RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 PUS7Q96PZ0 661 aaKnown RBP12.94□□□□□ -0.34
CDC42BPA-205ENST00000366769 GABPB1Q06547 395 aaPredicted RBP12.93□□□□□ -0.34
CDC42BPA-205ENST00000366769 CKAP2LQ8IYA6 745 aa12.93□□□□□ -0.34
CDC42BPA-205ENST00000366769 CCDC181Q5TID7 509 aa12.93□□□□□ -0.34
CDC42BPA-205ENST00000366769 WDR33Q9C0J8 1336 aaKnown RBP12.93□□□□□ -0.34
CDC42BPA-205ENST00000366769 URI1O94763 535 aaPredicted RBP12.93□□□□□ -0.34
CDC42BPA-205ENST00000366769 IQCEQ6IPM2 695 aa12.93□□□□□ -0.34
CDC42BPA-205ENST00000366769 CEP57L1Q8IYX8 460 aa12.93□□□□□ -0.34
CDC42BPA-205ENST00000366769 SECISBP2LQ93073 1101 aaKnown RBP12.93□□□□□ -0.34
CDC42BPA-205ENST00000366769 ZNHIT6Q9NWK9 470 aaKnown RBP12.93□□□□□ -0.34
CDC42BPA-205ENST00000366769 PAIP2Q9BPZ3 127 aaKnown RBP12.93□□□□□ -0.34
CDC42BPA-205ENST00000366769 RNF216Q9NWF9 866 aaPredicted RBP12.93□□□□□ -0.34
CDC42BPA-205ENST00000366769 WIZO95785 1651 aa12.93□□□□□ -0.34
CDC42BPA-205ENST00000366769 BCAR3O75815 825 aa12.92□□□□□ -0.34
CDC42BPA-205ENST00000366769 MAP9Q49MG5 647 aa12.92□□□□□ -0.34
CDC42BPA-205ENST00000366769 PHACTR2O75167 634 aa12.92□□□□□ -0.34
CDC42BPA-205ENST00000366769 TXLNAP40222 546 aa12.92□□□□□ -0.34
CDC42BPA-205ENST00000366769 DHX8Q14562 1220 aaKnown RBP12.92□□□□□ -0.34
CDC42BPA-205ENST00000366769 CEP63Q96MT8 703 aa12.92□□□□□ -0.34
CDC42BPA-205ENST00000366769 ARHGAP29Q52LW3 1261 aa12.92□□□□□ -0.34
CDC42BPA-205ENST00000366769 AIMP1Q12904 312 aaKnown RBP12.92□□□□□ -0.34
CDC42BPA-205ENST00000366769 SUDS3Q9H7L9 328 aaPredicted RBP12.91□□□□□ -0.34
CDC42BPA-205ENST00000366769 KIF27Q86VH2 1401 aa12.91□□□□□ -0.34
CDC42BPA-205ENST00000366769 TRAK1Q9UPV9 953 aa12.91□□□□□ -0.34
CDC42BPA-205ENST00000366769 MYH10P35580 1976 aa12.91□□□□□ -0.34
CDC42BPA-205ENST00000366769 ZBTB22O15209 634 aa12.91□□□□□ -0.34
CDC42BPA-205ENST00000366769 RSRC1Q96IZ7 334 aaKnown RBP12.91□□□□□ -0.34
CDC42BPA-205ENST00000366769 STAC3Q96MF2 364 aa12.91□□□□□ -0.34
CDC42BPA-205ENST00000366769 DDX58O95786 925 aaKnown RBP12.91□□□□□ -0.34
CDC42BPA-205ENST00000366769 HCLS1P14317 486 aaPredicted RBP12.91□□□□□ -0.34
CDC42BPA-205ENST00000366769 SMTNL1A8MU46 457 aa12.91□□□□□ -0.34
CDC42BPA-205ENST00000366769 ME1P48163 572 aa12.91□□□□□ -0.34
CDC42BPA-205ENST00000366769 NEK11Q8NG66 645 aa12.91□□□□□ -0.34
CDC42BPA-205ENST00000366769 LOC102724159A0A0B4J2E5 919 aa12.9□□□□□ -0.34
CDC42BPA-205ENST00000366769 BAG4O95429 457 aaKnown RBP12.9□□□□□ -0.34
CDC42BPA-205ENST00000366769 PWP2Q15269 919 aaKnown RBP12.9□□□□□ -0.34
CDC42BPA-205ENST00000366769 MYRIPQ8NFW9 859 aa12.9□□□□□ -0.34
CDC42BPA-205ENST00000366769 PAXBP1Q9Y5B6 917 aa12.9□□□□□ -0.34
CDC42BPA-205ENST00000366769 CHMP4BP1P59074 171 aa12.9□□□□□ -0.34
CDC42BPA-205ENST00000366769 DNAJC21Q5F1R6 531 aaKnown RBP12.9□□□□□ -0.34
CDC42BPA-205ENST00000366769 GDPD2Q9HCC8 539 aa12.9□□□□□ -0.34
CDC42BPA-205ENST00000366769 SETSIPP0DME0 302 aa12.9□□□□□ -0.34
CDC42BPA-205ENST00000366769 CCDC171Q6TFL3 1326 aa12.9□□□□□ -0.34
CDC42BPA-205ENST00000366769 TANGO6Q9C0B7 1094 aa12.9□□□□□ -0.34
CDC42BPA-205ENST00000366769 HSPA4P34932 840 aa12.9□□□□□ -0.34
CDC42BPA-205ENST00000366769 STK3Q13188 491 aa12.9□□□□□ -0.35
CDC42BPA-205ENST00000366769 ELF2Q15723 593 aa12.9□□□□□ -0.35
CDC42BPA-205ENST00000366769 FEZ1Q99689 392 aa12.9□□□□□ -0.35
CDC42BPA-205ENST00000366769 COG3Q96JB2 828 aa12.89□□□□□ -0.35
CDC42BPA-205ENST00000366769 SPATA32Q96LK8 384 aa12.89□□□□□ -0.35
CDC42BPA-205ENST00000366769 UPF3BQ9BZI7 483 aaKnown RBP12.89□□□□□ -0.35
CDC42BPA-205ENST00000366769 TTC16Q8NEE8 873 aa12.89□□□□□ -0.35
CDC42BPA-205ENST00000366769 FKBP5Q13451 457 aaPredicted RBP12.89□□□□□ -0.35
CDC42BPA-205ENST00000366769 ANAPC15P60006 121 aa12.88□□□□□ -0.35
CDC42BPA-205ENST00000366769 ZNF622Q969S3 477 aaKnown RBP eCLIP12.88□□□□□ -0.353e-7■■□□□ 13.1
CDC42BPA-205ENST00000366769 CCDC121Q6ZUS5 278 aa12.88□□□□□ -0.35
CDC42BPA-205ENST00000366769 RABEP2Q9H5N1 569 aa12.88□□□□□ -0.35
CDC42BPA-205ENST00000366769 RIOK3O14730 519 aaKnown RBP12.88□□□□□ -0.35
CDC42BPA-205ENST00000366769 PRIM1P49642 420 aaKnown RBP12.88□□□□□ -0.35
CDC42BPA-205ENST00000366769 GCKP35557 465 aa12.88□□□□□ -0.35
CDC42BPA-205ENST00000366769 RIC3Q7Z5B4 369 aa12.88□□□□□ -0.35
CDC42BPA-205ENST00000366769 ADAMTS8Q9UP79 889 aa12.88□□□□□ -0.35
CDC42BPA-205ENST00000366769 UTP14CQ5TAP6 766 aaKnown RBP12.88□□□□□ -0.35
CDC42BPA-205ENST00000366769 SART3Q15020 963 aaKnown RBP12.88□□□□□ -0.35
CDC42BPA-205ENST00000366769 STK38Q15208 465 aa12.88□□□□□ -0.35
CDC42BPA-205ENST00000366769 TMC6Q7Z403 805 aa12.87□□□□□ -0.35
CDC42BPA-205ENST00000366769 ZNF428Q96B54 188 aa12.87□□□□□ -0.35
CDC42BPA-205ENST00000366769 NOL7Q9UMY1 257 aaKnown RBP12.87□□□□□ -0.35
CDC42BPA-205ENST00000366769 MYO10Q9HD67 2058 aa12.87□□□□□ -0.35
CDC42BPA-205ENST00000366769 MAATS1Q7Z4T9 603 aa12.87□□□□□ -0.35
CDC42BPA-205ENST00000366769 PIBF1Q8WXW3 757 aa12.87□□□□□ -0.35
CDC42BPA-205ENST00000366769 UACAQ9BZF9 1416 aa12.87□□□□□ -0.35
CDC42BPA-205ENST00000366769 RAPGEF2Q9Y4G8 1499 aa12.87□□□□□ -0.35
CDC42BPA-205ENST00000366769 FAM160A1Q05DH4 1040 aa12.87□□□□□ -0.35
CDC42BPA-205ENST00000366769 CCDC113Q9H0I3 377 aa12.87□□□□□ -0.35
CDC42BPA-205ENST00000366769 ARFGAP3Q9NP61 516 aa12.87□□□□□ -0.35
CDC42BPA-205ENST00000366769 CBFA2T2O43439 604 aa12.86□□□□□ -0.35
CDC42BPA-205ENST00000366769 GRIPAP1Q4V328 841 aa12.86□□□□□ -0.35
CDC42BPA-205ENST00000366769 TEX2Q8IWB9 1127 aa12.86□□□□□ -0.35
CDC42BPA-205ENST00000366769 ERC2O15083 957 aa12.86□□□□□ -0.35
CDC42BPA-205ENST00000366769 DNA2P51530 1060 aa12.86□□□□□ -0.35
CDC42BPA-205ENST00000366769 CCDC148Q8NFR7 591 aa12.86□□□□□ -0.35
CDC42BPA-205ENST00000366769 LUC7LQ9NQ29 371 aaKnown RBP12.86□□□□□ -0.35
CDC42BPA-205ENST00000366769 STIM1Q13586 685 aa12.86□□□□□ -0.35
CDC42BPA-205ENST00000366769 PPM1EQ8WY54 764 aa12.86□□□□□ -0.35
CDC42BPA-205ENST00000366769 PRDM2Q13029 1718 aa12.86□□□□□ -0.35
CDC42BPA-205ENST00000366769 NINLQ9Y2I6 1382 aa12.86□□□□□ -0.35
CDC42BPA-205ENST00000366769 PSME1Q06323 249 aa12.85□□□□□ -0.35
CDC42BPA-205ENST00000366769 TPX2Q9ULW0 747 aaKnown RBP12.85□□□□□ -0.35
CDC42BPA-205ENST00000366769 SLC3A2P08195 630 aaKnown RBP12.85□□□□□ -0.35
CDC42BPA-205ENST00000366769 PEX19P40855 299 aa12.85□□□□□ -0.35
CDC42BPA-205ENST00000366769 BUB1BO60566 1050 aaPredicted RBP12.85□□□□□ -0.35
CDC42BPA-205ENST00000366769 AP1ARQ63HQ0 302 aa12.85□□□□□ -0.35
CDC42BPA-205ENST00000366769 E2F4Q16254 413 aa12.85□□□□□ -0.35
CDC42BPA-205ENST00000366769 HS1BP3Q53T59 392 aa12.85□□□□□ -0.35
CDC42BPA-205ENST00000366769 SERPINA10Q9UK55 444 aa12.85□□□□□ -0.35
CDC42BPA-205ENST00000366769 POTEB2H3BUK9 544 aa12.85□□□□□ -0.35
CDC42BPA-205ENST00000366769 KRT85P78386 507 aa12.85□□□□□ -0.35
CDC42BPA-205ENST00000366769 GBP3Q9H0R5 595 aa12.85□□□□□ -0.35
CDC42BPA-205ENST00000366769 KIF5CO60282 957 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms