RNA–Protein interactions for RNA: ENST00000361293.9

CHD1L-201, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2 BASIC

Gene CHD1L, Length 2,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-201ENST00000361293 LNPKQ9C0E8 428 aa25.32■■□□□ 1.64
CHD1L-201ENST00000361293 NWD1Q149M9 1564 aa25.32■■□□□ 1.64
CHD1L-201ENST00000361293 KIAA0232Q92628 1395 aa25.32■■□□□ 1.64
CHD1L-201ENST00000361293 RGS12O14924 1447 aa25.31■■□□□ 1.64
CHD1L-201ENST00000361293 LTV1Q96GA3 475 aaPredicted RBP25.3■■□□□ 1.64
CHD1L-201ENST00000361293 RTL5Q5HYW3 569 aaPredicted RBP25.29■■□□□ 1.64
CHD1L-201ENST00000361293 RTF1Q92541 710 aaKnown RBP25.29■■□□□ 1.64
CHD1L-201ENST00000361293 CHD1LQ86WJ1 897 aa25.28■■□□□ 1.64
CHD1L-201ENST00000361293 TBC1D32Q96NH3 1257 aa25.28■■□□□ 1.64
CHD1L-201ENST00000361293 CHMP4BQ9H444 224 aaKnown RBP25.28■■□□□ 1.64
CHD1L-201ENST00000361293 ADGRL3Q9HAR2 1447 aa25.27■■□□□ 1.64
CHD1L-201ENST00000361293 SETD1BQ9UPS6 1966 aaKnown RBP25.27■■□□□ 1.64
CHD1L-201ENST00000361293 KIF24Q5T7B8 1368 aa25.27■■□□□ 1.64
CHD1L-201ENST00000361293 TSPYL4Q9UJ04 414 aa25.27■■□□□ 1.64
CHD1L-201ENST00000361293 GAS2L2Q8NHY3 880 aa25.26■■□□□ 1.63
CHD1L-201ENST00000361293 LTN1O94822 1766 aa25.26■■□□□ 1.63
CHD1L-201ENST00000361293 ESCO1Q5FWF5 840 aa25.25■■□□□ 1.63
CHD1L-201ENST00000361293 INTS3Q68E01 1043 aaKnown RBP25.25■■□□□ 1.63
CHD1L-201ENST00000361293 ANKRD45Q5TZF3 282 aa25.24■■□□□ 1.63
CHD1L-201ENST00000361293 USHBP1Q8N6Y0 703 aa25.24■■□□□ 1.63
CHD1L-201ENST00000361293 UPF2Q9HAU5 1272 aaKnown RBP25.24■■□□□ 1.63
CHD1L-201ENST00000361293 DEKP35659 375 aaKnown RBP25.24■■□□□ 1.63
CHD1L-201ENST00000361293 HAP1P54257 671 aaPredicted RBP25.24■■□□□ 1.63
CHD1L-201ENST00000361293 GCC1Q96CN9 775 aa25.23■■□□□ 1.63
CHD1L-201ENST00000361293 NPHP4O75161 1426 aaPredicted RBP25.23■■□□□ 1.63
CHD1L-201ENST00000361293 LRRC37A3O60309 1634 aa25.23■■□□□ 1.63
CHD1L-201ENST00000361293 SLC4A2P04920 1241 aa25.22■■□□□ 1.63
CHD1L-201ENST00000361293 NFAT5O94916 1531 aa25.21■■□□□ 1.63
CHD1L-201ENST00000361293 MSH6P52701 1360 aa25.21■■□□□ 1.63
CHD1L-201ENST00000361293 MFAP1P55081 439 aaKnown RBP25.21■■□□□ 1.63
CHD1L-201ENST00000361293 G2E3Q7L622 706 aa25.2■■□□□ 1.62
CHD1L-201ENST00000361293 GNAT3A8MTJ3 354 aa25.2■■□□□ 1.62
CHD1L-201ENST00000361293 PSME1Q06323 249 aa25.2■■□□□ 1.62
CHD1L-201ENST00000361293 PTPRCP08575 1304 aa25.19■■□□□ 1.62
CHD1L-201ENST00000361293 RTL1A6NKG5 1358 aa25.19■■□□□ 1.62
CHD1L-201ENST00000361293 ORAI2Q96SN7 254 aa25.19■■□□□ 1.62
CHD1L-201ENST00000361293 IL17REQ8NFR9 667 aa25.18■■□□□ 1.62
CHD1L-201ENST00000361293 ATP10DQ9P241 1426 aa25.18■■□□□ 1.62
CHD1L-201ENST00000361293 XPCQ01831 940 aaPredicted RBP25.18■■□□□ 1.62
CHD1L-201ENST00000361293 HTATSF1O43719 755 aaKnown RBP25.17■■□□□ 1.62
CHD1L-201ENST00000361293 IP6K1Q92551 441 aa25.17■■□□□ 1.62
CHD1L-201ENST00000361293 MAP3K5Q99683 1374 aa25.16■■□□□ 1.62
CHD1L-201ENST00000361293 NFKBIBQ15653 356 aa25.16■■□□□ 1.62
CHD1L-201ENST00000361293 ZBTB7CA1YPR0 619 aa25.15■■□□□ 1.62
CHD1L-201ENST00000361293 MEIS3Q99687 375 aa25.15■■□□□ 1.62
CHD1L-201ENST00000361293 USP35Q9P2H5 1018 aa25.15■■□□□ 1.62
CHD1L-201ENST00000361293 F6X3S4 739 aa25.15■■□□□ 1.62
CHD1L-201ENST00000361293 PLEKHG5O94827 1062 aa25.14■■□□□ 1.62
CHD1L-201ENST00000361293 NBPF6Q5VWK0 638 aa25.14■■□□□ 1.62
CHD1L-201ENST00000361293 NBPF4Q96M43 638 aa25.14■■□□□ 1.62
CHD1L-201ENST00000361293 C22orf23Q9BZE7 217 aa25.14■■□□□ 1.62
CHD1L-201ENST00000361293 BECN1Q14457 450 aa25.13■■□□□ 1.61
CHD1L-201ENST00000361293 BMP2KLQ5H9B9 411 aa25.13■■□□□ 1.61
CHD1L-201ENST00000361293 RGPD2P0DJD1 1756 aa25.13■■□□□ 1.61
CHD1L-201ENST00000361293 CEP85Q6P2H3 762 aa25.12■■□□□ 1.61
CHD1L-201ENST00000361293 ANKRD44Q8N8A2 993 aa25.12■■□□□ 1.61
CHD1L-201ENST00000361293 NECTIN2Q92692 538 aa25.11■■□□□ 1.61
CHD1L-201ENST00000361293 TBC1D2Q9BYX2 928 aa25.11■■□□□ 1.61
CHD1L-201ENST00000361293 DCTPP1Q9H773 170 aa25.11■■□□□ 1.61
CHD1L-201ENST00000361293 FAM208AQ9UK61 1670 aaKnown RBP25.1■■□□□ 1.61
CHD1L-201ENST00000361293 SLC4A10Q6U841 1118 aa25.1■■□□□ 1.61
CHD1L-201ENST00000361293 LRRC59Q96AG4 307 aaKnown RBP25.1■■□□□ 1.61
CHD1L-201ENST00000361293 BCL11AQ9H165 835 aa25.1■■□□□ 1.61
CHD1L-201ENST00000361293 KCNH5Q8NCM2 988 aa25.08■■□□□ 1.61
CHD1L-201ENST00000361293 TAF7Q15545 349 aaPredicted RBP25.08■■□□□ 1.61
CHD1L-201ENST00000361293 SLKQ9H2G2 1235 aaPredicted RBP25.08■■□□□ 1.61
CHD1L-201ENST00000361293 RPAP2Q8IXW5 612 aaPredicted RBP25.07■■□□□ 1.6
CHD1L-201ENST00000361293 STK31Q9BXU1 1019 aa25.07■■□□□ 1.6
CHD1L-201ENST00000361293 PHRF1Q9P1Y6 1649 aaKnown RBP25.06■■□□□ 1.6
CHD1L-201ENST00000361293 GCP02774 474 aa25.06■■□□□ 1.6
CHD1L-201ENST00000361293 LMOD2Q6P5Q4 547 aa25.06■■□□□ 1.6
CHD1L-201ENST00000361293 C16orf71Q8IYS4 520 aaPredicted RBP25.05■■□□□ 1.6
CHD1L-201ENST00000361293 FLIIQ13045 1269 aa25.05■■□□□ 1.6
CHD1L-201ENST00000361293 PROSER2Q86WR7 435 aaPredicted RBP25.05■■□□□ 1.6
CHD1L-201ENST00000361293 PLEKHM2Q8IWE5 1019 aa25.05■■□□□ 1.6
CHD1L-201ENST00000361293 FRAT2O75474 233 aaPredicted RBP25.04■■□□□ 1.6
CHD1L-201ENST00000361293 CCDC30Q5VVM6 783 aa25.04■■□□□ 1.6
CHD1L-201ENST00000361293 LGR6Q9HBX8 967 aa25.04■■□□□ 1.6
CHD1L-201ENST00000361293 CEMIPQ8WUJ3 1361 aa25.04■■□□□ 1.6
CHD1L-201ENST00000361293 GSPT1P15170 499 aaKnown RBP25.04■■□□□ 1.6
CHD1L-201ENST00000361293 ARHGEF25Q86VW2 580 aa25.03■■□□□ 1.6
CHD1L-201ENST00000361293 OTUD7AQ8TE49 926 aaPredicted RBP25.03■■□□□ 1.6
CHD1L-201ENST00000361293 SLIT3O75094 1523 aa25.03■■□□□ 1.6
CHD1L-201ENST00000361293 CCT4P50991 539 aaKnown RBP25.03■■□□□ 1.6
CHD1L-201ENST00000361293 TBC1D9Q6ZT07 1266 aa25.03■■□□□ 1.6
CHD1L-201ENST00000361293 APBB1O00213 710 aa25.02■■□□□ 1.6
CHD1L-201ENST00000361293 FKBP5Q13451 457 aaPredicted RBP25.02■■□□□ 1.6
CHD1L-201ENST00000361293 ANTXR1Q9H6X2 564 aa25.02■■□□□ 1.6
CHD1L-201ENST00000361293 TRPM3Q9HCF6 1732 aaPredicted RBP25.02■■□□□ 1.6
CHD1L-201ENST00000361293 SMARCA5O60264 1052 aaPredicted RBP25.01■■□□□ 1.59
CHD1L-201ENST00000361293 MED1Q15648 1581 aaPredicted RBP25.01■■□□□ 1.59
CHD1L-201ENST00000361293 BABAM1Q9NWV8 329 aa25■■□□□ 1.59
CHD1L-201ENST00000361293 RBM25P49756 843 aaKnown RBP25■■□□□ 1.59
CHD1L-201ENST00000361293 C1orf167Q5SNV9 1468 aa24.99■■□□□ 1.59
CHD1L-201ENST00000361293 SPRYD3Q8NCJ5 442 aa24.99■■□□□ 1.59
CHD1L-201ENST00000361293 KRT28Q7Z3Y7 464 aa24.98■■□□□ 1.59
CHD1L-201ENST00000361293 AXIN2Q9Y2T1 843 aa24.98■■□□□ 1.59
CHD1L-201ENST00000361293 PXDNQ92626 1479 aa24.98■■□□□ 1.59
CHD1L-201ENST00000361293 CACNA1FO60840 1977 aa24.97■■□□□ 1.59
CHD1L-201ENST00000361293 HDGFL1Q5TGJ6 251 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms