB2P80303 420 aa16.7■□□□□ 0.26
PRKN-205ENST00000366897 LTBP4Q8N2S1 1624 aa16.7■□□□□ 0.26
PRKN-205ENST00000366897 OFD1O75665 1012 aa16.69■□□□□ 0.26
PRKN-205ENST00000366897 IL13P35225 146 aa16.69■□□□□ 0.26
PRKN-205ENST00000366897 ZNF445P59923 1031 aa16.69■□□□□ 0.26
PRKN-205ENST00000366897 INTS3Q68E01 1043 aaKnown RBP16.69■□□□□ 0.26
PRKN-205ENST00000366897 MEIS3Q99687 375 aa16.69■□□□□ 0.26
PRKN-205ENST00000366897 AEBP1Q8IUX7 1158 aa16.69■□□□□ 0.26
PRKN-205ENST00000366897 CFAP44Q96MT7 982 aa16.69■□□□□ 0.26
PRKN-205ENST00000366897 FAM13BQ9NYF5 915 aa16.69■□□□□ 0.26
PRKN-205ENST00000366897 TMEM63CQ9P1W3 806 aa16.69■□□□□ 0.26
PRKN-205ENST00000366897 FBXO41Q8TF61 875 aa16.68■□□□□ 0.26
PRKN-205ENST00000366897 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.68■□□□□ 0.26
PRKN-205ENST00000366897 KNDC1Q76NI1 1749 aa16.67■□□□□ 0.26
PRKN-205ENST00000366897 CEP85Q6P2H3 762 aa16.67■□□□□ 0.26
PRKN-205ENST00000366897 MCM10Q7L590 875 aa16.67■□□□□ 0.26
PRKN-205ENST00000366897 MIS18AQ9NYP9 233 aa16.67■□□□□ 0.26
PRKN-205ENST00000366897 ANKRD44Q8N8A2 993 aa16.66■□□□□ 0.26
PRKN-205ENST00000366897 ST18O60284 1047 aa16.66■□□□□ 0.26
PRKN-205ENST00000366897 TMEM131LA2VDJ0 1609 aa16.66■□□□□ 0.26
PRKN-205ENST00000366897 ZFYVE9O95405 1425 aa16.65■□□□□ 0.26
PRKN-205ENST00000366897 SLC4A10Q6U841 1118 aa16.65■□□□□ 0.26
PRKN-205ENST00000366897 MSH6P52701 1360 aa16.65■□□□□ 0.26
PRKN-205ENST00000366897 IBTKQ9P2D0 1353 aaPredicted RBP16.65■□□□□ 0.26
PRKN-205ENST00000366897 NEK4P51957 841 aa16.65■□□□□ 0.26
PRKN-205ENST00000366897 MYO5BQ9ULV0 1848 aa16.64■□□□□ 0.25
PRKN-205ENST00000366897 F6X3S4 739 aa16.64■□□□□ 0.25
PRKN-205ENST00000366897 SOX12O15370 315 aa16.64■□□□□ 0.25
PRKN-205ENST00000366897 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.64■□□□□ 0.25
PRKN-205ENST00000366897 GDPD2Q9HCC8 539 aa16.64■□□□□ 0.25
PRKN-205ENST00000366897 ATP10DQ9P241 1426 aa16.64■□□□□ 0.25
PRKN-205ENST00000366897 RIMS2Q9UQ26 1411 aa16.64■□□□□ 0.25
PRKN-205ENST00000366897 PDCL3Q9H2J4 239 aa16.63■□□□□ 0.25
PRKN-205ENST00000366897 CASC1Q6TDU7 716 aa16.62■□□□□ 0.25
PRKN-205ENST00000366897 NOL7Q9UMY1 257 aaKnown RBP16.62■□□□□ 0.25
PRKN-205ENST00000366897 EXOC6BQ9Y2D4 811 aa16.62■□□□□ 0.25
PRKN-205ENST00000366897 SLC26A8Q96RN1 970 aa16.62■□□□□ 0.25
PRKN-205ENST00000366897 MAP2P11137 1827 aaKnown RBP16.61■□□□□ 0.25
PRKN-205ENST00000366897 SULT6B1Q6IMI4 303 aa16.61■□□□□ 0.25
PRKN-205ENST00000366897 TMX3Q96JJ7 454 aa16.61■□□□□ 0.25
PRKN-205ENST00000366897 PDLIM2Q96JY6 352 aa16.61■□□□□ 0.25
PRKN-205ENST00000366897 PALD1Q9ULE6 856 aa16.61■□□□□ 0.25
PRKN-205ENST00000366897 ANKRD26Q9UPS8 1709 aa16.61■□□□□ 0.25
PRKN-205ENST00000366897 UQCRHLA0A096LP55 91 aa16.61■□□□□ 0.25
PRKN-205ENST00000366897 ERC2O15083 957 aa16.61■□□□□ 0.25
PRKN-205ENST00000366897 UQCRHP07919 91 aa16.61■□□□□ 0.25
PRKN-205ENST00000366897 CWC22Q9HCG8 908 aaKnown RBP16.61■□□□□ 0.25
PRKN-205ENST00000366897 RTL1A6NKG5 1358 aa16.61■□□□□ 0.25
PRKN-205ENST00000366897 DTNBO60941 627 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms