RNA–Protein interactions for RNA: ENST00000361655.6

PCDH11X-202, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-202ENST00000361655 TRIM35Q9UPQ4 493 aa6.83□□□□□ -1.32
PCDH11X-202ENST00000361655 SURF6O75683 361 aaKnown RBP6.83□□□□□ -1.32
PCDH11X-202ENST00000361655 FAM135BQ49AJ0 1406 aa6.83□□□□□ -1.32
PCDH11X-202ENST00000361655 BICDL1Q6ZP65 573 aa6.83□□□□□ -1.32
PCDH11X-202ENST00000361655 BRINP3Q76B58 766 aa6.83□□□□□ -1.32
PCDH11X-202ENST00000361655 HDAC5Q9UQL6 1122 aa6.83□□□□□ -1.32
PCDH11X-202ENST00000361655 NKTRP30414 1462 aaKnown RBP6.83□□□□□ -1.32
PCDH11X-202ENST00000361655 ADAMTS13Q76LX8 1427 aa6.83□□□□□ -1.32
PCDH11X-202ENST00000361655 SRCIN1Q9C0H9 1055 aa6.83□□□□□ -1.32
PCDH11X-202ENST00000361655 SIL1Q9H173 461 aa6.83□□□□□ -1.32
PCDH11X-202ENST00000361655 NAP1L2Q9ULW6 460 aaPredicted RBP6.83□□□□□ -1.32
PCDH11X-202ENST00000361655 SBNO1A3KN83 1393 aa6.83□□□□□ -1.32
PCDH11X-202ENST00000361655 PREX1Q8TCU6 1659 aa6.83□□□□□ -1.32
PCDH11X-202ENST00000361655 USP6P35125 1406 aa6.83□□□□□ -1.32
PCDH11X-202ENST00000361655 MROH1Q8NDA8 1641 aa6.82□□□□□ -1.32
PCDH11X-202ENST00000361655 FRAT2O75474 233 aaPredicted RBP6.82□□□□□ -1.32
PCDH11X-202ENST00000361655 IL2RBP14784 551 aa6.82□□□□□ -1.32
PCDH11X-202ENST00000361655 PDE4AP27815 886 aa6.82□□□□□ -1.32
PCDH11X-202ENST00000361655 ZBTB3Q9H5J0 574 aa6.82□□□□□ -1.32
PCDH11X-202ENST00000361655 KIAA0232Q92628 1395 aa6.82□□□□□ -1.32
PCDH11X-202ENST00000361655 FGD1P98174 961 aa6.82□□□□□ -1.32
PCDH11X-202ENST00000361655 G3BP1Q13283 466 aaKnown RBP eCLIP6.82□□□□□ -1.32
PCDH11X-202ENST00000361655 DDB1Q16531 1140 aa6.82□□□□□ -1.32
PCDH11X-202ENST00000361655 LARP1Q6PKG0 1096 aaKnown RBP6.82□□□□□ -1.32
PCDH11X-202ENST00000361655 KLHL34Q8N239 644 aa6.82□□□□□ -1.32
PCDH11X-202ENST00000361655 NEUROD6Q96NK8 337 aa6.82□□□□□ -1.32
PCDH11X-202ENST00000361655 ATP5J2-PTCD1G3V325 749 aa6.81□□□□□ -1.32
PCDH11X-202ENST00000361655 CT47B1P0C2W7 299 aaPredicted RBP6.81□□□□□ -1.32
PCDH11X-202ENST00000361655 FLIIQ13045 1269 aa6.81□□□□□ -1.32
PCDH11X-202ENST00000361655 BECN1Q14457 450 aa6.81□□□□□ -1.32
PCDH11X-202ENST00000361655 AKAP4Q5JQC9 854 aa6.81□□□□□ -1.32
PCDH11X-202ENST00000361655 PDZRN3Q9UPQ7 1066 aa6.81□□□□□ -1.32
PCDH11X-202ENST00000361655 PTPRUQ92729 1446 aa6.81□□□□□ -1.32
PCDH11X-202ENST00000361655 GNAI3P08754 354 aa6.81□□□□□ -1.32
PCDH11X-202ENST00000361655 CHPF2Q9P2E5 772 aa6.81□□□□□ -1.32
PCDH11X-202ENST00000361655 VWDEQ8N2E2 1590 aa6.81□□□□□ -1.32
PCDH11X-202ENST00000361655 PIK3R4Q99570 1358 aa6.81□□□□□ -1.32
PCDH11X-202ENST00000361655 PI4KAP2A4QPH2 592 aa6.81□□□□□ -1.32
PCDH11X-202ENST00000361655 GNAI2P04899 355 aa6.81□□□□□ -1.32
PCDH11X-202ENST00000361655 RLBP1P12271 317 aa6.81□□□□□ -1.32
PCDH11X-202ENST00000361655 KIF6Q6ZMV9 814 aa6.81□□□□□ -1.32
PCDH11X-202ENST00000361655 NOL8Q76FK4 1167 aaKnown RBP6.81□□□□□ -1.32
PCDH11X-202ENST00000361655 ARHGEF25Q86VW2 580 aa6.81□□□□□ -1.32
PCDH11X-202ENST00000361655 PI4KAP1Q8N8J0 262 aa6.81□□□□□ -1.32
PCDH11X-202ENST00000361655 EXOC6BQ9Y2D4 811 aa6.81□□□□□ -1.32
PCDH11X-202ENST00000361655 AXIN2Q9Y2T1 843 aa6.81□□□□□ -1.32
PCDH11X-202ENST00000361655 VAMP4O75379 141 aa6.8□□□□□ -1.32
PCDH11X-202ENST00000361655 GPTP24298 496 aa6.8□□□□□ -1.32
PCDH11X-202ENST00000361655 SLC4A3P48751 1232 aa6.8□□□□□ -1.32
PCDH11X-202ENST00000361655 FAM98CQ17RN3 349 aaKnown RBP6.8□□□□□ -1.32
PCDH11X-202ENST00000361655 FMNL2Q96PY5 1086 aa6.8□□□□□ -1.32
PCDH11X-202ENST00000361655 MYD88Q99836 296 aa6.8□□□□□ -1.32
PCDH11X-202ENST00000361655 IFIT2P09913 472 aaKnown RBP6.8□□□□□ -1.32
PCDH11X-202ENST00000361655 KIAA1211Q6ZU35 1233 aa6.8□□□□□ -1.32
PCDH11X-202ENST00000361655 IL1RAPL2Q9NP60 686 aa6.8□□□□□ -1.32
PCDH11X-202ENST00000361655 MROH2AA6NES4 1674 aa6.8□□□□□ -1.32
PCDH11X-202ENST00000361655 SRGAP3O43295 1099 aa6.8□□□□□ -1.32
PCDH11X-202ENST00000361655 KCNQ3O43525 872 aa6.8□□□□□ -1.32
PCDH11X-202ENST00000361655 CCDC27Q2M243 656 aa6.8□□□□□ -1.32
PCDH11X-202ENST00000361655 FAM182BQ5T319 152 aa6.8□□□□□ -1.32
PCDH11X-202ENST00000361655 DEPDC5O75140 1603 aa6.8□□□□□ -1.32
PCDH11X-202ENST00000361655 RNMTO43148 476 aaKnown RBP6.79□□□□□ -1.32
PCDH11X-202ENST00000361655 STARD3NLO95772 234 aa6.79□□□□□ -1.32
PCDH11X-202ENST00000361655 CCT4P50991 539 aaKnown RBP6.79□□□□□ -1.32
PCDH11X-202ENST00000361655 FAM161AQ3B820 660 aa6.79□□□□□ -1.32
PCDH11X-202ENST00000361655 DBF4Q9UBU7 674 aaPredicted RBP6.79□□□□□ -1.32
PCDH11X-202ENST00000361655 TULP4Q9NRJ4 1543 aa6.79□□□□□ -1.32
PCDH11X-202ENST00000361655 ALDH1L2Q3SY69 923 aa6.79□□□□□ -1.32
PCDH11X-202ENST00000361655 IL17REQ8NFR9 667 aa6.79□□□□□ -1.32
PCDH11X-202ENST00000361655 DDRGK1Q96HY6 314 aa6.79□□□□□ -1.32
PCDH11X-202ENST00000361655 G2E3Q7L622 706 aa6.79□□□□□ -1.32
PCDH11X-202ENST00000361655 GPATCH3Q96I76 525 aa6.79□□□□□ -1.32
PCDH11X-202ENST00000361655 PHAXQ9H814 394 aaKnown RBP6.79□□□□□ -1.32
PCDH11X-202ENST00000361655 FOXD4L1Q9NU39 408 aa6.79□□□□□ -1.32
PCDH11X-202ENST00000361655 SMARCA5O60264 1052 aaPredicted RBP6.78□□□□□ -1.32
PCDH11X-202ENST00000361655 COPS6Q7L5N1 327 aa6.78□□□□□ -1.32
PCDH11X-202ENST00000361655 SLKQ9H2G2 1235 aaPredicted RBP6.78□□□□□ -1.32
PCDH11X-202ENST00000361655 MAP3K2Q9Y2U5 619 aa6.78□□□□□ -1.32
PCDH11X-202ENST00000361655 ARHGEF10O15013 1369 aa6.78□□□□□ -1.32
PCDH11X-202ENST00000361655 MAP3K5Q99683 1374 aa6.78□□□□□ -1.32
PCDH11X-202ENST00000361655 ATP7BP35670 1465 aa6.78□□□□□ -1.32
PCDH11X-202ENST00000361655 SPATA31D1Q6ZQQ2 1576 aa6.78□□□□□ -1.32
PCDH11X-202ENST00000361655 QRICH2Q9H0J4 1663 aa6.78□□□□□ -1.32
PCDH11X-202ENST00000361655 DNAAF4Q8WXU2 420 aa6.78□□□□□ -1.32
PCDH11X-202ENST00000361655 IL16Q14005 1332 aa6.78□□□□□ -1.32
PCDH11X-202ENST00000361655 ADGRL3Q9HAR2 1447 aa6.78□□□□□ -1.32
PCDH11X-202ENST00000361655 TMEM131LA2VDJ0 1609 aa6.78□□□□□ -1.32
PCDH11X-202ENST00000361655 KIF13AQ9H1H9 1805 aa6.78□□□□□ -1.32
PCDH11X-202ENST00000361655 SNRPA1P09661 255 aaKnown RBP6.78□□□□□ -1.32
PCDH11X-202ENST00000361655 XAGE3Q8WTP9 111 aa6.78□□□□□ -1.32
PCDH11X-202ENST00000361655 PLEKHF1Q96S99 279 aa6.78□□□□□ -1.32
PCDH11X-202ENST00000361655 PPP1R1BQ9UD71 204 aaPredicted RBP6.78□□□□□ -1.32
PCDH11X-202ENST00000361655 FER1L4A9Z1Z3 1794 aa6.78□□□□□ -1.32
PCDH11X-202ENST00000361655 ZC3H13Q5T200 1668 aaKnown RBP6.78□□□□□ -1.32
PCDH11X-202ENST00000361655 MAP4K4O95819 1239 aaPredicted RBP6.78□□□□□ -1.32
PCDH11X-202ENST00000361655 MEIS3Q99687 375 aa6.78□□□□□ -1.32
PCDH11X-202ENST00000361655 LRRFIP2Q9Y608 721 aaKnown RBP6.78□□□□□ -1.32
PCDH11X-202ENST00000361655 G3V3G9 751 aa6.77□□□□□ -1.33
PCDH11X-202ENST00000361655 PHF14O94880 888 aa6.77□□□□□ -1.33
PCDH11X-202ENST00000361655 IGHDP01880 384 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms