RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 ABTB2Q8N961 1025 aa18.49■□□□□ 0.55
PRKN-204ENST00000366896 ALS2Q96Q42 1657 aa18.48■□□□□ 0.55
PRKN-204ENST00000366896 IPO8O15397 1037 aaKnown RBP18.48■□□□□ 0.55
PRKN-204ENST00000366896 FCHSD2O94868 740 aa18.48■□□□□ 0.55
PRKN-204ENST00000366896 TMEM57Q8N5G2 664 aa18.48■□□□□ 0.55
PRKN-204ENST00000366896 SBNO1A3KN83 1393 aa18.48■□□□□ 0.55
PRKN-204ENST00000366896 MCM4P33991 863 aa18.47■□□□□ 0.55
PRKN-204ENST00000366896 FBLN1P23142 703 aa18.47■□□□□ 0.55
PRKN-204ENST00000366896 NLRP6P59044 892 aa18.47■□□□□ 0.55
PRKN-204ENST00000366896 CERKQ8TCT0 537 aa18.47■□□□□ 0.55
PRKN-204ENST00000366896 NUTM2GQ5VZR2 741 aa18.46■□□□□ 0.55
PRKN-204ENST00000366896 SOS2Q07890 1332 aaPredicted RBP18.46■□□□□ 0.55
PRKN-204ENST00000366896 TOM1O60784 492 aa18.46■□□□□ 0.55
PRKN-204ENST00000366896 CLCN1P35523 988 aa18.46■□□□□ 0.55
PRKN-204ENST00000366896 ZBTB40Q9NUA8 1239 aa18.46■□□□□ 0.55
PRKN-204ENST00000366896 AATKQ6ZMQ8 1374 aa18.45■□□□□ 0.54
PRKN-204ENST00000366896 MAP2P11137 1827 aaKnown RBP18.44■□□□□ 0.54
PRKN-204ENST00000366896 TNS3Q68CZ2 1445 aa18.44■□□□□ 0.54
PRKN-204ENST00000366896 MFAP1P55081 439 aaKnown RBP18.44■□□□□ 0.54
PRKN-204ENST00000366896 AHDC1Q5TGY3 1603 aaPredicted RBP18.43■□□□□ 0.54
PRKN-204ENST00000366896 SPATA31A3Q5VYP0 1347 aa18.43■□□□□ 0.54
PRKN-204ENST00000366896 UBAP1LF5GYI3 381 aa18.42■□□□□ 0.54
PRKN-204ENST00000366896 PRKAR2BP31323 418 aa18.42■□□□□ 0.54
PRKN-204ENST00000366896 SPRYD3Q8NCJ5 442 aa18.42■□□□□ 0.54
PRKN-204ENST00000366896 PANK2Q9BZ23 570 aa18.42■□□□□ 0.54
PRKN-204ENST00000366896 LMOD2Q6P5Q4 547 aa18.42■□□□□ 0.54
PRKN-204ENST00000366896 CHMP4BQ9H444 224 aaKnown RBP18.42■□□□□ 0.54
PRKN-204ENST00000366896 C22orf23Q9BZE7 217 aa18.41■□□□□ 0.54
PRKN-204ENST00000366896 CHMP5Q9NZZ3 219 aa18.41■□□□□ 0.54
PRKN-204ENST00000366896 POLKQ9UBT6 870 aa18.41■□□□□ 0.54
PRKN-204ENST00000366896 CALD1Q05682 793 aaKnown RBP18.41■□□□□ 0.54
PRKN-204ENST00000366896 ARHGAP45Q92619 1136 aa18.41■□□□□ 0.54
PRKN-204ENST00000366896 SLIT3O75094 1523 aa18.4■□□□□ 0.54
PRKN-204ENST00000366896 ARXQ96QS3 562 aa18.4■□□□□ 0.54
PRKN-204ENST00000366896 THUMPD2Q9BTF0 503 aaKnown RBP18.4■□□□□ 0.54
PRKN-204ENST00000366896 SOX12O15370 315 aa18.39■□□□□ 0.53
PRKN-204ENST00000366896 TRAK2O60296 914 aa18.39■□□□□ 0.53
PRKN-204ENST00000366896 PIP4K2BP78356 416 aa18.39■□□□□ 0.53
PRKN-204ENST00000366896 ARHGEF10O15013 1369 aa18.39■□□□□ 0.53
PRKN-204ENST00000366896 MED1Q15648 1581 aaPredicted RBP18.39■□□□□ 0.53
PRKN-204ENST00000366896 HMOX1P09601 288 aa18.39■□□□□ 0.53
PRKN-204ENST00000366896 MRE11P49959 708 aa18.39■□□□□ 0.53
PRKN-204ENST00000366896 NUCB1Q02818 461 aa18.39■□□□□ 0.53
PRKN-204ENST00000366896 RRS1Q15050 365 aaKnown RBP18.39■□□□□ 0.53
PRKN-204ENST00000366896 PHACTR3Q96KR7 559 aa18.39■□□□□ 0.53
PRKN-204ENST00000366896 GZF1Q9H116 711 aaPredicted RBP18.39■□□□□ 0.53
PRKN-204ENST00000366896 EMILIN1Q9Y6C2 1016 aa18.39■□□□□ 0.53
PRKN-204ENST00000366896 NFAT5O94916 1531 aa18.38■□□□□ 0.53
PRKN-204ENST00000366896 NAP1L5Q96NT1 182 aaPredicted RBP18.38■□□□□ 0.53
PRKN-204ENST00000366896 CRYBG1Q9Y4K1 1723 aa18.37■□□□□ 0.53
PRKN-204ENST00000366896 GLIPR1L2Q4G1C9 344 aa18.37■□□□□ 0.53
PRKN-204ENST00000366896 CDK12Q9NYV4 1490 aaPredicted RBP18.36■□□□□ 0.53
PRKN-204ENST00000366896 PEAK1Q9H792 1746 aa18.36■□□□□ 0.53
PRKN-204ENST00000366896 NFE2L2Q16236 605 aa18.36■□□□□ 0.53
PRKN-204ENST00000366896 LNPKQ9C0E8 428 aa18.36■□□□□ 0.53
PRKN-204ENST00000366896 PHRF1Q9P1Y6 1649 aaKnown RBP18.36■□□□□ 0.53
PRKN-204ENST00000366896 PHLPP1O60346 1717 aa18.36■□□□□ 0.53
PRKN-204ENST00000366896 RBM25P49756 843 aaKnown RBP18.35■□□□□ 0.53
PRKN-204ENST00000366896 MAP3K19Q56UN5 1328 aa18.35■□□□□ 0.53
PRKN-204ENST00000366896 KCNH5Q8NCM2 988 aa18.35■□□□□ 0.53
PRKN-204ENST00000366896 TSPYL6Q8N831 410 aa18.34■□□□□ 0.53
PRKN-204ENST00000366896 ISY1Q9ULR0 285 aaKnown RBP18.34■□□□□ 0.53
PRKN-204ENST00000366896 COL16A1Q07092 1604 aaPredicted RBP18.34■□□□□ 0.53
PRKN-204ENST00000366896 PLEKHG5O94827 1062 aa18.34■□□□□ 0.53
PRKN-204ENST00000366896 GCP02774 474 aa18.34■□□□□ 0.53
PRKN-204ENST00000366896 IFT57Q9NWB7 429 aa18.34■□□□□ 0.53
PRKN-204ENST00000366896 LTN1O94822 1766 aa18.34■□□□□ 0.53
PRKN-204ENST00000366896 GCC1Q96CN9 775 aa18.33■□□□□ 0.53
PRKN-204ENST00000366896 DDX11L8A8MPP1 907 aa18.33■□□□□ 0.52
PRKN-204ENST00000366896 ZNF853P0CG23 659 aa18.33■□□□□ 0.52
PRKN-204ENST00000366896 SNX21Q969T3 373 aa18.33■□□□□ 0.52
PRKN-204ENST00000366896 C1orf115Q9H7X2 142 aa18.33■□□□□ 0.52
PRKN-204ENST00000366896 GNAI1P63096 354 aa18.32■□□□□ 0.52
PRKN-204ENST00000366896 LRRC59Q96AG4 307 aaKnown RBP18.32■□□□□ 0.52
PRKN-204ENST00000366896 GRPEL1Q9HAV7 217 aa18.32■□□□□ 0.52
PRKN-204ENST00000366896 VAMP4O75379 141 aa18.32■□□□□ 0.52
PRKN-204ENST00000366896 BMP2KLQ5H9B9 411 aa18.32■□□□□ 0.52
PRKN-204ENST00000366896 CHD1LQ86WJ1 897 aa18.32■□□□□ 0.52
PRKN-204ENST00000366896 MRPL50Q8N5N7 158 aaKnown RBP18.32■□□□□ 0.52
PRKN-204ENST00000366896 ZBTB7BO15156 539 aaPredicted RBP18.31■□□□□ 0.52
PRKN-204ENST00000366896 CABLES1Q8TDN4 633 aa18.31■□□□□ 0.52
PRKN-204ENST00000366896 ABCA3Q99758 1704 aa18.31■□□□□ 0.52
PRKN-204ENST00000366896 ELL2O00472 640 aaPredicted RBP18.31■□□□□ 0.52
PRKN-204ENST00000366896 RRP9O43818 475 aaKnown RBP18.31■□□□□ 0.52
PRKN-204ENST00000366896 HSP90AA1P07900 732 aaKnown RBP18.31■□□□□ 0.52
PRKN-204ENST00000366896 IL13P35225 146 aa18.31■□□□□ 0.52
PRKN-204ENST00000366896 KIF24Q5T7B8 1368 aa18.31■□□□□ 0.52
PRKN-204ENST00000366896 LMOD3Q0VAK6 560 aa18.3■□□□□ 0.52
PRKN-204ENST00000366896 MBIPQ9NS73 344 aa18.3■□□□□ 0.52
PRKN-204ENST00000366896 FLT4P35916 1363 aa18.3■□□□□ 0.52
PRKN-204ENST00000366896 DDIT3P35638 169 aa18.29■□□□□ 0.52
PRKN-204ENST00000366896 ABCC4O15439 1325 aa18.29■□□□□ 0.52
PRKN-204ENST00000366896 AMPHP49418 695 aa18.29■□□□□ 0.52
PRKN-204ENST00000366896 HSP90AA2PQ14568 343 aaPredicted RBP18.29■□□□□ 0.52
PRKN-204ENST00000366896 ARHGEF25Q86VW2 580 aa18.29■□□□□ 0.52
PRKN-204ENST00000366896 HSCBQ8IWL3 235 aa18.29■□□□□ 0.52
PRKN-204ENST00000366896 COL22A1Q8NFW1 1626 aaPredicted RBP18.29■□□□□ 0.52
PRKN-204ENST00000366896 RTL1A6NKG5 1358 aa18.28■□□□□ 0.52
PRKN-204ENST00000366896 HSP90AB2PQ58FF8 381 aa18.28■□□□□ 0.52
PRKN-204ENST00000366896 ESPNB1AK53 854 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms